How does ecological disturbance influence genetic diversity?

Environmental disturbance underpins the dynamics and diversity of many of the ecosystems of the world, yet its influence on the patterns and distribution of genetic diversity is poorly appreciated. We argue here that disturbance history may be the major driver that shapes patterns of genetic diversity in many natural populations. We outline how disturbance influences genetic diversity through changes in both selective processes and demographically driven, selectively neutral processes. Our review highlights the opportunities and challenges presented by genetic approaches, such as landscape genomics, for better understanding and predicting the demographic and evolutionary responses of natural populations to disturbance. Developing this understanding is now critical because disturbance regimes are changing rapidly in a human-modified world.

Genetic analyses reveal limited dispersal and recovery potential in the large freshwater crayfish Euastacus armatus from the southern Murray-Darling Basin

Understanding dispersal traits and adaptive potential is critically important when assessing the vulnerability of freshwater species in highly modified ecosystems. The present study investigates the population genetic structure of the Murray crayfish Euastacus armatus in the southern Murray–Darling Basin. This species has suffered significant population declines in sections of the Murray River in recent years, prompting the need for information on natural recruitment processes to help guide conservation. We assessed allele frequencies from 10 polymorphic microsatellite loci across 20 sites encompassing the majority of the species’ range. Low levels of gene flow were observed throughout hydrologically connected waterways, but significant spatial autocorrelation and low migration rate estimates reflect local genetic structuring and dispersal limitations, with home ranges limited to distances <50-km. Significant genetic differentiation of headwater populations upstream of barriers imposed by impoundments were also observed; however, population simulations demonstrate that these patterns likely reflect historical limitations to gene flow rather than contemporary anthropogenic impacts. Dispersal limitations, coupled with its biological traits, suggest that local populations are vulnerable to environmental disturbance with limited potential for natural recolonisation following population decline. We discuss the implications of these findings in the context of managing the recovery of the species.

Recovery of estuaries following disturbance by pollutants

The recovery of a heavily polluted estuary was assessed by comparing the structure of its intertidal community with six other estuaries. Results indicated that some recovery had occurred, however improvements in the study methodology were required to further clarify the ecological status of the creek.

Influence of disturbance on threatened fauna and associated habitat, Victoria

Results of fauna and vegetation surveys conducted around Portland Aluminium smelter between 1979 and 2004 found small mammal abundance and diversity had declined and changes in vegetation communities were related to changes in fire patterns, vegetation fragmentation and weed invasion. Small mammal numbers were greater in nearby National Parks.

Modelling behavioural and fitness consequences of disturbance for geese along their spring flyway

1. For migratory birds the implications of environmental change may be difficult to predict because they use multiple sites during their annual cycle. Moreover, the migrants’ use of these sites may be interdependent. Along the flyway of the Svalbard pink-footed goose Anser brachyrhynchus population, Norwegian farmers use organized scaring to minimize goose use of their grasslands in spring. We assessed the consequences of this practice for regional site use of pink-footed geese along their spring migration route.

2. We used dynamic programming to find the sequence of migratory decisions that maximizes the fitness of female geese during spring migration, assuming scaring impinges on both food-intake rates and predation risk. The parameterization of the model was based on data gathered from individually marked pink-footed geese between 1991 and 2003.

3. The effect of scaring in terms of fitness and site use was most noticeable regarding food-intake rate. Scaring resulted in a redistribution of geese along the flyway. Furthermore, the outcomes of the modelling exercises were highly dependent on whether or not the geese were omniscient or naive: at moderate scaring levels naive geese were predicted to succumb.

4. On a qualitative basis there was good correspondence between the predictions from the model and the empirical evidence gathered to date.

5. Synthesis and applications. Besides highlighting the importance of learning and changing behaviour in an adaptive fashion, our modelling exercise indicated the potential vulnerability of the geese to abrupt environmental change. In addition, the exercise emphasized the interdependence of site use along the migratory flyway. The model supports the necessity for an integrated flyway management approach. In Norway, discussion is ongoing about the future management of the spring conflict between farming interests and geese. Farmers in north and mid-Norway have announced that they will expand the scaring campaign if a long-term solution, including a compensation scheme, is not forthcoming. If scaring on such a large scale is implemented abruptly, it may have severe consequences for the population: management of both the scaring intensity and its geographical extent is urgently required.

Do birdwatchers care about bird disturbance?

Little is known about how non-consumptive recreationists perceive their impacts on animals and how this relates to recreationist behavior. We surveyed attitudes and behaviors relating to bird disturbance of 179 birdwatchers who visited a world-renowned, restricted-access birdwatching destination (the Western Treatment Plant [WTP], Victoria, Australia). We distributed a 10-page, 49-question survey to birdwatchers at the WTP and posted it to a mailing list of those who held birdwatching access permits. The questionnaire explored socio-demographic profiles of respondents, and their bird- watching behaviors and attitudes to bird disturbance. Birdwatchers regarded vehicles as particularly disturbing and some bird groups, and breeding birds, as especially sensitive to disturbance. They generally disagreed with the contention that birdwatchers and plant workers disturb birds. All respondents reported using strategies to mitigate bird disturbance (e.g., keeping quiet and distant). Those who adopted more strategies to mitigate disturbance agreed more with the contention that birdwatchers and workers cause disturbance, and that breeding birds are especially sensitive to disturbance. Our results suggest that birdwatchers who perceive that their activity disturbs birds are more likely to modify their behaviors to minimize the disturbance. As such, wildlife managers and educators must clearly communicate possible impacts of birdwatching to birdwatchers to maximize the uptake of ethical birdwatching practices.

Recovery pathways from small-scale disturbance in a temperate Australian seagrass

Recovery from disturbance is a key element of ecosystem persistence, and recovery can be influenced by large-scale regional differences and smaller local-scale variations in environmental conditions. Seagrass beds are an important yet threatened nearshore habitat and recover from disturbance by regrowth, vegetative extension and dispersive propagules. We described recovery pathways from small-scale disturbances in the seagrass Zostera nigricaulis in Port Phillip Bay, a large embayment in southeastern Australia, and tested whether these pathways differed between 5 regions with different hydrodynamic conditions and water quality, and between sites within those regions. Recovery pathways were broadly consistent. When aboveground biomass was removed, recovery, defined as the point at which disturbed areas converged with undisturbed controls, took from 2 to 8 mo, but when we removed above-and below-ground biomass, it took between 2 and 13 mo. There was no evidence of recovery resulting from sexual reproduction at any sites regardless of the presence of seeds in the sediment or flower production. We found no differences in recovery at the regional scale, but we found substantial differences between local sites. At some sites, rapid recovery occurred because seagrasses grew quickly, but at others, apparent recovery occurred because regrowth coincided with overall declines in cover of undisturbed areas. Recovery time was unrelated to seagrass canopy height, biomass, percentage cover, stem density, seed bank density, epiphyte cover or sediment organic matter in seagrass adjacent to disturbance experiments. This study highlights the importance of understanding fine-scale variation in local recovery mechanisms, which may override or obscure any regional signal.

Complex responses of birds to landscape-level fire extent, fire severity and environmental drivers

Aim: To quantify bird responses to a large unplanned fire, taking into consideration landscape-level fire severity and extent, pre-fire site detection frequency and environmental gradients. Location: South-eastern Australia. Methods: A major wildfire in 2009 coincided with a long-term study of birds and provided a rare opportunity to quantify bird responses to wildfire. Using hierarchical Bayesian analysis, we modelled bird species richness and the detection frequency of individual species in response to a suite of explanatory variables, including (1) landscape-level fire severity and extent (2) pre-fire detection frequency, (3) site-level vegetation density and (4) environmental variables (e.g. elevation and topography). Results: Landscape-level fire severity had strong effects on bird species richness and the detection frequency of the majority of bird species. These effects varied markedly between species; most responded negatively to amount of severely burned forest in the landscape, one negatively to the amount of moderately burned forest and one responded negatively to the total area of burned forest. Only one species - the Flame Robin - responded positively to the amount of burned forest. Relationships with landscape-scale fire extent changed over time for one species - the Brown Thornbill - with initially depressed rates of detection recovering after just 2 years. The majority of species were significantly more likely to be detected in burned areas if they have been recorded there prior to the fire. Main conclusions: Birds responded strongly to the severity and spatial extent of fire. They also exhibited strong site fidelity even after severe wildfire which causes profound changes in vegetation cover - a response likely influenced by environmental features such as elevation and topography.

The dynamic regeneration niche of a forest following a rare disturbance event

Aim: Knowledge of how climate and fire regimes affect regeneration in foundation species is critical to the conservation of entire ecosystems. Different stages of regeneration often require different ecological conditions, but dynamic constraints on regeneration are poorly known for species that regenerate only after infrequent wildfires. Focussing on a long-lived, foundation tree species (Eucalyptus regnans), we tested the hypothesis that the relative importance of fire regime variables (fire severity and time since previous fire) and environmental gradients on post-fire regeneration would shift as seedlings developed. Location: South-eastern Australia. Methods: Following a large (> 59,000 ha) summer wildfire in 2009, we sampled 131 sites (61 burnt) annually for four years (2009-2012), representing the range of environmental conditions in which E. regnans occurs. We analysed the effect of fire severity, time since fire and environmental variables on early regeneration processes critical for post-fire species distributions: seedling establishment, seedling density and growth through different height stages (10 cm, 25 cm, 50 cm and 200 cm). Results: The regeneration niche of E. regnans was defined by different factors at different stages of development. Initially, seedlings established prolifically on burnt sites, regardless of severity. Three years into the regeneration process, high-severity fire became the dominant driver of seedling persistence and growth over 25 cm. Growth over 50 cm was dependent on environmental conditions relating to elevation and precipitation. Main conclusions: Our results describe how fire occurrence, fire severity and environmental gradients affected seedling establishment, persistence and growth. The dynamic constraints on regeneration likely reflect temporal changes in the biotic and abiotic environment and variation in resource requirements during the early post-fire years. Our findings will enable more accurate forecasts of species distributions to assist forest conservation in the face of global changes in climate and fire regimes.