An iterative equalization method for nonirreducible MIMO FIR channels

This paper deals with the equalization of a nonirreducible multiple-input multiple-output (MIMO) finite-impulse-response (FIR) channel provided that the estimate of the channel matrix is available. An iterative method is developed to perform the channel equalization. The effectiveness of the proposed equalization method is demonstrated by simulation examples.

An iterative approach of protein function prediction

Background: Current approaches of predicting protein functions from a protein-protein interaction (PPI) dataset are based on an assumption that the available functions of the proteins (a.k.a. annotated proteins) will determine the functions of the proteins whose functions are unknown yet at the moment (a.k.a. un-annotated proteins). Therefore, the protein function prediction is a mono-directed and one-off procedure, i.e. from annotated proteins to un-annotated proteins. However, the interactions between proteins are mutual rather than static and mono-directed, although functions of some proteins are unknown for some reasons at present. That means when we use the similarity-based approach to predict functions of un-annotated proteins, the un-annotated proteins, once their functions are predicted, will affect the similarities between proteins, which in turn will affect the prediction results. In other words, the function prediction is a dynamic and mutual procedure. This dynamic feature of protein interactions, however, was not considered in the existing prediction algorithms.

Results: In this paper, we propose a new prediction approach that predicts protein functions iteratively. This iterative approach incorporates the dynamic and mutual features of PPI interactions, as well as the local and global semantic influence of protein functions, into the prediction. To guarantee predicting functions iteratively, we propose a new protein similarity from protein functions. We adapt new evaluation metrics to evaluate the prediction quality of our algorithm and other similar algorithms. Experiments on real PPI datasets were conducted to evaluate the effectiveness of the proposed approach in predicting unknown protein functions.

Conclusions: The iterative approach is more likely to reflect the real biological nature between proteins when predicting functions. A proper definition of protein similarity from protein functions is the key to predicting functions iteratively. The evaluation results demonstrated that in most cases, the iterative approach outperformed non-iterative ones with higher prediction quality in terms of prediction precision, recall and F-value.

Multicast lifetime maximization using network coding in lossy wireless ad-hoc networks

In traditional stop-and-wait strategy for reliable communications, such as ARQ, retransmission for the packet loss problem would incur a great number of packet transmissions in lossy wireless ad-hoc networks. We study the reliable multicast lifetime maximization problem by alternatively exploring the random linear network coding in this paper. We formulate such problem as a min-max problem and propose a heuristic algorithm, called maximum lifetime tree (MLT), to build a multicast tree that maximizes the network lifetime. Simulation results show that the proposed algorithms can significantly increase the network lifetime when compared with the traditional algorithms under various distributions of error probability on lossy wireless links.

Unicast and broadcast throughput maximization in amplify-and-forward relay networks

Cooperative communication (CC) offers an efficient and low-cost way to achieve spatial diversity by forming a virtual antenna array among single-antenna nodes that cooperatively share their antennas. It has been well recognized that the selection of relay nodes plays a critical role in the performance of CC. Most existing relay selection strategies focus on optimizing the outage probability or energy consumption. To fill in the vacancy of research on throughput improvement via CC, we study the relay selection problem with the objective of optimizing the throughput in this paper. For unicast, it is a P problem, and an optimal relay selection algorithm is provided with a correctness proof. For broadcast, we show the challenge of relay selection by proving it nonprobabilistic hard (NP-hard). A greedy heuristic algorithm is proposed to effectively choose a set of relay nodes that maximize the broadcast throughput. Simulation results show that the proposed algorithms can achieve high throughput under various network settings.

The raft-promoting property of virion-associated cholesterol, but not the presence of virion-associated brij 98 rafts, is a determinant of human immunodeficiency virus type 1 infectivity

Lipid rafts are enriched in cholesterol and sphingomyelin and are isolated on the basis of insolubility in detergents, such as Brij 98 and Triton X-100. Recent work by Holm et al. has shown that rafts insoluble in Brig 98 can be found in human immunodeficiency virus type 1 (HIV-1) virus-like particles, although it is not known whether raft-like structures are present in authentic HIV-1 and it is unclear whether a virion-associated raft-like structure is required for HIV replication. Independently, it was previously reported that virion-associated cholesterol is critical for HIV-1 infectivity, although the specific requirement of virion cholesterol in HIV-1 was not examined. In the present study, we have demonstrated that infectious wild-type HIV-1 contains Brij 98 rafts but only minimal amounts of Triton X-100 rafts. To directly assess the functional requirement of virion-associated rafts and various features of cholesterol on HIV-1 replication, we replaced virion cholesterol with exogenous cholesterol analogues that have demonstrated either raft-promoting or -inhibiting capacity in model membranes. We observed that variable concentrations of exogenous analogues are required to replace a defined amount of virion-associated cholesterol, showing that structurally diverse cholesterol analogues have various affinities toward HIV-1. We found that replacement of 50% of virion cholesterol with these exogenous cholesterol analogues did not eliminate the presence of Brij 98 rafts in HIV-1. However, the infectivity levels of the lipid-modified HIV-1s directly correlate with the raft-promoting capacities of these cholesterol analogues. Our data provide the first direct assessment of virion-associated Brij 98 rafts in retroviral replication and illustrate the importance of the raft-promoting property of virion-associated cholesterol in HIV-1 replication.

Social and professional participation of individuals who are deaf : utilizing the psychosocial potential maximization framework

This article documents a strength-based understanding of how individuals who are deaf maximize their social and professional potential. This exploratory study was conducted with 49 adult participants who are deaf (n ¼ 30) and who have typical hearing (n ¼ 19) residing in America, Australia, England, and South Africa. The findings support a systematic and comprehensive framework of proactive psychosocial attributes and tactics. Statistical analysis showed no significant differences between the groups across four variables of psychosocial competencies. Qualitative data further suggests that participants who are deaf maximize their potential using two types of proactive psychosocial attributes and tactics: 1) skills that individuals with typical hearing use and 2) specialized skills for identifying, circumventing, or mastering deafness-related difficulties. These findings contribute to understandings of how individuals who are deaf can achieve social and professional success.

Racism as a determinant of health: a protocol for conducting a systematic review and meta-analysis

Background: