The use of biodiversity as source of new chemical entities against defined molecular targets for treatment of malaria, tuberculosis, and T-cell mediated diseases: a review

The modern approach to the development of new chemical entities against complex diseases, especially the neglected endemic diseases such as tuberculosis and malaria, is based on the use of defined molecular targets. Among the advantages, this approach allows (i) the search and identification of lead compounds with defined molecular mechanisms against a defined target (e.g. enzymes from defined pathways), (ii) the analysis of a great number of compounds with a favorable cost/benefit ratio, (iii) the development even in the initial stages of compounds with selective toxicity (the fundamental principle of chemotherapy), (iv) the evaluation of plant extracts as well as of pure substances. The current use of such technology, unfortunately, is concentrated in developed countries, especially in the big pharma. This fact contributes in a significant way to hamper the development of innovative new compounds to treat neglected diseases. The large biodiversity within the territory of Brazil puts the country in a strategic position to develop the rational and sustained exploration of new metabolites of therapeutic value. The extension of the country covers a wide range of climates, soil types, and altitudes, providing a unique set of selective pressures for the adaptation of plant life in these scenarios. Chemical diversity is also driven by these forces, in an attempt to best fit the plant communities to the particular abiotic stresses, fauna, and microbes that co-exist with them. Certain areas of vegetation (Amazonian Forest, Atlantic Forest, Araucaria Forest, Cerrado-Brazilian Savanna, and Caatinga) are rich in species and types of environments to be used to search for natural compounds active against tuberculosis, malaria, and chronic-degenerative diseases. The present review describes some strategies to search for natural compounds, whose choice can be based on ethnobotanical and chemotaxonomical studies, and screen for their ability to bind to immobilized drug targets and to inhibit their activities. Molecular cloning, gene knockout, protein expression and purification, N-terminal sequencing, and mass spectrometry are the methods of choice to provide homogeneous drug targets for immobilization by optimized chemical reactions. Plant extract preparations, fractionation of promising plant extracts, propagation protocols and definition of in planta studies to maximize product yield of plant species producing active compounds have to be performed to provide a continuing supply of bioactive materials. Chemical characterization of natural compounds, determination of mode of action by kinetics and other spectroscopic methods (MS, X-ray, NMR), as well as in vitro and in vivo biological assays, chemical derivatization, and structure-activity relationships have to be carried out to provide a thorough knowledge on which to base the search for natural compounds or their derivatives with biological activity.

Análise florística e estrutural do componente arbustivo-arbóreo de uma floresta de galeria no Município de Cristais Paulista, SP, Brasil

Remanescentes florestais na porção nordeste do Estado de São Paulo são ainda pouco estudados quanto à composição florística. Foi realizado o levantamento florístico e fitossociológico de uma floresta de galeria no Município de Cristais Paulista visando à caracterização da flora do remanescente e o estudo das relações florísticas com outras formações ribeirinhas. Para o levantamento fitossociológico foi utilizado o método de ponto-quadrante. em quatro transeções paralelas ao curso d'água, foram estabelecidos 90 pontos eqüidistantes em 10 metros e amostrados os indivíduos com PAP > 15 cm. Espécies em estágio reprodutivo, não amostradas no levantamento fitossociológico, foram coletadas e identificadas. Foram encontradas 68 espécies, distribuídas em 37 famílias, das quais 53 espécies e 34 famílias foram amostradas no levantamento fitossociológico. O índice de diversidade (H') para as espécies foi de 3,17 nats indivíduo-1 e as espécies mais importantes (em VI) foram Virola sebifera, Protium heptaphyllum, Tapirira guianensis e Copaifera langsdorffii. A comparação com outras florestas ribeirinhas evidenciou uma maior semelhança florística com as florestas situadas principalmente na bacia do Rio Grande, possivelmente devido às condições semelhantes de clima, e no Brasil Central, devido à rede de drenagem que atua como rota migratória das espécies. Foram encontradas também muitas espécies compartilhadas com os cerrados, evidenciando a contribuição da flora desse domínio para a floresta de galeria estudada.

Sentinels in Saltator atricollis (Passeriformes: Emberizidae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Macroalgas lóticas do Parque Nacional Chapada dos Veadeiros e arredores (GO): levantamento florístico e distribuição ecológica das comunidades

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Reproductive Dynamics of the Neotropical Treefrog Hypsiboas albopunctatus (Anura, Hylidae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Comparative gas exchange performance during the wet season of three Brazilian Styrax species under habitat conditions of cerrado vegetation types differing in soil water availability and crown density

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Morphological patterns of extrafloral nectaries in woody plant species of the Brazilian cerrado

Extrafloral nectaries are nectar-secreting structures that are especially common among the woody flora of the Brazilian cerrado, a savanna-like vegetation. In this study, we provide morphological and anatomical descriptions of extrafloral nectaries (EFNs) occurring on vegetative and reproductive organs of several plant species from the cerrado, and discuss their function and ecological relevance. We describe the morphology and anatomy of EFNs of 40 species belonging to 15 woody families using scanning electron microscopy and light microscopy. We categorise EFNs following a structural-topographical classification, and characterise the vascularised and complex nectaries, amorphous nectaries and secretory trichomes. Fabaceae, Bignoniaceae, Malpighiaceae and Vochysiaceae were the plant families with the majority of species having EFNs. Ten species possess more than one morphotype of gland structure. Observations and experimental field studies in the cerrado support the anti-herbivore role of EFN-gathering ants in this habitat. Additional morphological studies of EFNs-bearing plants, including other growth forms (e.g. herbs and lianas), are being undertaken and will hopefully cast further light on the ecological relevance of these glands in the cerrado, especially with respect to their attractiveness to multiple visitors.

A simple graphical model of small mammal succession after fire in the Brazilian cerrado

We studied the succession of small mammal species after fire in the cerrado (Neotropical savanna) of Central Brazil. Populations of small mammals were sampled with live-trapping techniques in a series of nine sites of different successional age, ranging from 1 to 26 years after fire. Ten species of small mammals were captured through all the seral stages of succession. Species richness ranged from two to seven species by seral stage. The species were arranged in different groups with respect to abundance along the succession: the first was composed of early successional species that peaked <2 years after fire (Calomys callosus, C. tener, Thalpomys cerradensis, Mus musculus, Thylamys velutinus); the second occurred or peaked 2-3 years after fire (Necromys lasiurus, Gracilinanus sp., Oryzomys scoth). Gracilinanus agilis peaked in the last seral stage. Species richness of small mammals showed an abrupt decrease from an average of four species immediately after fire to two species 5-26 years after the last fire. We propose a simple graphical model to explain the pattern of species richness of small mammals after fire in the cerrado. This model assumes that the occurrence of species of small mammals is determined by habitat selection behavior by each species along a habitat gradient. The habitat gradient is defined as the ratio of cover of herbaceous to woody vegetation. The replacement of species results from a trade-off in habitat requirements for the two habitat variables.

Leaf heliotropism in Styrax camporum Pohl from the Brazilian cerrado: distinct gas exchange and leaf structure, but similar leaf temperature and water relations

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Germination performance of congeneric Styrax species from the Cerrado sensu lato areas and their distribution pattern in different physiognomies

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Root, shoot and leaf traits of the congeneric Styrax species may explain their distribution patterns in the cerrado sensu lato areas in Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Diversidade de vespas sociais (Hymenoptera: Vespidae) em áreas de cerrado na Bahia

A diversidade de espécies de vespas sociais associadas à vegetação de cerrado no Oeste da Bahia foi analisada neste estudo. Dentre as dezenove espécies de vespas sociais encontradas, Chartergus globiventris de Saussure, Chartergellus communis Richards e Metapolybia cingulata (Fabricius) são registradas pela primeira vez para o estado. O cerrado arbóreo, apesar de apresentar maior riqueza (S = 19) e maior diversidade de espécies (H' = 2,33), apresentou níveis de abundância (N = 87 ninhos) inferiores aos sistemas agrícolas (N = 107 ninhos; S = 8 espécies; H' = 1,84). A fisionomia de cerrado campo sujo apresentou a menor abundância de colônias de vespas sociais (N = 61) e valores intermediários de riqueza (S = 13) e diversidade (H' = 2,20).

A comparative floristic analysis of a cerrado area in Botucatu, State of São Paulo (Brazil)

Based on the results of a phytosociological survey in a ''cerrado'' area located within the municipality of Botucatu, state of São Paulo Brazil, a comparative analysis of the 58 sampled tree species' is here presented using the data of other available floristics works for the ''cerrados in the same state. With a binary matrix of presence/absence of shared common species with the studied plot, a clustering analysis was performed thus obtaining a dendrogram which groups northern and southern areas with the same vegetation in the state of São Paulo previously treated as floristicaly differentiated. These results are discussed under the assumption that Isolated areas of ''cerrados'' are to be taken as targets for immediate conservation.

Plantas do cerrado brasileiro com atividade contra Mycobacterium fortuitum

Mycobacterium fortuitum is a rapidly-growing species of bacteria, ubiquitous in the environment and related to important human mycobacterioses. It has been isolated from blood, abscesses, the endocardium and surgical and traumatic wounds. This mycobacterium is hard to treat, being recognized in the literature as resistant even to the drugs used in the treatment of tuberculosis. The objective of this study was to screen extracts prepared from plants of the Brazilian cerrado (extended savanna-like belt) with known activity against M. fortuitum, employing the Microplate Alamar Blue Assay (MABA) as the analytical method. Out of 26 extracts tested against M. fortuitum, the nonpolar extract of Quassia amara (in methylene dichloride) gave the best result (MIC 62.5μg/ mL), followed by the nonpolar extracts of Syngonanthus macrolepsis, Davilla elliptica and Turnera ulmifolia, with equal MICs of 125μg/ml. The polar extracts (in ethanol and methanol) obtained from the same plants were considered inactive, since the MIC values determined were above 500μg/mL and not significantly different from those of extracts from other plants, without known activity.

Instantaneously measured traits may detect non-plastic ecophysiological performances in response to drought, explaining distributions of Styrax species in the Cerrado

We analyzed the differences between irrigated and non-irrigated plants of three congeneric Styrax species that present distinct distribution patterns in the physiognomies of the Cerrado vegetation in Brazil. Styrax ferrugineus showed a stomatal conductance (gs) unresponsive to soil water deficit in potted plants. This may explain the high gas exchange and photochemical efficiency found in this species, which is well adapted to the Cerrado sensu stricto (s. str.), a savanna-type vegetation. S. camporum, which is widely distributed in the Cerrado sensu lato (s. l.) areas, was the only species that exhibited increased intrinsic water use efficiency on the days of maximum water deficit. This result distinguishes S. camporum from S. pohlii, which is a forest species, since the gs of both species decreased during the days of maximum water stress. In contrast to other studies, we propose that instantaneously measured traits, such as leaf gas exchange rates and chlorophyll fluorescence, may be used to detect non-plastic performances in response to environmental stress, helping explain distinct geographical distributions of congeneric species in the Cerrado vegetation. © 2013 Springer-Verlag Berlin Heidelberg.