Dynamics characterization of modified Gross-Pitaevskii equation

The dynamics of dissipative and coherent N-body systems, such as a Bose-Einstein condensate, which can be described by an extended Gross-Pitaevskii formalism, is investigated. In order to analyze chaotic and unstable regimes, two approaches are considered: a metric one, based on calculations of Lyapunov exponents, and an algorithmic one, based on the Lempel-Ziv criterion. The consistency of both approaches is established, with the Lempel-Ziv algorithmic found as an efficient complementary approach to the metric one for the fast characterization of dynamical behaviors obtained from finite sequences. © 2013 Elsevier B.V. All rights reserved.

Performance analysis of smart grid communication protocol DNP3 over TCP/IP in a heterogeneous traffic environment

This paper presents simulation results of the DNP3 communication protocol over a TCP/IP network, for Smart Grid applications. The simulation was performed using the NS-2 network simulator. This study aimed to use the simulation to verify the performance of the DNP3 protocol in a heterogeneous LAN. Analyzing the results it was possible to verify that the DNP3 over a heterogeneous traffic network, with communication channel capacity between 60 and 85 percent, it works well with low packet loss and low delay, however, with traffic values upper 85 percent, the DNP3 usage becomes unfeasible because the information lost, re-transmissions and latency are significantly increased. © 2013 IEEE.

Assembling a xylanase-lichenase chimera through all-atom molecular dynamics simulations

Multifunctional enzyme engineering can improve enzyme cocktails for emerging biofuel technology. Molecular dynamics through structure-based models (SB) is an effective tool for assessing the tridimensional arrangement of chimeric enzymes as well as for inferring the functional practicability before experimental validation. This study describes the computational design of a bifunctional xylanase-lichenase chimera (XylLich) using the xynA and bglS genes from Bacillus subtilis. In silico analysis of the average solvent accessible surface area (SAS) and the root mean square fluctuation (RMSF) predicted a fully functional chimera, with minor fluctuations and variations along the polypeptide chains. Afterwards, the chimeric enzyme was built by fusing the xynA and bglS genes. XylLich was evaluated through small-angle X-ray scattering (SAXS) experiments, resulting in scattering curves with a very accurate fit to the theoretical protein model. The chimera preserved the biochemical characteristics of the parental enzymes, with the exception of a slight variation in the temperature of operation and the catalytic efficiency (k cat/Km). The absence of substantial shifts in the catalytic mode of operation was also verified. Furthermore, the production of chimeric enzymes could be more profitable than producing a single enzyme separately, based on comparing the recombinant protein production yield and the hydrolytic activity achieved for XylLich with that of the parental enzymes. © 2013 Elsevier B.V. All rights reserved.

Docking e análise do modo de ligação de três moléculas pequenas, um benzimidazol e dois compostos de crômio, nos sulcos do DNA 5'-CGCGAATTCGCG-3

Pós-graduação em Ciência e Tecnologia de Materiais - FC

Simulação numérica de escoamentos incompressíveis pelo método de elementos finitos com esquema de Separação Baseado na Característica (CBS)

Pós-graduação em Engenharia Mecânica - FEIS

Avaliação energética da secagem combinada de milho na região de Pedrinhas Paulista, SP

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Conforto térmico em habitações de interesse social: um estudo de caso

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Ecologia populacional de Lucilia cuprina (Wiedemann, 1830) (Diptera, Calliphoridae): aspecto do desenvolvimento em diferentes densidades larvais e seus efeitos sobre os adultos resultantes

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Simulação computacional do enovelamento de proteínas utilizando o Modelo HP

Pós-graduação em Ciência e Tecnologia de Materiais - FC

Efeito de vacâncias de nitrogênio, gálio e outros parâmetros da célula unitária nas propriedades eletrônicas do GaN

Pós-graduação em Ciência e Tecnologia de Materiais - FC

Estudo do coeficiente de difusão no enovelamento de proteína

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Influência da desidratação no comportamento mecânico do disco intervertebral lombar

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Uso da oxi-combustão em equipamentos convencionais como alternativa a queima com ar

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Aplicações da teoria de nós no estudo da estrutura de proteínas

Pós-graduação em Ciência e Tecnologia de Materiais - FC

Simulação computacional e síntese de polímero molecularmente impresso para extração em fase sólida (MISPE) de ciprofloxacina em urina

Pós-graduação em Química - IQ