Importance of terrestrial subsidies for estuarine food webs in contrasting east African catchments

Little is known on the degree to which terrestrial organic matter delivered to tropical estuaries contributes to estuarine consumers. Here, stable isotope analysis is used to constrain this contribution for contrasting east African estuaries whose catchments differ in relative C3/C4 vegetation cover. As these two types of vegetation differ strongly in δ13C, we anticipated that terrestrial subsidies would be reflected in a gradient in estuarine consumer δ13C values, following the relative importance of C3 (characterised by low δ13C) vs. C4 (characterised by high δ13C) cover. Five estuaries were sampled for aquatic biogeochemical parameters, primary producers and consumers of different trophic ecologies: the Zambezi (catchment with a C3/C4 cover of 61/39%) in Mozambique, the Tana in Kenya (36/64%) and the Betsiboka (42/58%), Rianila (85/15%) and Canal des Pangalanes (C3-dominated) in Madagascar. Sampling was done before and after the 2010/2011 wet season. There were positive relationships between the proportion of C4 cover in the catchment and turbidity, δ13CDIC, δ13CDOC, δ13CPOC and δ15NPN. There were also significant positive relationships between δ13CPOC and consumer δ13C and between δ15NPN and consumer δ15N for all consumer trophic guilds, confirming the incorporation of organic material transported from the catchments by estuarine consumers, and implying that this material is transported up to high trophic level fish. Bayesian mixing models confirmed that C4 material was the most important source for the highly turbid, C4-dominated estuaries, contributing up to 61–91% (95% CI) to phytodetritivorous fish in the Betsiboka, whereas for the less turbid C3-dominated estuaries terrestrial subsidies were not as important and consumers relied on a combination of terrestrial and aquatic sources. This shows that the ecology of the overall catchment affects the estuaries at the most basic, energetic level, and activities that alter the turbidity and productivity of rivers and estuaries can affect food webs well beyond the area of impact.

Implications of climate change for macrophytic rafts and their hitchhikers

Most models predicting changes to species distributions under future climate scenarios ignore dispersal processes, despite their importance in determining community structure in both terrestrial and aquatic systems ('supply-side ecology'). In the marine environment, facilitation of long-distance dispersal of coastal organisms by macrophytic rafts may be severely modified by climate impacts on raft supply, quality, and persistence, and on transport processes. Increasing storminess in the coastal zone, higher water temperatures, and changes in water circulation represent some of the key mechanisms that will directly affect rafts, while increases in herbivore metabolism due to higher water temperatures are likely to indirectly reduce raft longevity through raft consumption. Accurate predictions of climate impacts on coastal biodiversity will be con - tingent on resolution of factors influencing rafting so that this and other dispersal mechanisms can be incorporated into species distribution models. © 2011 Inter-Research.

Riparian reforestation: are there changes in soil carbon and soil microbial communities?

Reforestation of pastures in riparian zones has the potential to decrease nutrient runoff into waterways, provide both terrestrial and aquatic habitat, and help mitigate climate change by sequestering carbon (C). Soil microbes can play an important role in the soil C cycle, but are rarely investigated in studies on C sequestration. We surveyed a chronosequence (0-23years) of mixed-species plantings in riparian zones to investigate belowground (chemical and biological) responses to reforestation. For each planting, an adjacent pasture was surveyed to account for differences in soil type and land-use history among plantings. Two remnant woodlands were included in the survey as indicators of future potential of plantings. Both remnant woodlands had significantly higher soil organic C (SOC) content compared with their adjacent pastures. However, there was no clear trend in SOC content among plantings with time since reforestation. The substantial variability in SOC sequestration among plantings was possibly driven by differences in soil moisture among plantings and the inherent variability of SOC content among reference pastures adjacent to plantings. Soil microbial phospholipid fatty acids (PLFA, an indicator of microbial biomass) and activities of decomposition enzymes (β-glucosidase and polyphenol oxidase) did not show a clear trend with increasing planting age. Despite this, there were positive correlations between total SOC concentration and microbial indicators (total PLFA, fungal PLFA, bacterial PLFA and activities of decomposition enzymes) across all sites. The soil microbial community compositions (explored using PLFA markers) of older plantings were similar to those of remnant woodlands. There was a positive correlation between the soil carbon:nitrogen (C:N) and fungal:bacterial (F:B) ratios. These data indicate that in order to maximise SOC sequestration, we need to take into account not only C inputs, but the microbial processes that regulate SOC cycling as well.

Urbanisation and the ecology of powerful owls ninox strenua in outer Melbourne, Victoria

Historically, the Powerful Owl (Ninox strenua) has been seen as a southeastern Australian species restricted to, or most numerous in, dense gullies of tall open forests in hilly or mountainous areas of the coast and Great Divide. However, recent research has revealed that Powerful Owls may breed numerously and successfully in a wider range of habitats than previously believed, including the forests and woodlands within the metropolitan areas of some major cities.Here we report on the breeding of a number of pairs of Powerful Owls in the Yarra Valley, Victoria. Study sites ranged from relatively undisturbed, wet sclerophyll forest 80 km from central Melbourne, through dry sclerophyll, eucalypt-dominated open forest with some disturbance, to a highly disturbed urban parkland only 18 km from central Melbourne. We found that Powerful Owls breed successfully in some urban areas, but are limited in the amount of human disturbance they can tolerate near their nesting hollow. In the most heavily utilized section of the urban parkland, all breeding attempts were unsuccessful and in one year the young were apparently eaten by one of the parents. This followed construction of a timber boardwalk under the nest tree during the breeding season. The Powerful Owls subsequently moved to a more secluded nesting hollow and raised two young. Recommendations for management of Powerful Owls in urban areas are discussed in the context
of these results.

Linshuichonetes gen. nov., a new rugosochonetid (Brachiopoda) genus from the Liangshan Formation (Early Permian) in Sichuan, China, and its ecology

A new genus and species, Linshuichonetes elfinis, belonging to the Rugosochonetidae, is described from the Early Permian (Late Artinskian or early Kungurian) Liangshan Formation of the Yangtze block. The new genus is defined externally by the presence of fine, but delayed, capillation and a weak or absent median sulcus and fold and by the presence of a distinct posteromedian sinus on the ventral umbo; and internally by a lack of median, lateral and accessory septa in the dorsal interior; absence of vascular trunks in the ventral interior and the presence of distinct radiating rows of papillae in the interior of both valves, particularly an unusual clustered arrangement of papillae on the posteromedian portion of the dorsal interior. The local environment during the deposition of the Liangshan Formation appears to have been a restricted tidal flat or lagoon which experienced frequent sealevel fluctuations associated with the onset of the Yanghsingian transgression. The new species, L. elfinis, appears to have several morphological adaptations enabling successful exploitation of this environment. It was typically a very small and thin-valved species with a high surface area to volume ratio, an advantage in an oxygen restricted environment. The small size and numerous body spinules would have aided individuals to remain suspended at the top of the fine, soft substrate. It also dominated the brachiopod assemblage in the Liangshan Formation, comprising up to 94%of specimens within a bed. These factors indicate that the new species appears to be an opportunistic species.

A checklist for ecological management of landscapes for conservation

The management of landscapes for biological conservation and ecologically sustainable natural resource use are crucial global issues. Research for over two decades has resulted in a large literature, yet there is little consensus on the applicability or even the existence of general principles or broad considerations that could guide landscape conservation. We assess six major themes in the ecology and conservation of landscapes. We identify 13 important issues that need to be considered in developing approaches to landscape conservation. They include recognizing the importance of landscape mosaics (including the integration of terrestrial and aquatic areas), recognizing interactions between vegetation cover and vegetation configuration, using an appropriate landscape conceptual model, maintaining the capacity to recover from disturbance and managing landscapes in an adaptive framework. These considerations are influenced by landscape context, species assemblages and management goals and do not translate directly into on-the-ground management guidelines but they should be recognized by researchers and resource managers when developing guidelines for specific cases. Two crucial overarching issues are: (i) a clearly articulated vision for landscape conservation and (ii) quantifiable objectives that offer unambiguous signposts for measuring progress.

Pollutants increase song complexity and the volume of the brain area HVC in a songbird

Environmental pollutants which alter endocrine function are now known to decrease vertebrate reproductive success. There is considerable evidence for endocrine disruption from aquatic ecosystems, but knowledge is lacking with regard to the interface between terrestrial and aquatic ecosystems. Here, we show for the first time that birds foraging on invertebrates contaminated with environmental pollutants, show marked changes in both brain and behaviour. We found that male European starlings (Sturnus vulgaris) exposed to environmentally relevant levels of synthetic and natural estrogen mimics developed longer and more complex songs compared to control males, a sexually selected trait important in attracting females for reproduction. Moreover, females preferred the song of males which had higher pollutant exposure, despite the fact that experimentally dosed males showed reduced immune function. We also show that the key brain area controlling male song complexity (HVC) is significantly enlarged in the contaminated birds. This is the first evidence that environmental pollutants not only affect, but paradoxically enhance a signal of male quality such as song. Our data suggest that female starlings would bias their choice towards exposed males, with possible consequences at the population level. As the starling is a migratory species, our results suggest that transglobal effects of pollutants on terrestrial vertebrate physiology and reproduction could occur in birds.

Fire, energy, and the ecology of reptiles in semi-arid Australia

‬Fire dependent ecosystems cover over half of the world's land surface. Understanding the factors that determine the distribution of fauna in these systems is essential to biodiversity conservation. This thesis explores the ecology of reptiles in a fire-prone region.

Granitic coastal geomorphology: Applying integrated terrestrial and bathymetric LiDAR with multibeam sonar to examine coastal landscape evolution

Coasts composed of resistant lithologies such as granite are generally highly resistant to erosion. They tend to evolve over multiple sea level cycles with highstands acting to remove subaerially weathered material. This often results in a landscape dominated by plunging cliffs with shore platforms rarely occurring. The long-term evolution of these landforms means that throughout the Quaternary these coasts have been variably exposed to different sea level elevations which means erosion may have been concentrated at different elevations from today. Investigations of the submarine landscape of granitic coasts have however been hindered by an inability to accurately image the nearshore morphology. Only with the advent of multibeam sonar and aerial laser surveying can topographic data now be seamlessly collected from above and below sea level. This study tests the utility of these techniques and finds that very accurate measurements can be made of the nearshore thereby allowing researchers to study the submarine profile with the same accuracy as the subaerial profile. From a combination of terrestrial and marine LiDAR data with multibeam sonar data, it is found that the morphology of granite domes is virtually unaffected by erosion at sea level. It appears that evolution of these landscapes on the coast is a very slow process with modern sea level acting only to remove subaerially weathered debris. The size and orientation of the joints determines the erosional potential of the granite. Where joints are densely spaced (<2 m apart) or the bedrock is highly weathered can semi-horizontal surfaces form.

Flying, fasting, and feeding in birds during migration: a nutritional and physiological ecology perspective

Unlike exercising mammals, migratory birds fuel very high intensity exercise (e.g., flight) with fatty acids delivered from the adipose tissue to the working muscles by the circulatory system. Given the primary importance of fatty acids for fueling intense exercise, we discuss the likely limiting steps in lipid transport and oxidation for exercising birds and the ecological factors that affect the quality and quantity of fat stored in wild birds. Most stored lipids in migratory birds are comprised of three fatty acids (16:0, 18:1 and 18:2) even though migratory birds have diverse food habits. Diet selection and selective metabolism of lipids play important roles in determining the fatty acid composition of birds which, in turn, affects energetic performance during intense exercise. As such, migratory birds offer an intriguing model for studying the implications of lipid metabolism and obesity on exercise performance. We conclude with a discussion of the energetic costs of migratory flight and stopover in birds, and its implications for bird migration strategies.

Life history and the ecology of stress: how do glucocorticoid hormones influence life-history variation in animals?

Glucocorticoids hormones (GCs) are intuitively important for mediation of age-dependent vertebrate life-history transitions through their effects on ontogeny alongside underpinning variation in life-history traits and trade-offs in vertebrates. These concepts largely derive from the ability of GCs to alter energy allocation, physiology and behaviour that influences key life-history traits involving age-specific life-history transitions, reproduction and survival. Studies across vertebrates have shown that the neuroendocrine stress axis plays a role in the developmental processes that lead up to age-specific early life-history transitions. While environmental sensitivity of the stress axis allows for it to modulate the timing of these transitions within species, little is known as to how variation in stress axis function has been adapted to produce interspecific variation in the timing of life-history transitions. Our assessment of the literature confirms that of previous reviews that there is only equivocal evidence for correlative or direct functional relationships between GCs and variation in reproduction and survival. We conclude that the relationships between GCs and life-history traits are complex and general patterns cannot be easily discerned with current research approaches and experimental designs. We identify several future research directions including: (i) integration of proximate and ultimate measures, including longitudinal studies that measure effects of GCs on more than one life-history trait or in multiple environmental contexts, to test explicit hypotheses about how GCs and life-history variation are related and (ii) the measurement of additional factors that modulate the effects of GCs on life-history traits (e.g. GC receptors and binding protein levels) to better infer neurendocrine stress axis actions. Conceptual models of HPA/I axis actions, such as allostatic load and reactive scope, to some extent explicitly predict the role of GCs in a life-history context, but are descriptive in nature. We propose that GC effects on life-history transitions, survival probabilities and fecundity can be modelled in existing quantitative demographic frameworks to improve our understanding of how GC variation influences life-history evolution and GC-mediated effects on population dynamics Lay Summary Functional Ecology

Habitat use throughout migration : linking individual consistency, prior breeding success and future breeding potential

1. Habitat use can influence individual performance in a wide range of animals, either immediately or through carry-over effects in subsequent seasons. Given that many animal species also show consistent individual differences in reproductive success, it seems plausible that individuals may have consistent patterns of habitat use representing individual specializations, with concomitant fitness consequences.

2. Stable-carbon isotope ratios from a range of tissues were used to discern individual consistency in habitat use along a terrestrial–aquatic gradient in a long-distance migrant, the Bewick’s swan (Cygnus columbianus bewickii). These individual specialisations represented <15% of the isotopic breadth of the population for the majority of individuals and were seen to persist throughout autumn migration and overwintering until aquatic habitats were no longer available.

3. Individual foraging specialisations were then used to demonstrate two consecutive carry-over effects associated with macroscale habitat segregation: consequences of breeding season processes for autumn habitat use; and consequences of autumn habitat use for future reproductive success. Adults that were successful breeders in the year of capture used terrestrial habitats significantly more than adults that were not successful, revealing a substantial cost of reproduction and extended parental care. Use of aquatic habitats during autumn was, however, associated with increased body condition prior to spring migration; and increased subsequent breeding success in adults that had been unsuccessful the year before. Yet adults that were successful breeders in the year of capture remained the most likely to be successful the following year, despite their use of terrestrial habitats.

4. Our results uniquely demonstrate not only individual foraging specializations throughout the migration period, but also that processes during breeding and autumn migration, mediated by individual consistency, may play a fundamental role in the population dynamics of long-distance migrants. These findings, therefore, highlight the importance of long-term consistency to our understanding of habitat function, interindividual differences in fitness, population dynamics and the evolution of migratory strategies.

Nutrients in Pirron Yallock Creek, southwestern Victoria : paleolimnological and management considerations

The concentrations of various forms of nitrogen and phosphorus in the main stream and selected tributaries of Pirron Yallock Creek, southwestern Victoria were examined over a two-year period. Exceedingly high levels of both nutrients were found within a particular tributary, while generally high nutrient levels were observed throughout the catchment. The speciation results indicated that dairy effluent was the primary source of nutrients to Pirron Yallock Creek. A palaeolimnological study was undertaken to determine the impact of European settlement upon waterway nutrient concentrations within the region. The palaeolimnological study focused primarily on the diatom flora preserved within the sediments of nearby Lakes Corangamite and Bullen Merri. Lack of preservation of diatoms within the sediments of Lake Corangamite resulted in no water quality inferences for this lake. The preserved diatoms within Lake Bullen Merri suggested an increase in trophic status of this lake during the last 500 years. While a change in the diatom flora of Lake Bullen Merri was evident, it was not possible to differentiate the impact of European settlement upon nutrient status of this waterway from long-term trophic status change. In light of the particularly high nutrient concentrations observed in Pirron Yallock Creek, improved nutrient management strategies are proposed for the catchment. These strategies, which consider current nutrient management activities, are predominantly focussed on the dairy industry, which occupies the majority of the catchment.