Global analysis of the sugarcane microtranscriptome reveals a unique composition of small RNAs associated with axillary bud outgrowth

Axillary bud outgrowth determines shoot architecture and is under the control of endogenous hormones and a fine-tuned gene-expression network, which probably includes small RNAs (sRNAs). Although it is well known that sRNAs act broadly in plant development, our understanding about their roles in vegetative bud outgrowth remains limited. Moreover, the expression profiles of microRNAs (miRNAs) and their targets within axillary buds are largely unknown. Here, we employed sRNA next-generation sequencing as well as computational and gene-expression analysis to identify and quantify sRNAs and their targets in vegetative axillary buds of the biofuel crop sugarcane (Saccharum spp.). Computational analysis allowed the identification of 26 conserved miRNA families and two putative novel miRNAs, as well as a number of trans-acting small interfering RNAs. sRNAs associated with transposable elements and protein-encoding genes were similarly represented in both inactive and developing bud libraries. Conversely, sequencing and quantitative reverse transcription-PCR results revealed that specific miRNAs were differentially expressed in developing buds, and some correlated negatively with the expression of their targets at specific stages of axillary bud development. For instance, the expression patterns of miR159 and its target GAMYB suggested that they may play roles in regulating abscisic acid-signalling pathways during sugarcane bud outgrowth. Our work reveals, for the first time, differences in the composition and expression profiles of diverse sRNAs and targets between inactive and developing vegetative buds that, together with the endogenous balance of specific hormones, may be important in regulating axillary bud outgrowth. © 2013 © The Author(2) [2013].

Characterization and impact of the sugarcane borer on sugarcane yield and quality

The sugarcane borer, Diatraea saccharalis (F.) (Lepidoptera: Crambidae), is a key pest of sugarcane (Saccharum spp.). While damage caused by this pest has increased in the past 20 yr, studies investigating the insect-plant interactions are still lacking. Moreover, there is no information about the consequences of borer damage on the parameters of sugar quality. Therefore, two field experiments were performed during the 2010 and 2011 growing seasons in Brazil to compare the raw material and sugar quality of SP80-3280 sugarcane plants with and without the sugarcane borer. Plants were protected within screen cages and infested weekly during the 2010 and 2011 seasons, using egg masses starting at the second and third internode stage. At harvest, 25.77 and 19.01% of the internodes were bored by larvae (infestation intensity, II) in the first and second seasons, respectively. There was no correlation between the borer gallery total volume and II. The fiber content significantly increased with increasing II. The stalk biometric parameters, such as length, diameter, and yield, were not correlated with II. The sucrose yield significantly decreased with increasing II. Consequently, sugar yield losses were estimated at 8.83 and 19.80% per 1% bored internode for the first and second seasons, respectively. The concentration of phenolic compounds increased, and unclarified juice color quality decreased, with increasing II. Significant differences were detected in the quality of the sugar. These results should be confirmed for other sugarcane cultivars and incorporated into an economic injury level to enhance decision-making strategies for borer management. © 2013 by the American Society of Agronomy, 5585 Guilford Road, Madison, WI 53711. All rights reserved.

Acúmulo de nutrientes no colmo de cana-de-açúcar em função de fontes e doses de manganês

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Impacts of agricultural activities in remaining forest: Campinas/SP, Brazil

Forest fragmentation occurs normally in an area around the city or with high agricultural influence, such as the Forest of Quilombo that lies in Metropolitan Campinas/SP- Brazil. This forest is one such example since it is separated from the other forest fragments in the region for several types of human action. The objective of this study is to analyze the macro and micronutrients and soil edaphic insect fauna in the forest, pasture and sugar cane and inferring the impacts caused by the Mata do Quilombo cattle farming and urban expansion in chemical aspects of soil. Samples were collected in June/11, according to the procedure of method traps pitfall traps. In addition, at each sampling point four composite samples were collected for soil fertility analysis. Samples were collected at six points: pasture, degraded forest (near pasture), preserved forest (near pasture), degraded forest (near cane sugar), preserved forest (near cane sugar), and sugar cane sugar. The samples thus prepared were analyzed Ca, P, K, Mg, pH, organic matter, H + Al, Sum of Base (SB), Base Percentage Saturation (V%), Cation Exchange Capacity (CEC) and trace elements (S, B, Cu, Fe, Mg and Zn). Generally it can be seen that the group of organisms of soil fauna presented with little biodiversity. The number of individuals also shows little species, taxonomic groups showing the highest degree of impact that the remaining forest has suffered. Regarding the analysis of fertility it can be observed that the soil of the surrounding areas of the forest is under direct influence of agriculture. © 2013 WIT Press.

Qualidade tecnológica e produtividade agroindustrial de cana-deaçúcar submetida a adubação com zinco

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Efeito residual de fontes de fósforo nos atributos químicos do solo, nutrição e produtividade de biomassa da cana-de-açúcar

In tropical regions, the residual effect of phosphate fertilizer source is of crucial importance. This study aimed to evaluate the effects of application of P sources in chemical properties of soil, nutrition and productivity of sugarcane plant and during the first and second ratoon. The sources of P applied in furrows at planting were, triple superphosphate, Arad phosphate, bone meal (100 kg ha-1 P2O5 total) and a control without P, the varieties of sugarcane studied were IAC86-2480 and SP79-1011. A randomized block design in a 4 × 2 factorial was used, with four replications. The study was conducted in the municipality of Alta Floresta-MT, Brazil, in Typic Hapludox. After each cutting, in soil P content, pH and Ca were evaluated. In the plant, the production of green and dry matter of shoots, the concentration of P in the biomass harvested, the export of P and agronomic efficiency of the sources of P were determined. The bone meal had a higher agronomic efficiency resulted in greater accumulation and export of P by crop, higher content of available Ca and P and increase soil pH. The Arad reactive phosphate increased its agronomic efficiency between crop cycles.

Quality of performance of the operation of sugarcane mechanized planting in day and night shifts

The sugarcane mechanized planting is becoming increasingly widespread in Brazil due to a higher operability and better working conditions offered to workers compared to other types of planting. Studies related to this topic are insufficient or scarce in Brazil. In this context, the aim of this study was to evaluate the operation quality of sugarcane mechanized planting in two operation shifts, by means of statistical process control. The mechanized planting was held on March 2012 and statistical design was completely randomized with two treatments, totaling 40 replications for the day shift and 40 replications for the night shift. The variables evaluated were: speed, engine rotation, engine oil pressure, water temperature of the engine, effective field capacity and the time consumption hourly and effective fuel. The use of statistical control charts showed that random intrinsic do not cause this process. The tractor alignment error showed outliers in the day and night shifts operations, indicating a possible delay in receiving the signal. The water temperature of the engine and the effective fuel consumption showed lower variability in nighttime operation with average values of 81°C and 22.66 L ha-1, respectively. The hourly fuel consumption had greater variability and consequently lower quality during the night of the operation, with an average consumption of 25.46 L h-1 while the day shift showed 26.86 L h-1.

Soil and crop residue CO2-C emission under tillage systems in sugarcane-producing areas of southern Brazil

Appropriate management of agricultural crop residues could result in increases on soil organic carbon (SOC) and help to mitigate gas effect. To distinguish the contributions of SOC and sugarcane (Saccharum spp.) residues to the short-term CO2-C loss, we studied the infl uence of several tillage systems: heavy offset disk harrow (HO), chisel plow (CP), rotary tiller (RT), and sugarcane mill tiller (SM) in 2008, and CP, RT, SM, moldboard (MP), and subsoiler (SUB) in 2009, with and without sugarcane residues relative to no-till (NT) in the sugarcane producing region of Brazil. Soil CO2-C emissions were measured daily for two weeks after tillage using portable soil respiration systems. Daily CO2-C emissions declined after tillage regardless of tillage system. In 2008, total CO2-C from SOC and/or residue decomposition was greater for RT and lowest for CP. In 2009, emission was greatest for MP and CP with residues, and smallest for NT. SOC and residue contributed 47% and 41%, respectively, to total CO2-C emissions. Regarding the estimated emissions from sugarcane residue and SOC decomposition within the measurement period, CO2-C factor was similar to sugarcane residue and soil organic carbon decomposition, depending on the tillage system applied. Our approach may define new emission factors that are associated to tillage operations on bare or sugarcane-residue-covered soils to estimate the total carbon loss.

Respostas fisiológicas de cultivares de cana-de-açúcar a herbicidas seletivos

The use of selective herbicides to control weeds has caused different responses in cultivars of sugar cane, and some products affect physiological characteristics and reduce the photosynthetic activity. This study aimed to evaluate the physiological traits in cultivars of sugar cane under the effect of applying post-emergence herbicides. The test was developed in Jau, SP. The experimental design was randomized blocks in factorial scheme 5 x 4 (cultivar x herbicide) with four replications. SP81-3250, RB855156, RB855453, RB867515, IACSP95-5000 were grown in this studied. Herbicides clomazone (1200 g i.a.ha-1); commercial mixture of clomazone + ametryn (1000 + 1500 g i.a.ha-1) and ametryn (3000 g i.a.ha-1) and a control were applied at 30 days after planting. Cultivars IACSP95-5000 and RB867515 were less affected physiologically and can be considered selective to these herbicides. The application of clomazone and ametryn affected negatively the traits maximum photochemical efficiency of photosystem II (Fv/Fm), SPAD index and photosynthetic pigments, but the mixture of these herbicides caused higher reductions, indicating to be the more aggressive to the cultivars.

Tolerância à deficiência hídrica em cultivares de cana-de-açúcar avaliada por meio de variáveis morfofisiológicas

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Técnicas para acúmulo em plantas de substâncias fotossintetizantes de uso em terapia fotodinâmica

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Cinética de absorção de silício por cultivares de cana-de-açúcar e de arroz

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Atributos químicos do solo, densidade de raiz e produtividade da cana-de-açúcar em função da aplicação de gesso agrícola

Pós-graduação em Agronomia (Ciência do Solo) - FCAV

Escória de siderurgia na cultura da cana-planta: efeitos no solo, na nutrição e na produtividade

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Relação C/N e proporção de fontes nitrogenadas na produtividade de Agaricus blazei Murrill e poder calorífico do composto

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)