Mixing characterisation for a serpentine microchannel equipped with embedded barriers

This paper describes the design, simulation, fabrication and experimental analysis of a passive micromixer for the mixing of biological solvents. The mixer consists of a T-junction, followed by a serpentine microchannel. the serpentine has three arcs, each equipped with circular barriers that are patterned as two opposing triangles. >The barriers are engineered to induce periodic perturbations in the flow field and enhance the mixing. CFD (Computational Fluid Dynamics) method is applied to optimise the geometric variables of the mixer before fabrication. The mixer is made from PDMS (Polydimethylsiloxane) using photo- and soft-lithography techniques. Experimental measurements are performed using yellow and blue food dyes as the mixing fluids. The mixing is measured by analysing the composition of the flow's colour across the outlet channel. The performance of the mixer is examined in a wide range of flow rates from 0.5 to 10 µl/min. Mixing efficiencies of higher than 99.4% are obtained in the experiments confirming the results of numerical simulations. The proposed mixer can be employed as a part of lab-on-a-chip for biomedical applications.

Periodic variability in cetacean strandings: links to large-scale climate events

Cetacean strandings elicit much community and scientific interest, but few quantitative analyses have successfully identified environmental correlates to these phenomena. Data spanning 1920–2002, involving a total of 639 stranding events and 39 taxa groups from southeast Australia, were found to demonstrate a clear 11–13- year periodicity in the number of events through time. These data positively correlated with the regional persistence of both zonal (westerly) and meridional (southerly) winds, reflecting general long-term and large-scale shifts in sea-level pressure gradients. Periods of persistent zonal and meridional winds result in colder and presumably nutrient-rich waters being driven closer to southern Australia, resulting in increased biological activity in the water column during the spring months. These observations suggest that large-scale climatic events provide a powerful distal influence on the propensity for whales to strand in this region. These patterns provide a powerful quantitative framework for testing hypotheses regarding environmental links to strandings and provide managers with a potential predictive tool to prepare for years of peak stranding activity.

Anisotropic wetting characteristics on submicrometer-scale periodic grooved surface

Submicrometer-scale periodic structures consisting of parallel grooves were prepared on azobenzene-containing multiarm star polymer films by laser interference. The wetting characteristics on the patterned surfaces were studied by contact angle measurements. Macroscopic distortion of water drops was found on such small-scale surface structures, and the contact angles measured from the direction parallel to the grooves were larger than those measured from the perpendicular direction. A thermodynamic model was developed to calculate the change in the surface free energy as a function of the instantaneous contact angle when the three-phase contact line (TPCL) moves along the two orthogonal directions. It was found that the fluctuations, i.e., energy barriers, on the energy versus contact angle curves are crucial to the analysis of wetting anisotropy and contact angle hysteresis. The calculated advancing and receding contact angles from the energy versus contact angle curves were in good agreement with those measured experimentally. Furthermore, with the groove depth increasing, both the degree of wetting anisotropy and the contact angle hysteresis perpendicular to the grooves increased as a result of the increase in the energy barrier. The theoretical critical value of the groove depth, above which the anisotropic wetting appears, was determined to be 16 nm for the grooved surface with a wavelength of 396 nm. On the other hand, the effect of the groove wavelength on the contact angle hysteresis perpendicular to the grooves was also interpreted on the basis of the thermodynamic model. That is, with the wavelength decreasing, the contact angle hysteresis increased due to the increase in the number of energy barriers. These results may provide theoretical evidence for the design and application of anisotropic wetting surface.

Computational investigations on periodic trends in Group 14 chemistry

Describes the use of computer-aided molecular modelling to investigate trends in the chemistry of the Group 14 elements, namely carbon, silicon, germanium, tin and lead. The chemical behaviour of two classes of molecules containing Group 14 elements was related to trends in the fundamental properties of these elements.

Transcriptional profiling of growth perturbations of the human malaria parasite Plasmodium falciparum

Functions have yet to be defined for the majority of genes of Plasmodium falciparum, the agent responsible for the most serious form of human malaria. Here we report changes in P. falciparum gene expression induced by 20 compounds that inhibit growth of the schizont stage of the intraerythrocytic development cycle. In contrast with previous studies, which reported only minimal changes in response to chemically induced perturbations of P. falciparum growth, we find that ~59% of its coding genes display over three-fold changes in expression in response to at least one of the chemicals we tested. We use this compendium for guilt-by-association prediction of protein function using an interaction network constructed from gene co-expression, sequence homology, domain-domain and yeast two-hybrid data. The subcellular localizations of 31 of 42 proteins linked with merozoite invasion is consistent with their role in this process, a key target for malaria control. Our network may facilitate identification of novel antimalarial drugs and vaccines.

Transient responses of a wetting film to mechanical and electrical perturbations

This article reports real-time observations and detailed modeling of the transient response of thin aqueous films bounded by a deformable surface to external mechanical and electrical perturbations. Such films, tens to hundreds of nanometers thick, are confined between a molecularly smooth mica plate and a deformable mercury/electrolyte interface on a protuberant drop at a sealed capillary tube. When the mercury is negatively charged, the water forms a wetting film on mica, stabilized by electrical double layer forces. Mechanical perturbations are produced by driving the mica plate toward or by retracting the mica plate from the mercury surface. Electrical perturbations are applied to change the electrical double layer interaction between the mica and the mercury by imposing a step change of the bias voltage between the mercury and the bulk electrolyte. A theoretical model has been developed that can account for these observations quantitatively. Comparison between experiments and theory indicates that a no-slip hydrodynamic boundary condition holds at the molecularly smooth mica/electrolyte surface and at the deformable mercury/electrolyte interface. An analysis of the transient response based on the model elucidates the complex interplay between disjoining pressure, hydrodynamic forces, and surface deformations. This study also provides insight into the mechanism and process of droplet coalescence and reveals a novel, counterintuitive mechanism that can lead to film instability and collapse when an attempt is made to thicken the film by pulling the bounding mercury and mica phases apart.

Modeling and simulation of a periodic grating coupled configuration for surface plasmon excitation

The deficiencies in the design of surface plasmon resonance (SPR) systems that are reported in numerous published works consistently identify the optics assembly as the main problem in the miniaturization of SPR sensors for integration into biosensor systems. This paper presents a novel design of a grating coupled optical waveguide surface plasmon (SP) excitation mechanism, investigated with the intention of addressing the problems associated with using the traditional prism input-output light coupling approach. Computational multiphysics modeling and simulation of the design is carried out. The results are presented and discussed.

Faster and parameter-free discord search in quasi-periodic time series

Time series discord has proven to be a useful concept for time-series anomaly identification. To search for discords, various algorithms have been developed. Most of these algorithms rely on pre-building an index (such as a trie) for subsequences. Users of these algorithms are typically required to choose optimal values for word-length and/or alphabet-size parameters of the index, which are not intuitive. In this paper, we propose an algorithm to directly search for the top-K discords, without the requirement of building an index or tuning external parameters. The algorithm exploits quasi-periodicity present in many time series. For quasi-periodic time series, the algorithm gains significant speedup by reducing the number of calls to the distance function.

Existence and global asymptotic stability of positive periodic solution of delayed Cohen-Grossberg neural networks

In this paper, a class of periodic Cohen-Grossberg neural networks with discrete and distributed time-varying delays is considered. By an extension of the Lyapunov-Krasovskii functional method, a novel criterion for the existence and uniqueness and global asymptotic stability of positive periodic solution is derived in terms of M-matrix without any restriction on uniform positiveness of the amplification functions. Comparison and illustrative examples are given to illustrate the effectiveness of the obtained results. © 2014 Elsevier Inc. All rights reserved.