A fully adaptive multiresolution scheme for shock computations

The scheme is based on Ami Harten's ideas (Harten, 1994), the main tools coming from wavelet theory, in the framework of multiresolution analysis for cell averages. But instead of evolving cell averages on the finest uniform level, we propose to evolve just the cell averages on the grid determined by the significant wavelet coefficients. Typically, there are few cells in each time step, big cells on smooth regions, and smaller ones close to irregularities of the solution. For the numerical flux, we use a simple uniform central finite difference scheme, adapted to the size of each cell. If any of the required neighboring cell averages is not present, it is interpolated from coarser scales. But we switch to ENO scheme in the finest part of the grids. To show the feasibility and efficiency of the method, it is applied to a system arising in polymer-flooding of an oil reservoir. In terms of CPU time and memory requirements, it outperforms Harten's multiresolution algorithm.The proposed method applies to systems of conservation laws in 1Dpartial derivative(t)u(x, t) + partial derivative(x)f(u(x, t)) = 0, u(x, t) is an element of R-m. (1)In the spirit of finite volume methods, we shall consider the explicit schemeupsilon(mu)(n+1) = upsilon(mu)(n) - Deltat/hmu ((f) over bar (mu) - (f) over bar (mu)-) = [Dupsilon(n)](mu), (2)where mu is a point of an irregular grid Gamma, mu(-) is the left neighbor of A in Gamma, upsilon(mu)(n) approximate to 1/mu-mu(-) integral(mu-)(mu) u(x, t(n))dx are approximated cell averages of the solution, (f) over bar (mu) = (f) over bar (mu)(upsilon(n)) are the numerical fluxes, and D is the numerical evolution operator of the scheme.According to the definition of (f) over bar (mu), several schemes of this type have been proposed and successfully applied (LeVeque, 1990). Godunov, Lax-Wendroff, and ENO are some of the popular names. Godunov scheme resolves well the shocks, but accuracy (of first order) is poor in smooth regions. Lax-Wendroff is of second order, but produces dangerous oscillations close to shocks. ENO schemes are good alternatives, with high order and without serious oscillations. But the price is high computational cost.Ami Harten proposed in (Harten, 1994) a simple strategy to save expensive ENO flux calculations. The basic tools come from multiresolution analysis for cell averages on uniform grids, and the principle is that wavelet coefficients can be used for the characterization of local smoothness.. Typically, only few wavelet coefficients are significant. At the finest level, they indicate discontinuity points, where ENO numerical fluxes are computed exactly. Elsewhere, cheaper fluxes can be safely used, or just interpolated from coarser scales. Different applications of this principle have been explored by several authors, see for example (G-Muller and Muller, 1998).Our scheme also uses Ami Harten's ideas. But instead of evolving the cell averages on the finest uniform level, we propose to evolve the cell averages on sparse grids associated with the significant wavelet coefficients. This means that the total number of cells is small, with big cells in smooth regions and smaller ones close to irregularities. This task requires improved new tools, which are described next.

Influência da turbidez da água do rio Tietê na ocorrência de plantas aquáticas

As plantas aquáticas são estudadas como um efeito do desequilíbrio causado pela poluição e/ou alagamento dos rios. A quantidade excessiva de plantas, conseqüente desse desequilíbrio, dificulta a navegação e a produção de energia elétrica. O objetivo deste trabalho foi identificar as principais plantas aquáticas do rio Tietê e relacioná-las com a turbidez da água dos diferentes reservatórios. Foram avaliados todos os focos de vegetação aquática emersa, flutuante e submersa, presentes em cada reservatório, em toda a sua extensão, sendo consideradas como importantes as espécies que apresentaram o caráter dominante. Foi observado que os represamentos apresentam problema de plantas aquáticas e a qualidade da infestação varia entre os reservatórios. Foram consideradas como dominantes as seguintes espécies: Brachiaria mutica, Brachiaria subquadripara, Eichhornia crassipes, Egeria densa, Egeria najas, Enidra sessilis e Typha angustifolia. Observou-se que houve uma tendência de maior ocorrência de plantas flutuantes e emersas (marginais) nos reservatórios com maior turbidez e de plantas submersas naqueles com menor turbidez. Para as duas braquiárias, observou-se que a freqüência das espécies aumentou com o aumento da turbidez até o limite de 34,93 NTU. O aguapé ocorreu com altos índices de freqüência (acima de 50%) em todos os reservatórios do rio Tietê, independentemente das características da água. em se tratando das egérias, a freqüência das espécies aumentou gradativamente com a redução da turbidez e a taboa não apresentou uma relação com o índice estudado. A espécie E. sessilis se mostrou bastante dependente da qualidade da água, tendo sua freqüência aumentada com o aumento da turbidez.

Seroprevalence of anti-Leptospira spp. antibodies in dogs in Bahia, Brazil

The aim of this study was to determine the prevalence of anti-Leptospira spp. antibodies in dogs living in the urban area of the city of Ilheus, Bahia, Brazil using the microscopic agglutination test (MAT) to investigate 24 serovars. A semi-structured questionnaire was administered to dog owners to collect data about demography, husbandry and environmental factors. The prevalence of anti-Leptospira spp. antibodies in the population of 282 dogs was 7.1% (95% confidence interval: 4.4-10.7%). Serovar Copenhageni was the most prevalent, followed by serovars Bratislava, Canicola and Gryppotyphosa. No risk factor was detected with regard to demography (age, gender and breed), husbandry (Leptospira vaccinations, food and water exposure through their environment, hunting habits, contact with other animals and contact with rats) and environmental factors (sewage network, garbage collection, history of flooding, river proximity and wastelands). Despite the low prevalence found in this study, the seroprevalence of Leptospira spp. in healthy dogs in Ilheus indicates the presence of this agent in the environment, which may be a source of human infection. Knowledge of the serovars present in this environment is important for understanding the epidemiology of leptospirosis and establishing public health policies aimed at its control. (C) 2012 Elsevier B.V. All rights reserved.

Spatial Distribution of Seropositive Dogs to Leptospira spp. and Evaluation of Leptospirosis Risk Factors Using a Decision Tree

Background: Leptospirosis is an important zoonotic disease associated with poor areas of urban settings of developing countries and early diagnosis and prompt treatment may prevent disease. Although rodents are reportedly considered the main reservoirs of leptospirosis, dogs may develop the disease, may become asymptomatic carriers and may be used as sentinels for disease epidemiology. The use of Geographical Information Systems (GIS) combined with spatial analysis techniques allows the mapping of the disease and the identification and assessment of health risk factors. Besides the use of GIS and spatial analysis, the technique of data mining, decision tree, can provide a great potential to find a pattern in the behavior of the variables that determine the occurrence of leptospirosis. The objective of the present study was to apply Geographical Information Systems and data prospection (decision tree) to evaluate the risk factors for canine leptospirosis in an area of Curitiba, PR.Materials, Methods & Results: The present study was performed on the Vila Pantanal, a urban poor community in the city of Curitiba. A total of 287 dog blood samples were randomly obtained house-by-house in a two-day sampling on January 2010. In addition, a questionnaire was applied to owners at the time of sampling. Geographical coordinates related to each household of tested dog were obtained using a Global Positioning System (GPS) for mapping the spatial distribution of reagent and non-reagent dogs to leptospirosis. For the decision tree, risk factors included results of microagglutination test (MAT) from the serum of dogs, previous disease on the household, contact with rats or other dogs, dog breed, outdoors access, feeding, trash around house or backyard, open sewer proximity and flooding. A total of 189 samples (about 2/3 of overall samples) were randomly selected for the training file and consequent decision rules. The remained 98 samples were used for the testing file. The seroprevalence showed a pattern of spatial distribution that involved all the Pantanal area, without agglomeration of reagent animals. In relation to data mining, from 189 samples used in decision tree, a total of 165 (87.3%) animal samples were correctly classified, generating a Kappa index of 0.413. A total of 154 out of 159 (96.8%) samples were considered non-reagent and were correctly classified and only 5/159 (3.2%) were wrongly identified. on the other hand, only 11 (36.7%) reagent samples were correctly classified, with 19 (63.3%) samples failing diagnosis.Discussion: The spatial distribution that involved all the Pantanal area showed that all the animals in the area are at risk of contamination by Leptospira spp. Although most samples had been classified correctly by the decision tree, a degree of difficulty of separability related to seropositive animals was observed, with only 36.7% of the samples classified correctly. This can occur due to the fact of seronegative animals number is superior to the number of seropositive ones, taking the differences in the pattern of variable behavior. The data mining helped to evaluate the most important risk factors for leptospirosis in an urban poor community of Curitiba. The variables selected by decision tree reflected the important factors about the existence of the disease (default of sewer, presence of rats and rubbish and dogs with free access to street). The analyses showed the multifactorial character of the epidemiology of canine leptospirosis.

Imbibition phases and germination response of Mimosa bimucronata (Fabaceae: Mimosoideae) to water submersion

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Actinopterygii, Siluriformes, Loricariidae, Loricariichthys platymetopon Isbrucker and Nijssen, 1979: first record in Reservoir of Canoas II, Middle Paranapanema River, border of the states of São Paulo and Parana, Brazil.

First record of the cascudo, Loricariichthys platymetopon Isbrucker and Nijssen, 1979 in Canoas II Reservoir (Middle Paranapanema River, border of the states of São Paulo and Parana, Brazil). Its occurrence is due to the flooding of Sete Quedas waterfall, as a result of the construction of Itaipu Reservoir. Furthermore, there is absence or low abundance of natural predators, like Salminus brasiliensis, since this species has difficulties to adapt or even survive in reservoirs.

Natural history of the South American water snake Helicops leopardinus (Colubridae : Hydropsini) in the pantanal, Central Brazil

The South American water snake Helicops leopardinus is very abundant in the Pantanal wetlands of Central Brazil. We studied the biology of this species based on specimens collected by local workers in the Paraguay River. Females attained greater body lengths and had larger heads than males, but the latter had longer tails. Helicops leopardinus fed on a wide variety of fishes (70% of the total prey items) and frogs, with fishes of the order Gymnotiformes (33.34%) and frogs of the family Hylidae (23.34%) representing the most common prey items. There was relatively lows diet overlap between the sexes and between juveniles and adults. Mean litter size was 6.6 and ranged from 4-11. The reproductive cycle was seasonal, with birth occurring late in the wet season (simultaneous with the flooding of the Paraguay River), facilitating dispersal of young snakes by floating vegetation. Floating vegetation may be a critical habitat for H. leopardinus, and management plans for their maintenance need to be developed.

Distribuição e abundância de espécies arbóreas em cerradões no Pantanal, Estado do Mato Grosso do Sul, Brasil

Os cerradões no Pantanal ocorrem em áreas não inundáveis da planície e são importantes para a economia regional. Das áreas de cerradão são retiradas madeiras para construção de cercas, currais e galpões. Apesar da grande importância dos recursos vegetais do cerradão, existem poucas informações para embasar sua conservação e uso sustentável. Este trabalho teve como objetivos estudar a abundância, a distribuição das espécies arbóreas e correlações com a fertilidade do solo em áreas de cerradão (savana florestada) do Pantanal Sul Mato-grossense. Foram estudadas seis áreas de cerradão na sub-região da Nhecolândia, por meio de 30 pontos quadrantes, totalizando 120 árvores amostradas, com circunferência a altura do peito (CAP) > 15 cm, em cada área. As comparações florísticas, de abundância das espécies e de fertilidade do solo, foram efetuadas por análises de componentes principais (PCA). As áreas mostraram-se heterogêneas, apresentando diferentes níveis de fertilidade do solo, estrutura e composição da vegetação. Dois cerradões foram agrupados em termos de fertilidade do solo e de estrutura da vegetação, apresentando muitas árvores de Qualea grandiflora Mart., espécie que ocorreu associada a solos com maiores teores de fósforo. Outros dois cerradões apresentaram composição florística mais semelhante que os demais, apesar de ocorrerem em solos com diferentes níveis de fertilidade, indicando perturbação antrópica.

Caracterização florística e fitossociológica do componente arbustivo-arbóreo de uma floresta paludosa no Município de Rio Claro (SP), Brasil

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Relação entre heterogeneidade ambiental e distribuição de espécies em uma floresta paludosa no Município de Cristais Paulista, SP, Brasil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Respostas morfológicas em Guibourtia hymenifolia (Moric.) J. Leonard (Fabaceae) e Genipa americana L. (Rubiaceae), submetidas ao estresse por deficiência nutricional e alagamento do substrato

Foram estudadas as respostas plásticas em duas espécies nativas. em G. hymenifolia, não foram verificadas modificações morfológicas significativas, exceto quanto ao conteúdo de amido de reserva, que foram menores nos lotes capacidade de campo desnutrido (CCD) e alagamento desnutrido (ALD). em Genipa americana os indivíduos do lote (CCN - capacidade de campo nutrido) exibiram raízes adventícias com aerênquima distinto, mais freqüentes nas plantas do lote controle submetidas ao alagamento (ALN - alagado nutrido). Nessa última espécie, nos lotes ALN, verificou-se o surgimento de aerênquima lisógeno no caule, além da hipertrofia lenticelar. A diversidade de respostas às condições de alagamento, aliada à uma larga ocorrência de populações de Genipa americana em áreas sazonalmente inundadas, como por exemplo no Pantanal de Miranda-MS, sugere um complexo de interações entre caractes adaptativos morfológicos e fisiológicos, sendo o potencial gênico fundamental neste tipo de resposta.

O aumento em superfície em Adelia membranifolia (Müll. Arg.) Pax & K. Hoffm. e Peltophorum dubium (Spreng.) Taub., em resposta ao estresse por deficiência nutricional e alagamento do substrato

Foram estudadas as respostas plásticas em plântulas e plantas jovens de duas espécies arbóreas nativas, Adelia membranifolia (Müll. Arg.) Pax & K. Hoffm. (Euphorbiaceae) e Peltophorum dubium (Spreng.) Taub. (Leguminosae-Caesalpinoidae), submetidas ao alagamento do substrado associado ao déficit nutricional. Avaliou-se o acréscimo em superfície no módulo de expressão, definido como a região do eixo da plântula que, sob condições de estresse, sofre rediferenciação sendo considerada a hipertrofia lenticelar como a expressão morfogenética mais comum. em A. membranifolia a associação do estresse nutricional e alagamento do substrato foi a condição mais restritiva tanto para o crescimento em altura e diâmetro do colo quanto para as expressões morfogenéticas. Já em P. dubium o estado nutricional foi mais restritivo que o alagamento para o crescimento do colo. em geral, para ambas as espécies, plantas nutridas mantidas alagadas restabeleceram seu ritmo de crescimento a partir do terceiro mês de tratamento, além de expressarem respostas plásticas como a hipertrofia lenticelar e a formação de raízes adventícias. Quanto ao aumento em superfície, nos lotes desnutridos, verificou-se que em A. membranifolia de um total de 38% de superfície expressa, 12% corresponderam à hipertrofia lenticelar. em P. dubium verificou-se as maiores variações de aumento em superfície expressa por hipertrofia lenticelar, elevando de 5% para 13%. em geral a superfície modular nos lotes tratados foi o dobro em relação ao controle. É possível que o aumento em superfície, para algumas espécies, seja significativo como tendência ao aumento da estabilidade no desenvolvimento a partir de interações fisiológicas.

Vegetation and environmental heterogeneity relationships in a Neotropical swamp forest in southeastern Brazil (Itirapina, SP)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

The specialized reproductive mode of the treefrog Aplastodiscus perviridis (Anura : Hylidae)

Males of the South American treefrog Aplastodiscus perviridis construct concealed subterranean nests. Using a complex courtship behavior that involves tactile stimuli and vocalizations, males guide the females to the subterranean nests where eggs are laid. Embryos and facultatively oophagous tadpoles (at least in stage 25) stay in subterranean nests until flooding transports them to ponds or streams. This is a rare reproductive mode previously known for few species in the Hyla albosignata and H. albofrenata complexes. Based on similarities of reproductive mode we suggest a monophyletic origin for Aplastodiscus and these complexes of Hyla.

Perfil espacial e temporal de poluentes nas águas da represa municipal de São José do Rio Preto, São Paulo, Brasil

In this manuscript, seasonal and spatial trends of water collected from two sampling places in the Preto River in the Turvo-Grande watershed were evaluated. Water samples were collected during June/07 to July/08 and parameters sulphate, total organic carbon, ammonia, conductivity, dissolved oxygen, temperature, dissolved total solids and nitrate were quantified. Seasonal trend indicated sanitary effluents as a point source of contamination in both sampling points. Vertical trends demonstrated that the Municipal Dam was not stratified and received a diffuse source of pollutants from flooding and agriculture runoffs. It was also verified that there is relatively fast ammonia consumption kinetics having a half-life time of 1.43 h which can explain the low ammonia concentrations found in these aquatic bodies.