Discrete wavelet transform de-noising in eukaryotic gene splicing

This paper compares the most common digital signal processing methods of exon prediction in eukaryotes, and also proposes a technique for noise suppression in exon prediction. The specimen used here which has relevance in medical research, has been taken from the public genomic database - GenBank.Here exon prediction has been done using the digital signal processing methods viz. binary method, EIIP (electron-ion interaction psuedopotential) method and filter methods. Under filter method two filter designs, and two approaches using these two designs have been tried. The discrete wavelet transform has been used for de-noising of the exon plots.Results of exon prediction based on the methods mentioned above, which give values closest to the ones found in the NCBI database are given here. The exon plot de-noised using discrete wavelet transform is also given.Alterations to the proven methods as done by the authors, improves performance of exon prediction algorithms. Also it has been proven that the discrete wavelet transform is an effective tool for de-noising which can be used with exon prediction algorithms

Taxonomy, Bionomics and Biofouling of Bryozoans from the Coasts of India and the Antarctic Waters

The study of bryozoans, an important group of coelomates in the marine environment is an integral part of faunistic investigations. Bryozones are an ancient, aberrant phylum of microscopic but fascinating and often beautiful animals that build intricate colonies sometimes resembling minicolonies. In this study taxonomy, bionomics and biofouling of bryozoans from the coasts of India and the Antarctic waters. The marine biofouling is found to be hazardous. Bryozoans are microscopic , sessile,colonical coelomates that are permanently fastened in exoskeletal cases or gelatinous material of their own secretion.It is hoped that this work would help the future researchers to devote attention on microbenthos of the continental shelf of India when samples are made available through collections conducted by any ocean going vessel. In the present work an extensive study on the bryozoan foulers that occur at five selected sites of the cochin estury had to be examined and since the hydrographic parameters such as salinity, temperature, pH and dissolved oxygen in the estury,vary greatly from that in the open ocean, a frequent monitoring of these parameters was essential.

Design, Fabrication and Characterization of Passive and Active Polymer Photonic Devices

The rapid developments in fields such as fibre optic communication engineering and integrated optical electronics have expanded the interest and have increased the expectations about guided wave optics, in which optical waveguides and optical fibres play a central role. The technology of guided wave photonics now plays a role in generating information (guided-wave sensors) and processing information (spectral analysis, analog-to-digital conversion and other optical communication schemes) in addition to its original application of transmitting information (fibre optic communication). Passive and active polymer devices have generated much research interest recently because of the versatility of the fabrication techniques and the potential applications in two important areas – short distant communication network and special functionality optical devices such as amplifiers, switches and sensors. Polymer optical waveguides and fibres are often designed to have large cores with 10-1000 micrometer diameter to facilitate easy connection and splicing. Large diameter polymer optical fibres being less fragile and vastly easier to work with than glass fibres, are attractive in sensing applications. Sensors using commercial plastic optical fibres are based on ideas already used in silica glass sensors, but exploiting the flexible and cost effective nature of the plastic optical fibre for harsh environments and throw-away sensors. In the field of Photonics, considerable attention is centering on the use of polymer waveguides and fibres, as they have a great potential to create all-optical devices. By attaching organic dyes to the polymer system we can incorporate a variety of optical functions. Organic dye doped polymer waveguides and fibres are potential candidates for solid state gain media. High power and high gain optical amplification in organic dye-doped polymer waveguide amplifier is possible due to extremely large emission cross sections of dyes. Also, an extensive choice of organic dye dopants is possible resulting in amplification covering a wide range in the visible region.