Kuhan iridovirus

Summary: Pike-perch iridovirus

Episodes in carbohydrate chemistry : from β-linked mannosides to glycoconjugates

Carbohydrates are one of the most abundant classes of biomolecules on earth. In the initial stages of research on carbohydrates much effort was focused on investigation and determination of the structural aspects and complex nature of individual monosaccharides. Later on, development of protective group strategies and methods for oligosaccharide synthesis became the main topics of research. Today, the methodologies developed early on are being utilized in the production of carbohydrates for biological screening events. This multidisciplinary approach has generated the new discipline of glycobiology which focuses on research related to the appearance and biological significance of carbohydrates. In more detail, studies in glycobiology have revealed the essential roles of carbohydrates in cell-cell interactions, biological recognition events, protein folding, cell growth and tumor cell metastasis. As a result of these studies, carbohydrate derived diagnostic and therapeutic agents are likely to be of growing interest in the future. In this doctoral thesis, a journey through the fundamentals of carbohydrate synthesis is presented. The research conducted on this journey was neither limited to the study of any particular phenomena nor to the addressing of a single synthetic challenge. Instead, the focus was deliberately shifted from time to time in order to broaden the scope of the thesis, to continue the learning process and to explore new areas of carbohydrate research. Throughout the work, several previously reported synthetic protocols, especially procedures related to glycosylation reactions and protective group manipulations, were evaluated, modified and utilized or rejected. The synthetic molecules targeted within this thesis were either required for biological evaluations or utilized to study phenomena occuring in larger molecules. In addition, much effort was invested in the complete structural characterization of the synthesized compounds by a combination of NMR spectroscopic techniques and spectral simulations with the PERCH-software. This thesis provides the basics of working with carbohydrate chemistry. In more detail, synthetic strategies and experimental procedures for many different reactions and guidelines for the NMR-spectroscopic characterization of oligosaccharides and glycoconjugates are provided. Therefore, the thesis should prove valuable to researchers starting their own journeys in the ever expanding field of carbohydrate chemistry.

Tehokalastuksen vaikutukset Lappajärvessä : Kalastus elinkeinoksi Lappajärvellä -hankkeen vuosien 2001-2006 seurannan loppuraportti

Lappajärven, Etelä-Pohjanmaan suurimman järven, ekologinen tila on heikentynyt ja se luokitellaan nykyisin tyydyttäväksi. Rehevöityminen, 1990-luvun muikkukato ja yhteiskunnan rakennemuutos ovat vähentäneet kalastajien ja kalansaaliin määrää. Ammattikalastuksen edellytysten parantamiseksi toteutettiin vuosina 2001–2004 ”Kalastus elinkeinoksi Lappajärvellä” – hanke. Hankkeen vaikutuksia kalastoon ja järven ekosysteemiin seurattiin vuosina 2001–2006. Kokonaissaalis vuosina 2001–2004 oli 1655 tonnia (n. 29 kg/ha/vuosi). Vaikka saalistavoitetta (2100 tn) ei täysin saavutettu, oli hankkeella runsaasti myönteisiä, joskin osin vähäisiä tai epävarmoja vaikutuksia järven tilaan ja kalastoon. Kalastajien yksikkösaaliit etenkin kuhan ja isokokoisen ahvenen osalta nousivat hankkeen alussa. Loppuvuosina yksikkösaaliiden kehitys oli osittain ristiriitaista. Ulapan taloudellisesti vähempiarvoinen kalasto, varsinkin kuorekanta harveni selvästi. Muikku puolestaan lisääntyi ja pysyi runsaana. Kuhan ja isokokoisen ahvenen lisääntymistä selittivät pääosin lämpimät kesät ja kuhan onnistuneet istutukset. Petokalat, etenkin kuha, voivat osaltaan säädellä Lappajärven ulapan planktonsyöjäkalojen kantoja ja toisaalta estää särjen siirtymistä ulapalle. Tehokalastuksen loputtua alkoi näkyä merkkejä kalakantojen palautumisesta takaisin kohti lähtötilannetta. Rantavyöhykkeellä hankkeen vaikutukset jäivät selvästi vähäisemmiksi kuin ulapalla. Eläinplankton lisääntyi hieman ylemmissä vesikerroksissa, mutta tilanne alkoi palautua ennalleen hankkeen jälkeen. Sinileväkukinnot vaikuttivat vähentyneen hankkeen aikana, tosin kukintojen voimakas vaihtelu vaikeutti arviointia. Tehokalastus ja vesiensuojelun tehostuminen vähensivät fosforipitoisuuksia, tosin myös vähäsateiset vuodet vaikuttivat vähenemiseen. Pitoisuuksien lasku jatkui hankkeen jälkeen. Hanketta edeltänyt klorofyllipitoisuuksien kasvusuuntaus pysähtyi ja pitoisuustaso vakiintui. Tehokalastus pienensi klorofylli/fosfori-suhdetta ja vähensi sisäistä kuormitusta, mutta vaikutus alkoi heiketä hankkeen loputtua. Typpipitoisuuksiin, veden väriin tai näkösyvyyteen kalastus ei vaikuttanut. Tehokalastuksella voidaan parantaa Lappajärven tilaa, mutta kalastuksen on oltava jatkuvaa. Saalistavoitteeksi voisi riittää n. 20-30 kg/ha vuodessa, mutta samalla on jatkettava ulkoisen kuormituksen vähentämistä. Kalastuksen tulisi kohdistua arvokalojen lisäksi myös vähempiarvoisiin kalalajeihin ja samalla on tuettava petokalakantojen vahvistumista.

Persistent organic pollutants in sediments and fish from Lake Victoria, Uganda

This thesis describes the occurrence and sources of selected persistent organic pollutants (POPs) such as polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs), polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs) and hexachlorocyclohexanes (HCHs) in the northern watershed of Lake Victoria. Sediments and fish were collected from three highly polluted embayments (i.e. Murchison Bay, Napoleon Gulf and Thurston Bay) of the lake. The analysis for PCDD/Fs, PCBs and PBDEs was done using a high resolution mass spectrometer coupled to a gas chromatograph (GC), and a GC equipped with an electron capture detector was used for HCHs. Total (Σ) PCDD/Fs, PCBs and PBDEs in sediments ranged from 3.19 to 478, 313 to 4325 and 60.8 to 179 pg g-1 dry weight (dw), respectively. The highest concentrations of pollutants were found at sites close to industrial areas and wastewater discharge points. The maximum concentrations of PCDD/Fs, PCBs, PBDEs and HCHs in fish muscle homogenates were 49, 779, 495 and 45,900 pg g-1 wet weight (ww), respectively. The concentrations of the pollutants in Nile perch (Lates niloticus) were significantly greater than those in Nile tilapia (Oreochromis niloticus), possibly due to differences in trophic level and dietary feeding habits among fish species. World Health Organization-toxic equivalency quotient (WHO2005-TEQ) values in the sediments were up to 4.24 pg g-1 dw for PCDD/Fs and 0.55 pg TEQ g-1 dw for the 12 dioxin-like PCBs (dl-PCBs). 23.1% of the samples from the Napoleon Gulf were above the interim sediment quality guideline value of 0.85 pg WHO-TEQ g-1 dw set by the Canadian Council for Ministers of the Environment. The WHO2005-TEQs in fish were 0.001-0.16 pg g-1 for PCDD/Fs and 0.001-0.31 pg g-1 ww for dl- PCBs. The TEQ values were within a permissible level of 3.5 pg g−1 ww recommended by the European Commission. Based on the Commission set TEQs and minimum risk level criteria formulated by the Agency for Toxic Substances and Disease Registry, the consumption of fish from Lake Victoria gives no indication of health risks associated to PCDD/Fs and PCBs. Principal component analysis (PCA) indicated that anthropogenic activities such as agricultural straw open burning, medical waste incinerators and municipal solid waste combustors were the major sources of PCDD/Fs in the watershed of Lake Victoria. The ratios of α-/γ-HCH varied from 0.89 to 1.68 suggesting that the highest HCH residues mainly came from earlier usage and fresh γ-HCH (lindane). In the present study, the concentration of POPs in fish were not significantly related to those in sediments, and the biota sediment accumulation factor (BSAF) concept was found to be a poor predictor of the bioavailability and bioaccumulation of environmental pollutants.

Spatial and temporal variation in fish populations and assemblages in coastal waters of the northern Baltic Proper

The distribution and traits of fish are of interest both ecologically and socio-economically. In this thesis, phenotypic and structural variation in fish populations and assemblages was studied on multiple spatial and temporal scales in shallow coastal areas in the archipelago of the northern Baltic Proper. In Lumparn basin in Åland Islands, the fish assemblage displayed significant seasonal variation in depth zone distribution. The results indicate that investigating both spatial and temporal variation in small scale is crucial for understanding patterns in fish distribution and community structure in large scale. The local population of Eurasian perch Perca fluviatilis L displayed habitat-specific morphological and dietary variation. Perch in the pelagic zone were on average deeper in their body shape than the littoral ones and fed on fish and benthic invertebrates. The results differ from previous studies conducted in freshwater habitats, where the pelagic perch typically are streamlined in body shape and zooplanktivorous. Stable isotopes of carbon and nitrogen differed between perch with different stomach contents, suggesting differentiation of individual diet preferences. In the study areas Lumparn and Ivarskärsfjärden in Åland Islands and Galtfjärden in Swedish east coast, the development in fish assemblages during the 2000’s indicated a general shift towards higher abundances of small-bodied lower-order consumers, especially cyprinids. For European pikeperch Sander lucioperca L., recent declines in adult fish abundances and high mortalities (Z = 1.06–1.16) were observed, which suggests unsustainably high fishing pressure on pikeperch. Based on the results it can be hypothesized that fishing has reduced the abundances of large predatory fish, which together with bottom-up forcing by eutrophication has allowed the lower-order consumer species to increase in abundances. This thesis contributes to the scientific understanding of aquatic ecosystems with new descriptions on morphological and dietary adaptations in perch in brackish water, and on the seasonal variation in small-scale spatial fish distribution. The results also demonstrate anthropogenic effects on coastal fish communities and underline the urgency of further reducing nutrient inputs and regulating fisheries in the Baltic Sea region.

Effects of algal turbidity on foraging and antipredator behaviour of the three-spined stickleback (Gasterosteus aculeatus)

The aim of this thesis was to examine how aquatic organisms, such as fish, behave in an altered environmental condition. Many species of fish use vision as their primary tool to gain information about their surrounding environment. The visual conditions of aquatic habitats are often altered as a result of anthropogenic disturbance, such as eutrophication that initiates algal turbidity. In general, turbidity reduces the visibility and can be hypothesized to have an influence on the behaviour of fish. I used the three-spined stickleback (Gasterosteus aculeatus) as a model species and conducted four studies in the laboratory to test how algal turbidity affects its behaviour. In this thesis, two major behavioural aspects are discussed. The first is antipredator behaviour. In study I, the combined effects of turbidity and shoot density on habitat choice (shelter vs open) behaviour was tested on a group of sticklebacks (20 fish) in the presence and absence of piscivorous perch (Perca fluviatilis). In study II, I examined the behavioural responses of feeding sticklebacks when they were exposed to the sudden appearance of an avian predator (the silhouette of a common tern, Sterna hirundo). The study was done in turbid and clear water using three different groups sizes (1, 3 and 6 fish). The second aspect is foraging behaviour. Study III & IV focused on the effects of algal turbidity on the foraging performance of sticklebacks. In study III, I conducted two separate experiments to examine the effects of turbidity on prey consumption and prey choice of sticklebacks. In this experiment turbidity levels and the proportion of large and small prey (Daphnia spp.) were manipulated. In study IV, I studied whether a group of six sticklebacks can distribute themselves according to food input at two feeding stations in a way that provided each fish with the same amount of food in clear and turbid water. I also observed whether the fish can follow changes in resource distribution between the foraging patches. My results indicate an overall influence of algal turbidity on the antipredator and foraging behaviour of sticklebacks. In the presence of a potential predator, the use of the sheltered habitat was more pronounced at higher turbidity. Besides this, sticklebacks reduced their activity levels with predator presence at higher turbidity and shoot density levels, suggesting a possible antipredator adaptation to avoid a predator. When exposed to a sudden appearance of an avian predator, sticklebacks showed a weaker antipredator response in turbid water, which suggests that turbidity degrades the risk assessment capabilities of sticklebacks. I found an effect of group size but not turbidity in the proportion of sticklebacks that fled to the shelter area, which indicates that sticklebacks are able to communicate among group members at the experimental turbidity levels. I found an overall negative effect of turbidity on food intake. Both turbidity and changes in the proportion of prey sizes played a significant role in a stickleback’s prey selection. At lower turbidity levels (clear <1 and 5 NTU) sticklebacks showed preferences for large prey, whereas in more turbid conditions and when the proportion of large to small prey increased sticklebacks became increasingly random in their prey selection. Finally, my results showed that groups of sticklebacks disperse themselves between feeding stations according to the reward ratios following the predictions of the ideal free distribution theory. However, they took a significantly longer time to reach the equilibrium distribution in turbid water than in clear water. In addition, they showed a slower response to changes in resource distribution in a turbid environment. These findings suggest that turbidity interferes with the information transfer among group foragers. It is important to understand that aquatic animals are often exposed to a degraded environment. The findings of this thesis suggest that algal turbidity negatively affects their behavioural performance. The results also shed light on the underlying behavioural strategies of sticklebacks in turbid conditions that might help them adapt to an altered environmental situation and increase their survival. In conclusion, I hold that although algal turbidity has detrimental effects on the antipredator and foraging behaviour of sticklebacks, their behavioural adjustment might help them adapt to a changing environment.

Lo sviluppo della radiofonia privata locale in Italia - un paragone alla situazione finlandese

Il monopolio statale si rompe in Italia già nel 1976 e le piccole antenne private sono nate come funghi. Talvolta gli studiosi hanno ipotizzato che questo settore radiofonico fiorisca e sia in continua crescita in Italia, comparato particolarmente alla situazione finlandese. Tra i radioascoltatori internazionali l'Italia è considerata il paradiso delle antenne locali per la gran quantità degli impianti radiofonici in ambito locale. Si ipotizza anche che la gran quantità delle stazioni di radio garantisca automaticamente l'obiettività dell'informazione, o almeno la polifonia della radio. Invece in Finlandia lo Stato ha limitato il diritto di impiantare una stazione radio e il numero delle stazioni in rete con una legge abbastanza rigida a livello europeo per controllare la privatizzazione del settore e la diffusione della nuova ideologia di radiofonia libera. Con la mia ricerca vorrei affermare la correttezza di tali ipotesi e, allo stesso tempo, verificare se l'Italia sia tuttora un paradiso di radiofonia locale. Uno degli scopi di questa ricerca è far capire che la formazione e la struttura del campo radiofonico dipende spesso della società intorno a sé. Dal momento che l'analisi si basa parzialmente sui metodi quantitativi, diamo un'occhiata ai numeri delle stazioni statali, reti nazionali e seminazionali e radio locali e provinciali nella provincia di Parma e in Finlandia Propria. Inoltre in questa tesi di laurea vorrei ricercare quali potrebbero essere i motivi storici, legislativi, culturali ed economici che hanno influito sul precoce sviluppo italiano nel campo della radiofonia locale. Per dare una più ampia visione della situazione italiana, ho fatto delle osservazioni sulla struttura del campo radiofonico in questi due paesi, sulle differenze essenziali tra Finlandia e Italia e sui motivi che influiscono nella nascita della radiofonia privata in ambito locale paragonando i fatti italiani con quelli finlandesi. Questa ricerca può dare un contributo importante agli appassionati del radioascolto ed essere utile come inizio di una più vasta valutazione di radiofonia locale per coloro che sono interessati ai mass media come mezzi di comunicazione, di potere e di democrazia. Contrariamente agli articoli anteriori e alle ricerche fatte, ormai la radiofonia provinciale non ha più molta importanza in Italia. Possiamo dire che non ci sia più un modello italiano da ammirare, perché le reti nazionali dominano le frequenze e raccolgono ormai un pubblico di dimensioni ragguardevoli e in continua crescita. Anche se il numero delle emittenti locali è diminuito notevolmente nella provincia di Parma, non possiamo concludere che la radiofonia locale in Italia sia morta basandosi su una sola ricerca che riguarda il cambiamento della struttura radiofonica in una località italiana.

Lo sviluppo della radiofonia privata locale in Italia - un paragone alla situazione finlandese

Il monopolio statale si rompe in Italia già nel 1976 e le piccole antenne private sono nate come funghi. Talvolta gli studiosi hanno ipotizzato che questo settore radiofonico fiorisca e sia in continua crescita in Italia, comparato particolarmente alla situazione finlandese. Tra i radioascoltatori internazionali l'Italia è considerata il paradiso delle antenne locali per la gran quantità degli impianti radiofonici in ambito locale. Si ipotizza anche che la gran quantità delle stazioni di radio garantisca automaticamente l'obiettività dell'informazione, o almeno la polifonia della radio. Invece in Finlandia lo Stato ha limitato il diritto di impiantare una stazione radio e il numero delle stazioni in rete con una legge abbastanza rigida a livello europeo per controllare la privatizzazione del settore e la diffusione della nuova ideologia di radiofonia libera. Con la mia ricerca vorrei affermare la correttezza di tali ipotesi e, allo stesso tempo, verificare se l'Italia sia tuttora un paradiso di radiofonia locale. Uno degli scopi di questa ricerca è far capire che la formazione e la struttura del campo radiofonico dipende spesso della società intorno a sé. Dal momento che l'analisi si basa parzialmente sui metodi quantitativi, diamo un'occhiata ai numeri delle stazioni statali, reti nazionali e seminazionali e radio locali e provinciali nella provincia di Parma e in Finlandia Propria. Inoltre in questa tesi di laurea vorrei ricercare quali potrebbero essere i motivi storici, legislativi, culturali ed economici che hanno influito sul precoce sviluppo italiano nel campo della radiofonia locale. Per dare una più ampia visione della situazione italiana, ho fatto delle osservazioni sulla struttura del campo radiofonico in questi due paesi, sulle differenze essenziali tra Finlandia e Italia e sui motivi che influiscono nella nascita della radiofonia privata in ambito locale paragonando i fatti italiani con quelli finlandesi. Questa ricerca può dare un contributo importante agli appassionati del radioascolto ed essere utile come inizio di una più vasta valutazione di radiofonia locale per coloro che sono interessati ai mass media come mezzi di comunicazione, di potere e di democrazia. Contrariamente agli articoli anteriori e alle ricerche fatte, ormai la radiofonia provinciale non ha più molta importanza in Italia. Possiamo dire che non ci sia più un modello italiano da ammirare, perché le reti nazionali dominano le frequenze e raccolgono ormai un pubblico di dimensioni ragguardevoli e in continua crescita. Anche se il numero delle emittenti locali è diminuito notevolmente nella provincia di Parma, non possiamo concludere che la radiofonia locale in Italia sia morta basandosi su una sola ricerca che riguarda il cambiamento della struttura radiofonica in una località italiana.