Evaluation of glucose dehydrogenase and pyrroloquinoline quinine (pqq) mutagenesis that renders functional inadequacies in host plants

The rhizospheric zone abutting plant roots usually clutches a wealth of microbes. In the recent past, enormous genetic resources have been excavated with potential applications in host plant interaction and ancillary aspects. Two Pseudomonas strains were isolated and identified through 16S rRNA and rpoD sequence analyses as P. fluorescens QAU67 and P. putida QAU90. Initial biochemical characterization and their root-colonizing traits indicated their potential role in plant growth promotion. Such aerobic systems, involved in gluconic acid production and phosphate solubilization, essentially require the pyrroloquinoline quinine (PQQ)- dependent glucose dehydrogenase (GDH) in the genome. The PCR screening and amplification of GDH and PQQ and subsequent induction of mutagenesis characterized their possible role as antioxidants as well as in growth promotion, as probed in vitro in lettuce and in vivo in rice, bean, and tomato plants. The results showed significant differences (p ≤ 0.05) in parameters of plant height, fresh weight, and dry weight, etc., deciphering a clear and in fact complementary role of GDH and PQQ in plant growth promotion. Our study not only provides direct evidence of the in vivo role of GDH and PQQ in host plants but also reveals their functional inadequacy in the event of mutation at either of these loci.

Eri silk fibre attributes and sliver preparation

Eri silk produced by Philosamia cynthia ricini silkworm is a fibre not well-known to the silk industry, in spite of the fact that Eri silk is finer, softer, and has better mechanical and thermal properties than most animal fibres. Eri silk has a high commercial potential, as the host plants of Eri silk worms are widespread in diverse geographical locations, and the worms also have a higher degree of disease resistance than most other silk worms. Mills are often not aware of the properties of Eri for designing appropriate end products. Thus, Eri silk yarn is traditionally produced by hand spinning, and Eri silk usually ends up as material for handwoven shawls. The potential for bulk fibre processing and the development of soft luxurious novel Eri silk products is yet to be discovered. To better understand the material and its processing behaviour, Eri silk was characterised and cocoons were processed into tops through degumming, opening, and cutting filaments into different lengths, followed by a worsted spun silk processing route. Fibre properties such as fineness, crimp, strength and length at different processing stages up to combed tops were measured. The results indicate that staple Eri silk can be processed via the worsted topmaking route, using a cut length of 200 mm or 150 mm for filament sheets prepared from degummed cocoons.

UV-induced DNA damage promotes resistance to the biotrophic pathogen Hyaloperonospora parasitica in Arabidopsis

Plant innate immunity to pathogenic microorganisms is activated in response to recognition of extracellular or intracellular pathogen molecules by transmembrane receptors or resistance proteins, respectively. The defense signaling pathways share components with those involved in plant responses to UV radiation, which can induce expression of plant genes important for pathogen resistance. Such intriguing links suggest that UV treatment might activate resistance to pathogens in normally susceptible host plants. Here, we demonstrate that pre-inoculative UV (254 nm) irradiation of Arabidopsis (Arabidopsis thaliana) susceptible to infection by the biotrophic oomycete Hyaloperonospora parasitica, the causative agent of downy mildew, induces dose- and time-dependent resistance to the pathogen detectable up to 7 d after UV exposure. Limiting repair of UV photoproducts by postirradiation incubation in the dark, or mutational inactivation of cyclobutane pyrimidine dimer photolyase, (6-4) photoproduct photolyase, or nucleotide excision repair increased the magnitude of UV-induced pathogen resistance. In the absence of treatment with 254-nm UV, plant nucleotide excision repair mutants also defective for cyclobutane pyrimidine dimer or (6-4) photoproduct photolyase displayed resistance to H. parasitica, partially attributable to short wavelength UV-B (280–320 nm) radiation emitted by incubator lights. These results indicate UV irradiation can initiate the development of resistance to H. parasitica in plants normally susceptible to the pathogen and point to a key role for UV-induced DNA damage. They also suggest UV treatment can circumvent the requirement for recognition of H. parasitica molecules by Arabidopsis proteins to activate an immune response.

Taxonomy of two new species of gall midge (Diptera : Cecidomyiidae) infesting Tecticornia arbuscula (Salicornioideae : Chenopodiaceae) in Australian saltmarshes

Two new species of gall midge associated with two leaf galls on the branched, perennial shrub Tecticornia arbuscula are described from saltmarshes in south-eastern Australia. The infestations caused by the new species hinder the growth of T. arbuscula which can impact on the critically endangered Orange Bellied Parrot (Neophema chrysogaster): T. arbuscula provides perching and roosting sites and the seeds are the major food source for this bird. Asphondylia tecticorniae sp. n. Veenstra & Kolesik transforms leaf segments into single-chambered, spherical galls, whereas Asphondylia peelei sp. n. Veenstra & Kolesik produces a multi-chambered, asymmetrical gall on leaves of the same plant. Both galls have fungal mycelium lining the inner surface of the larval chamber where it is presumably grazed on by the larva. Descriptions of the larvae, pupae, males, females and geographical distribution of the two gall midges in south-eastern Australia are given. Differences in the level of parasitoid infestation of four Asphondylia species feeding on Australian Chenopodiaceae in relation to putative oviposition sites on the host plants are explored.

The restricted seed rain of a mistletoe specialist

Specialist frugivores are the dominant consumers of mistletoe fruit in many regions and have been shown to intensify infections of host plants as a result of their rapid gut passage rates and dependence on existing infections. The role of specialist frugivores in long distance dispersal of mistletoe and establishment of new infections is unclear, and has not been explicitly evaluated previously. Here we critically examine the premise that specialists are the dominant dispersers by examining the role of an Australian mistletoe specialist (mistletoebird Dicaeum hirundinaceum Dicaeidae) in dispersing mistletoe (Amyema preissii Santalales: Loranthaceae) seeds beyond infected host stands. We use two primary lines of evidence - presence of birds using remote call recorders, and presence of dispersed seeds via surveys for defecated seeds on host branches. The observed and inferred movements of the mistletoebird were wholly restricted to habitat patches containing mistletoe, and this bird was not observed to transport seeds to nearby uninfected host stands within the study system. While mistletoe specialists may provide much of the within-stand dispersal service for mistletoes, this serves only to aggregate and intensify existing infections. We suggest that long distance dispersal of mistletoe seeds beyond existing hosts and infection centres is not performed by these dietary specialists, these services more likely to be provided by generalist frugivores and other occasional mistletoe fruit consumers.

Fungi associated with Asphondylia (Diptera : Cecidomyiidae) galls on Sarcocornia quinqueflora and Tecticornia arbuscula (Chenopodiaceae)

Galls induced by the gall-forming midges Asphondylia floriformis and A. sarcocorniae on Sarcocornia quinqueflora, and A. tecticorniae and A. peelei on Tecticornia arbuscula, were collected from two sites nearMelbourne, Victoria. Microfungi belonging to a broad range of families were found to be associated with external surfaces of galls and Journal Articles of Sarcocornia quinqueflora. However, only Botryosphaeria dothidea was isolated from the fungal mycelium lining gall-midge larval chambers of all four Asphondylia species, on both host plants

Mitochondrial DNA analysis of field populations of Helicoverpa armigera (Lepidoptera : Noctuidae) and of its relationship to H. zea

Background
Helicoverpa armigera and H. zea are amongst the most significant polyphagous pest lepidopteran species in the Old and New Worlds respectively. Separation of H. armigera and H. zea is difficult and is usually only achieved through morphological differences in the genitalia. They are capable of interbreeding to produce fertile offspring. The single species status of H. armigera has been doubted, due to its wide distribution and plant host range across the Old World. This study explores the global genetic diversity of H. armigera and its evolutionary relationship to H zea.

Results
We obtained partial (511 bp) mitochondrial DNA (mtDNA) Cytochrome Oxidase-I (COI) sequences for 249 individuals of H. armigera sampled from Australia, Burkina Faso, Uganda, China, India and Pakistan which were associated with various host plants. Single nucleotide polymorphisms (SNPs) within the partial COI gene differentiated H. armigera populations into 33 mtDNA haplotypes. Shared haplotypes between continents, low F-statistic values and low nucleotide diversity between countries (0.0017 – 0.0038) suggests high mobility in this pest. Phylogenetic analysis of four major Helicoverpa pest species indicates that H. punctigera is basal to H. assulta, which is in turn basal to H. armigera and H. zea. Samples from North and South America suggest that H. zea is also a single species across its distribution. Our data reveal short genetic distances between H. armigera and H. zea which seem to have been established via a founder event from H. armigera stock at around 1.5 million years ago.

Conclusion
Our mitochondrial DNA sequence data supports the single species status of H. armigera across Africa, Asia and Australia. The evidence for inter-continental gene flow observed in this study is consistent with published evidence of the capacity of this species to migrate over long distances. The finding of high genetic similarity between Old World H. armigera and New World H. zea emphasises the need to consider work on both pests when building pest management strategies for either.

Viral RNA silencing suppressors (RSS) : novel strategy of viruses to ablate the host RNA interference (RNAi) defense system

Pathogenic viruses have developed a molecular defense arsenal for their survival by counteracting the host anti-viral system known as RNA interference (RNAi). Cellular RNAi, in addition to regulating gene expression through microRNAs, also serves as a barrier against invasive foreign nucleic acids. RNAi is conserved across the biological species, including plants, animals and invertebrates. Viruses in turn, have evolved mechanisms that can counteract this anti-viral defense of the host. Recent studies of mammalian viruses exhibiting RNA silencing suppressor (RSS) activity have further advanced our understanding of RNAi in terms of host–virus interactions. Viral proteins and non-coding viral RNAs can inhibit the RNAi (miRNA/siRNA) pathway through different mechanisms. Mammalian viruses having dsRNA-binding regions and GW/WG motifs appear to have a high chance of conferring RSS activity. Although, RSSs of plant and invertebrate viruses have been well characterized, mammalian viral RSSs still need in-depth investigations to present the concrete evidences supporting their RNAi ablation characteristics. The information presented in this review together with any perspective research should help to predict and identify the RSS activity-endowed new viral proteins that could be the potential targets for designing novel anti-viral therapeutics.

Ribosome inactivating proteins from plants inhibiting viruses

Many plants contain ribosome inactivating proteins (RIPs) with N-glycosidase activity, which depurinate large ribosomal RNA and arrest protein synthesis. RIPs so far tested inhibit replication of mRNA as well as DNA viruses and these proteins, isolated from plants, are found to be effective against a broad range of viruses such as human immunodeficiency virus (HIV), hepatitis B virus (HBV) and herpes simplex virus (HSV). Most of the research work related to RIPs has been focused on antiviral activity against HIV; however, the exact mechanism of antiviral activity is still not clear. The mechanism of antiviral activity was thought to follow inactivation of the host cell ribosome, leading to inhibition of viral protein translation and host cell death. Enzymatic activity of RIPs is not limited to depurination of the large rRNA, in addition they can depurinate viral DNA as well as RNA. Recently, Phase I/II clinical trials have demonstrated the potential use of RIPs for treating patients with HIV disease. The aim of this review is to focus on various RIPs from plants associated with anti-HIV activity.