Metagenômica comparativa de solo de regiões de mata atlântica e caatinga do estado do Rio Grande do Norte - Brasil

The microorganisms play very important roles in maintaining ecosystems, which explains the enormous interest in understanding the relationship between these organisms as well as between them and the environment. It is estimated that the total number of prokaryotic cells on Earth is between 4 and 6 x 1030, constituting an enormous biological and genetic pool to be explored. Although currently only 1% of all this wealth can be cultivated by standard laboratory techniques, metagenomic tools allow access to the genomic potential of environmental samples in a independent culture manner, and in combination with third generation sequencing technologies, the samples coverage become even greater. Soils, in particular, are the major reservoirs of this diversity, and many important environments around us, as the Brazilian biomes Caatinga and Atlantic Forest, are poorly studied. Thus, the genetic material from environmental soil samples of Caatinga and Atlantic Forest biomes were extracted by direct techniques, pyrosequenced, and the sequences generated were analyzed by bioinformatics programs (MEGAN MG-RAST and WEBCarma). Taxonomic comparative profiles of the samples showed that the phyla Proteobacteria, Actinobacteria, Acidobacteria and Planctomycetes were the most representative. In addition, fungi of the phylum Ascomycota were identified predominantly in the soil sample from the Atlantic Forest. Metabolic profiles showed that despite the existence of environmental differences, sequences from both samples were similarly placed in the various functional subsystems, indicating no specific habitat functions. This work, a pioneer in taxonomic and metabolic comparative analysis of soil samples from Brazilian biomes, contributes to the knowledge of these complex environmental systems, so far little explored

Metagenômica comparativa de solo de regiões de mata atlântica e caatinga do estado do Rio Grande do Norte - Brasil

The microorganisms play very important roles in maintaining ecosystems, which explains the enormous interest in understanding the relationship between these organisms as well as between them and the environment. It is estimated that the total number of prokaryotic cells on Earth is between 4 and 6 x 1030, constituting an enormous biological and genetic pool to be explored. Although currently only 1% of all this wealth can be cultivated by standard laboratory techniques, metagenomic tools allow access to the genomic potential of environmental samples in a independent culture manner, and in combination with third generation sequencing technologies, the samples coverage become even greater. Soils, in particular, are the major reservoirs of this diversity, and many important environments around us, as the Brazilian biomes Caatinga and Atlantic Forest, are poorly studied. Thus, the genetic material from environmental soil samples of Caatinga and Atlantic Forest biomes were extracted by direct techniques, pyrosequenced, and the sequences generated were analyzed by bioinformatics programs (MEGAN MG-RAST and WEBCarma). Taxonomic comparative profiles of the samples showed that the phyla Proteobacteria, Actinobacteria, Acidobacteria and Planctomycetes were the most representative. In addition, fungi of the phylum Ascomycota were identified predominantly in the soil sample from the Atlantic Forest. Metabolic profiles showed that despite the existence of environmental differences, sequences from both samples were similarly placed in the various functional subsystems, indicating no specific habitat functions. This work, a pioneer in taxonomic and metabolic comparative analysis of soil samples from Brazilian biomes, contributes to the knowledge of these complex environmental systems, so far little explored

Uso da biodiversidade por populações humanas na caatinga e na Mata Atlântica, Rio Grande do Norte, Nordeste do Brasil

The use of animals is a common activity but it can be really variable between human populations. This work analyzed the knowledge about useful animal species between human communities in Caatinga and Atlantic Forest considering the influence of socioeconomics and environmental factors on the species selection. Forty people were interviewed in Caraúbas community (Atlantic Forest) and thirty were interviewed in Barrocas community (Caatinga). A total of 193 animals were cited. The communities showed a low degree of similarity (20%) and the general diversity of mentioned species was significantly bigger in Caraúbas. Men cited a diversity of species greater than women for food category in Caraúbas and pet category in Caraúbas and Barrocas. Women cited greater species diversity for medicinal use in Caraúbas. In general, in both communities, the age group >60 years showed a greater knowledge than the others. The multiple regression analysis showed the age as the only socioeconomic factor which influenced significantly the knowledge about animals for the food category in both communities. Considering the richness of known species, there were differences only between gender for sum of uses and food category in Caraúbas and for the pet category in Barrocas with men showing a greater knowledge than women. The results showed that local environmental differences are fundamental at the species selection but they also showed that within communities there are other factors like gender and age that tend to influence the knowledge about species. It is important to consider cultural, economic, social and environmental factors to understand better the interactions between people and animals so that this information can be used to facilitate the implementation of conservation measures

Descrição de novas espécies de Entomobryoidea, Womersley, 1934 (Collembola, Hexapoda) em remanescentes urbanos de mata atlântica no Estado do Rio Grande do Norte

Springtails are commonly recognized microarthropods edaphic environments. Among the most common (and most visible) forms of these animals are the Entomobryoidea, one of the most diverse groups of springtails. Although more than 8,300 species of Collembola are registered on the globe, in Brazil a little over 310 species are recorded, mostly in the Southeast. In the Northeast, particularly in Rio Grande do Norte, these records are still reduced, even in the Atlantic Forest domain for this admittedly diverse fauna and specifically, for Entomobryoidea. This study aimed to describe new species of Entomobryoidea in urban remnants of Atlantic Forest in Rio Grande do Norte, specifically in Parque das Dunas, Natal in the Environmental Protection Area Genipabu, Extremoz. The collections were made in the months July and August 2012 and January and February 2013, using entomological vacuums and plastic trays. The specimens were identified in the laboratory and described in detail by looking at the literature. In this paper four new species were described Entomobryidae family: Entomobrya sp. nov. 1, Seira sp. nov. 1, Seira sp. nov. 2 and Trogolaphysa sp. nov. 1. Seira sp. nov. 1 has clear similarities to S. paraibensis, however the chaetotaxy of the mesothorax and abdomen IV distinguishes both species. The number of phylogenetic proximity suggests similarities between species. Seira sp. nov. 2 is characterized by its chaetotaxy, mainly in the 'M' head and his mesothorax. There is possibility of a phylogenetic relationship with S. praiana and S. Potiguara due to some similarities. Entomobrya sp. nov. 1 has little resemblance to Brazilian species, from the point of view of color, however there is for the latter detailing the dorsal chaetotaxy, which might obscure evolutionary relationships of proximity. Even so, the main diagnostic feature Entomobrya sp. nov. 1 compared to other species of the genus is the complexity of the chaetotaxy of the fifth abdominal segment. Descriptions of new species of Collembola, potentially endemic to their habitats of occurrence may help to understand the morphological and evolutionary patterns in the sampled taxa, as well as the preservation of the environments in which they were found.

Análise dos remanescentes de mata atlântica do Estado do Rio Grande do Norte : uma perspectiva em alta resolução

The habitat loss and fragmentation are considered the main threats to the biodiversity. These threats operate at the landscape level, which drives the need to manage entire landscapes, not just its components. Although systematic monitoring of the Atlantic Forest biome has been ongoing since the late eighties, current data on forest fragmentation for the sub-region of Pernambuco are practically nonexistent. This study aimed to map out, with high spatial resolution, the remnants of Atlantic forest in Rio Grande do Norte, and conduct a landscape level analysis. The results show that the landscape is highly fragmented, where about 13.6% to 17% of biome remains. Most of the fragments is less than 10 ha, while a few fragments have area larger than 100 ha. Although the high degree of fragmentation, the average distance between fragments found was small (128 m), this estimate is lower than has been observed for the biome (1440m). There is evidence that abrupt changes in the quantification of landscape structure can occur when one observes the fragmentation at high spatial resolution. The results presented here can be used in management actions, in order to make the scenario more conducive to maintaining biodiversity.

Estrutura da Comunidade de Lagartos de um remanescente de mata atlântica do Estado do Rio Grande Do Norte, Brasil.

As part of a broader project, Diversity and Distribution Patterns of Floristic and Faunistic composition of remnants of Potiguar s Atlantic Forest, as subsidies to conservation , that subsidizes a group of institutional research, This study aimed to evaluate the structure of the assemblage of lizards a remnant of the of the northern Atlantic Forest, identifying ecological factor (s) that contribute to the coexistence of sympatric species. Additionally, we studied the thermal ecology and thermoregulatory behavior of umbrophily and heliophily species live the Parque Estadual Mata da Pipa (PEMP), a remnant of Atlantic forest located in the Tibau do Sul municipality of, Rio Grande do Norte State, Brazil. It is one of the largest remnants of the Atlantic Forest and has an area of approximately 290 ha. The study was performed by four excursions to the field for 20 days each, when active search and pitfalls traps were used to record and colleted specimens in different habitats of the area. We recorded the presence of 19 species of lizards, of which seven are typical of forest areas, three are endemic Atlantic Forest, these two northern and one are new record for the Rio Grande do Norte. The use of resources, the results showed that phylogenetically related species do not always use a similar way the resources available; the feeding niche was the segregated component of the species that overlapped extensively in the use of space and vice versa. To examine the thermal ecology and thermoregulatory behavior of Kentropyx calcarata and Coleodactylus natalensis, we recorded the clocal temperature (Tc), oh the substrate (Ts) and of the air (Ta) to investigate what of these are the source of heat more important to the temperature s body of these lizards. Behavioral observations were conducted to analyze strategies to optimize the acquisition of heat. The air temperature explained most strongly to variation in body temperature of K. calcarata, while the temperature of the substrate to C. natalensis. As for the behavioral observations, they confirmed that K. calcarata is an active thermoregulatory; C. natalensis is a passive thermoregulatory.

Entomobryoidea e Symphypleona (Collembola, Hexapoda) em remanescentes de Mata Atlântica do Estado Do Rio Grande do Norte

Colêmbolos são pequenos artrópodes extremamente abundantes na natureza. São semelhantes a insetos em seu padrão de tagmose, ecologicamente muito importantes e podem ser usados como bioindicadores. Mais de 8.300 espécies já foram descritas no mundo, mas se estima que a riqueza real corresponda a um número muito maior. A Mata Atlântica corresponde ao domínio fitogeográfico mais alterado pela ação antrópica no Brasil, restando menos de 8,5% de sua cobertura original. No Rio Grande do Norte a Mata Atlântica cobre apenas 0,27% do território do Estado. Assim, considerando a importância de se conhecer a fauna de Collembola, sobretudo num ambiente ameaçado como a Mata Atlântica, este trabalho objetivou estudar a riqueza de colêmbolos Entomobryoidea e Symphypleona ocorrentes em dois remanescentes de Mata Atlântica do Rio Grande do Norte através de coletas ativas com aspirador entomológico e passivas com pitfall, durante os períodos de chuva e seca. Foram identificadas 22 espécies de colêmbolos, sendo que destas 19 (mais de 85% do total) são novas para a ciência, incluindo um novo gênero da família Sminthuridae. As coletas realizadas no período chuvoso apresentaram praticamente o dobro de espécies em relação às realizadas no período seco. Este fato possivelmente está associado à dependência dos colêmbolos de umidade, assim como estratégias de resistência a período secos. São descritas quatro novas espécies, incluindo o novo gênero (Trogolaphysa sp.nov., Gen.nov. sp.nov., Szeptyckitheca sp.nov. e Sminthurinus sp.nov.). Este expressivo número de espécies novas identificadas, os novos registros para o gêneros e famílias para a Mata Atlântica do Rio Grande do Norte e a descoberta de um novo gênero corroboram o pressuposto que motivou este trabalho: o Rio Grande do Norte apresenta uma fauna de Collembola desconhecida e potencialmente diversificada. Além disso, foram geradas informações importantes sobre a morfologia das espécies descritas, que por sua vez são de grande importância para a sistemática dos Collembola. O novo gênero descrito faz parte de um visível subgrupo dentro da família Sminthuridae (aqueles com o unguis com cavidade) que aparentemente tem potencial para ser reconhecido futuramente em alguma categoria taxonômica supragenérica.

A paisagem da Mata Atlântica do estado do Rio Grande do Norte: remanescentes, configuração espacial e disponibilidade de habitat

The Atlantic Forest in Rio Grande do Norte (RN) is included in Pernambuco biogeographic sub-region and it is composed by Semi-deciduous Forest, deciduous Forest, Mangrove and Restinga. We assessed the conservation status of Atlantic Forest in the RN through remnants mapping using high resolution satellite images and landscape ecology approaches. We evaluated if there is difference between the north and south coastal regions considering their natural a historical land use differences. We also assessed the influence of the small remnants on landscape cover and configuration. The proportion of the original biome area with remnants larger than 3 hectares is 15.60% for the official governmental limit and is 16.60% for the alternative limit (SNE, 2002). This remnants proportion varies between 0.56 and 46.52% in the hydrographic basins. 89.70% of the remnants are smaller than 50 hectares. Only 6.00% of the remnants are greater than 100 hectares, and these remnants are responsible by 65% of remaining area. The patches with smaller area influence all calculated metrics. The south coastal hydrographic basins have higher percentage of coverage of remnants, larger patch densities and fragments with larger areas than north coastal hydrographic basins. The diffuse drainage basins of the southern coastal have the highest percentage of coverage with remnants. 18.28% and 10% of the biome area are protected by reserves, according to the official governmental and alternative limits respectively. The reserves are mainly of sustainable use (IUCN V-VI). Therefore, the Atlantic Forest in Rio Grande do Norte is in critical situation, with low proportion of remaining area and high fragmentation level. It’s indispensable to biome conservation keep all the remaining area, especially the large remnants, and restore areas to increase remnants proportion and to increase landscape connectivity

O gênero geastrum pers. (phallomycetidae, basidiomycota) em algumas áreas de Mata Atlântica e Caatinga no Rio Grande do Norte, Brasil

A taxonomic survey of representatives of the genus Geastrum took place during the rainy season from 2006 to 2009 in four districts in the state of Rio Grande do Norte: Parque Estadual Dunas do Natal (Atlantic Forest), Mata do Jiqui EMPARN (Atlantic Forest) and Estação Ecológica do Seridó (Caatinga). Fourteen species were recorded: G. entomophilum, G. fimbriatum, G. hirsutum, G. javanicum, G. lageniforme, G. lloydianum, G. minimum, G. morganii, G. ovalisporum, G. pectinatum, G. saccatum, G. schweinitzii, G. setiferum and G. triplex. Of these species, eleven occurred in the Atlantic Forest and six in the Caatinga. A new species has been recorded to science, G. entomophilum, other as a first record for Brazil, G. morganii, six new records for the Northeast, and ten new records for Rio Grande do Norte. The material was tumbled in the Herbarium UFRN. Additionally, a survey of the species of the genus deposited in the Herbarium UFRN was accomplished, resulting in 244 herbarium specimens belonging to thirty-three species. Of these ones, twenty-three were collected in Brazil and ten are from Czech Republic, Europe, as donation from the VZ Herbarium

O gênero geastrum pers. (phallomycetidae, basidiomycota) em algumas áreas de Mata Atlântica e Caatinga no Rio Grande do Norte, Brasil

A taxonomic survey of representatives of the genus Geastrum took place during the rainy season from 2006 to 2009 in four districts in the state of Rio Grande do Norte: Parque Estadual Dunas do Natal (Atlantic Forest), Mata do Jiqui EMPARN (Atlantic Forest) and Estação Ecológica do Seridó (Caatinga). Fourteen species were recorded: G. entomophilum, G. fimbriatum, G. hirsutum, G. javanicum, G. lageniforme, G. lloydianum, G. minimum, G. morganii, G. ovalisporum, G. pectinatum, G. saccatum, G. schweinitzii, G. setiferum and G. triplex. Of these species, eleven occurred in the Atlantic Forest and six in the Caatinga. A new species has been recorded to science, G. entomophilum, other as a first record for Brazil, G. morganii, six new records for the Northeast, and ten new records for Rio Grande do Norte. The material was tumbled in the Herbarium UFRN. Additionally, a survey of the species of the genus deposited in the Herbarium UFRN was accomplished, resulting in 244 herbarium specimens belonging to thirty-three species. Of these ones, twenty-three were collected in Brazil and ten are from Czech Republic, Europe, as donation from the VZ Herbarium

Fungos ectomicorrízicos em áreas de Mata Atlântica do Nordeste do Brasil

Ectomycorrhizal associations are poorly known from tropical lowlands of South America. Recent field trips to the reserve Parque Estadual das Dunas in Natal, in Rio Grande do Norte state, Brazil, revealed a undocumented community of ectomycorrhizal fungi. This type of Mycorrhizal association is frequently in the north hemisphere in temperate and boreal forests. The aim of this work is to analyze the occurrence of ectotrophic areas in atlantic rainforest. Collections along and around the trails in the reserve revealed six genera of putatively ECM fungi which belong to the basidiomycete, Amanitaceae, Boletaceae, Russulaceae, Entolomataceae, and Sclerodermataceae family which are poorly documented in Brazil. Plants belonging to Myrtaceae, Polygonaceae, Leguminosae/Caesalpinioideae, Erythroxylaceae, Malphigiaceae, Bromeliaceae, Loganiaceae, Sapotaceae e Celastraceae were found living next to the species of fungi analized. Our results suggest that the area studied is an ectotrophic environment which shows high diversity of putatively ECM fungi and some plants probably host ECM. The tropical lands are a potential focus to study reinforced by the new records of Scleroderma in Brazil and Northwest of Brazil

Diversidade de espécies e ecologia da comunidade de lagartos de um fragmento de Mata Atlântica no nordeste do Brasil

Neste estudo foram investigadas a diversidade, a composição, e as diferenças no uso do espaço (hábitat e microhábitat) e do alimento em uma comunidade de lagartos habitantes da serapilheira de um fragmento de Mata Atlântica, do Estado de Alagoas, Brasil. Para a observação e/ou coleta dos espécimes, foram utilizados os métodos de busca ativa e armadilhas de queda (pit-fall traps) sem cerca-guia. Para análises de diversidade e da existência de diferenças de diversidade entre os hábitats e microhábitats, utilizou-se o índice de Shannon. A largura dos nichos espacial (hábitat e microhábitat) e alimentar foi avaliada, utilizando-se o índice de diversidade de Simpson. A similaridade entre as áreas foi averiguada utilizando-se o índice de Jaccard. Para avaliar o grau de sobreposição quanto ao uso do espaço (hábitats e microhábitats) e do alimento pelas espécies, foi utilizada uma versão da equação de MarcArthur & Levis. Foram obtidas vinte e três espécies de lagartos, pertencentes a nove famílias; destas, dezenove foram obtidas no interior da mata e nove na borda. Para o interior da mata as espécies mais abundantes foram Kentropyx calcarata, Dryadosaura nordestina, Enyalius catenatus e Gymnodactylus darwinii. Na borda da mata as espécies mais abundantes foram Tropidurus hispidus, T. semitaeniatus, Ophiodes striatus e Ameiva ameiva. Quanto à utilização dos recursos, os resultados mostraram que espécies filogeneticamente próximas nem sempre utilizam de maneira semelhante os recursos disponíveis. A dieta em geral foi composta por artrópodes. Tropidurus hispidus e T. semitaeniatus se mostraram especialistas no consumo de Himenoptera (Formicidae), que estiverem presentes em 100% dos seus estômagos. Ophiodes striatus teve como principal alimento caramujos (Gastropoda) e aranhas com 60% cada; sendo Gastropoda mais abundante para esta espécie

Estrutura genética populacional de Heliconius erato e Heliconius melpomene (Lepidoptera: Nymphalidae) em fragmentos de Mata Atlântica do Rio Grande do Norte

Extensive studies using molecular markers on butterflies have shown how a highly fragmented landscape may result in the reduction of gene flow among patches of habitat and, consequently, increase genetic differentiation among populations. However, little is known about Heliconius geographical structure and the effects of fragmentation on the connectivity of populations. Furthermore, findings on the effects of the population structure on the dynamics of mimicry evolution in Heliconius butterflies need to be tested in H. erato and H. melpomene specimens found in other locations other than Central and northern South Americas. For the present study, we had two motivations: (1) compare the population structure of H. erato and H. melpomene given the highly fragmented Brazil s Atlantic Forest habitat; and (2) studying population structure of co-mimics could give us insights into the dynamics of mimicry evolution. For this, we analysed the spatial structure and connectivity of eight populations of Heliconius butterflies, in a total of 137 H. erato specimens and 145 H. melpomene specimens, using nine microsatellites loci, 1144 AFLPs markers and 282 mitochondrial DNA sequences. In general, both species exhibited evidence of population subdivision but no isolation by distance indicating some extent of genetic differentiation among populations. Contrary to Kronforst & Gilbert s (2008) Costa Rican Heliconius, H. melpomene exhibited more genetic differentiation than H. erato based on nuclear markers. However, for mitochondrial DNA, H. erato populations showed more genetic differentiation than H. melpomene. Our results corroborate to other studies on Heliconius butterflies concerning the pronounced population subdivision and local genetic drift found in this genus. Nevertheless, the pattern of this differentiation varies significantly from the pattern found in studies conducted in Central America, where H. erato is generally more differentiated and structured than H. melpomene, based on nuclear markers. This different pattern may reflect different evolutionary histories of Heliconius species in Northeastern Brazil s Atlantic Forest

Taxonomia de Papilionoideae (leguminosae) da Mata Atlântica do Rio Grande do Norte, Brasil

Leguminosae is the third largest family of angiosperms with about 19.325 species and 727 genera, and it is pantropically distributed. Papilionoideae is the most diverse of the three legume subfamilies, with around 13.800 species (71%), 478 genera, and 28 tribes. Papilionoid legumes include herbs, shrubs, lianas or trees with pinnate, trifoliolate, unifoliolate or simple leaves, flowers frequently papilionate with descending imbricate petal aestivation, the petals highly differentiated into standard, keel, and wings, androecium usually diplostemous, and seeds without pleurogram, with conspicuous hilum, and the embryo radicle usually curved. The current study aims to carry out a taxonomic account of the Papilionoideae from Atlantic Forest remnants in Rio Grande do Norte, Brazil, across the herbaria data surveys, collections of field samples and morphological analysis of the collected specimens and/or herbaria materials. Identification key, descriptions, diagnostic characters, illustrations, and geographic distribution of the 68 species and 32 genera within the following tribes Phaseoleae (11 genera/24 species), Dalbergieae (9/20), Swartzieae (3/3), Millettieae (2/4), Sophoreae (2/2), Abreae (1/1), Crotalarieae (1/3), Desmodieae (1/7), Indigofereae (1/3), and Sesbanieae (1/1). The most species-rich genera were Desmodium Desv. (7 species), Centrosema (DC.) Benth. (5), Stylosanthes Sw. (5), Aeschynomene L. (4) and Macroptilium (Benth.) Urb. (4). Concerning to the habit, the herbaceous and shrubby has predominated with 60% (41 spp.), following by the vine and lianas with 28% (19 spp.) and the woody with only 12% (8 spp.). Thirty two species and the following genera are newly recorded for the flora of Rio Grande do Norte: Chaetocalyx, Cochliasanthus, Crotalaria, Galactia, Geoffroea, Macroptilium, Rhynchosia, Swartzia, Trischidium, and Vigna

Parâmetros biológicos de Herpsilochmus pectoralis Sclater 1857 (Aves: Thamnophilidae) em fragmentos de mata atlântica do Nordeste do Brasil

The study of birds represents an important tool for the understanding of the processes involved in behavioral and morphological patterns. The species we have studied belongs to Thamnophilidae family, the third largest family restricted to the Neotropic ecozone. They are popularly known as antbirds and comprise 209 species. A large portion of the species has cryptic behavior, making the acoustic communication an important tool for maintaining contact among birds. Herpsilochmus pectoralis Sclater 1857 has evident sexual dimorphism, measured between 10 and 12 cm height and it is found in forest fragments in the Northeast and it is also categorized as vulnerable to extinction process. This study was conducted in three sandbank fragments on the east coast of the state of Rio Grande do Norte, Brazil. With the help of tape recordings between 2006 and 2012 it was possible to describe and characterize the sing of H. pectoralis. The sing from male birds has more and longer length than the female sing (16% of dimorphism). No differences were found in the dominant frequency between the sexes. We describe four types of calls from this species repertoire. Through capturing with ornithological nets between 2009 and 2012 it was possible to describe and compare the morphology of H. pectoralis. The species have shown lower corporal mass in the dry season. The young birds showed morphometric similarities in comparison to adults. The species has no accentuated dimorphism in their morphometric characteristics. The young ones with flying capabilities have morphometric characteristics of adults, even though they do not show a characteristic adult plumage. The moult pattern in the species is a characteristic of tropical birds, but it shows short reproductive period, typical of temperate species. Even being in the tropical region, the species suffers with seasonal rainfall, which influences their reproductive phenology and moult (remex and rectrix) cycle. Thus, this dissertation provides information on the biology of H. pectoralis to support the understanding of the relationship of this species to the environment and also to know the variations of morphology and vocal aspects, in order to understand patterns and general characteristics of Thamnophilidae.