Vitamin D deficiency and a CYP27B1-1260 promoter polymorphism are associated with chronic hepatitis C and poor response to interferon-alfa based therapy

BACKGROUND: Vitamin D is an important immune modulator and preliminary data indicated an association between vitamin D deficiency and sustained virologic response (SVR) rates in patients with chronic hepatitis C. We therefore performed a comprehensive analysis on the impact of vitamin D serum levels and of genetic polymorphisms within the vitamin D cascade on chronic hepatitis C and its treatment. METHODS: Vitamin D serum levels, genetic polymorphisms within the vitamin D receptor and the 1α- hydroxylase were determined in a cohort of 468 HCV genotype 1, 2 and 3 infected patients who were treated with interferon-alfa based regimens. RESULTS: Chronic hepatitis C was associated with a high incidence of severe vitamin D deficiency compared to controls (25(OH)D3<10 ng/mL in 25% versus 12%, p<0.00001), which was in part reversible after HCV eradication. 25(OH)D3 deficiency correlated with SVR in HCV genotype 2 and 3 patients (63% and 83% SVR for patients with and without severe vitamin D deficiency, respectively, p<0.001). In addition, the CYPB27-1260 promoter polymorphism rs10877012 had substantial impact on 1-25- dihydroxyvitamin D serum levels and SVR rates in HCV genotype 1, 2 and 3 infected patients. CONCLUSIONS: Chronic hepatitis C virus infection is associated with vitamin D deficiency. Reduced 25- hydroxyvitamin D levels and CYPB27-1260 promoter polymorphism are associated with failure to achieve SVR in HCV genotype 1, 2, 3 infected patients.

Oral insecticidal activity of root colonizing Pseudomonas fluorescens CHA0: a biocontrol agent with potential to control plant pests and diseases

The application of microbial biocontrol agents for the control of fungal plant diseases and plant insect pests is a promising approach in the development of environmentally benign pest management strategies. The ideal biocontrol organism would be a bacterium or a fungus with activity against both, insect pests and fungal pathogens. Here we demonstrate the oral insecticidal activity of the root colonizing Pseudomonas fluorescens CHA0, which is so far known for its capacity to efficiently suppress fungal plant pathogens. Feeding assays with CHA0-sprayed leaves showed that this strain displays oral insecticidal activity and is able to efficiently kill larvae of three important insect pests. We further show data indicating that the Fit insect toxin produced by CHA0 and also metabolites controlled by the global regulator GacA contribute to oral insect toxicity.

Variable viral clearance despite adequate ganciclovir plasma levels during valganciclovir treatment for cytomegalovirus disease in D+/R- transplant recipients.

ABSTRACT: BACKGROUND: Valganciclovir, the oral prodrug of ganciclovir, has been demonstrated equivalent to iv ganciclovir for CMV disease treatment in solid organ transplant recipients. Variability in ganciclovir exposure achieved with valganciclovir could be implicated as a contributing factor for explaining variations in the therapeutic response. This prospective observational study aimed to correlate clinical and cytomegalovirus (CMV) viral load response (DNAemia) with ganciclovir plasma concentrations in patients treated with valganciclovir for CMV infection/disease. METHODS: Seven CMV D+/R- transplant recipients (4 kidney, 2 liver and 1 heart) were treated with valganciclovir (initial dose was 900-1800 mg/day for 3-6.5 weeks, followed by 450-900 mg/day for 2-9 weeks). DNAemia was monitored by real time quantitative PCR and ganciclovir plasma concentration was measured at trough (Ctrough) and 3 h after drug administration (C3h) by HPLC. RESULTS: Four patients presented with CMV syndrome, two had CMV tissue-invasive disease after prophylaxis discontinuation, and one liver recipient was treated pre-emptively for asymptomatic rising CMV viral load 5 weeks post-transplantation in the absence of prophylaxis. CMV DNAemia decreased during the first week of treatment in all recipients except in one patient (median decrease: -1.2 log copies/mL, range: -1.8 to 0) despite satisfactory ganciclovir exposure (AUC0-12 = 48 mg.h/L, range for the 7 patients: 40-118 mg.h/L). Viral clearance was obtained in five patients after a median of time of 34 days (range: 28-82 days). Two patients had recurrent CMV disease despite adequate ganciclovir exposure (65 mg.h/L, range: 44-118 mg.h/L). CONCLUSIONS: Valganciclovir treatment for CMV infection/disease in D+/R- transplant recipients can thus result in variable viral clearance despite adequate ganciclovir plasma concentrations, probably correlating inversely with anti-CMV immune responses after primary infection.

Un projet de recherche : identifier les compétences développées par les policiers exposés à la violence et aux incivilités

Les problèmes de santé mentale (détresse psychique, dépression, burn-out, etc.) sont une préoccupation grandissante dans les sociétés occidentales. Ils se caractérisent par de gros risques de rechutes et de chronicisation (Lopez, Mathers, Ezzati, Jamison, Murray, 2006; The WHO World Mental Health Survey Consortium, 2004), ainsi que par des conséquences dramatiques pour les personnes qui en sont les victimes. Pour les organisations - et la police n'échappe pas à ce phénomène - ces problèmes constituent un défi majeur puisqu'ils sont associés à des épisodes d'absences prolongées et à une diminution importante de l'efficacité au travail. [Auteur]

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

We report the generation and analysis of functional data from multiple, diverse experiments performed on a targeted 1% of the human genome as part of the pilot phase of the ENCODE Project. These data have been further integrated and augmented by a number of evolutionary and computational analyses. Together, our results advance the collective knowledge about human genome function in several major areas. First, our studies provide convincing evidence that the genome is pervasively transcribed, such that the majority of its bases can be found in primary transcripts, including non-protein-coding transcripts, and those that extensively overlap one another. Second, systematic examination of transcriptional regulation has yielded new understanding about transcription start sites, including their relationship to specific regulatory sequences and features of chromatin accessibility and histone modification. Third, a more sophisticated view of chromatin structure has emerged, including its inter-relationship with DNA replication and transcriptional regulation. Finally, integration of these new sources of information, in particular with respect to mammalian evolution based on inter- and intra-species sequence comparisons, has yielded new mechanistic and evolutionary insights concerning the functional landscape of the human genome. Together, these studies are defining a path for pursuit of a more comprehensive characterization of human genome function.

The Future of the Deuteronomistic History

The present debate on the so-called "Deuteronomistic History" has become quite confusing and in recent years more and more scholars are inclined to deny the existence of a Deuteronomistic History as elaborated by Martin Noth or at least to modify this thesis radically. The contributions in this volume reflect the present state of discussion about the Deuteronomistic History. With one exception they have all been presented and discussed in three special sessions dedicated to "Deuteronomism" during the SBL International Meeting in Lausanne (July 1997). Three topics were treated: "The Future of the Deuteronomistic History", "Identity and Literary Strategies of the Deuteronomists", "Deuteronomism and the Hebrew Bible". The contributors are: R. Albertz, A.G. Auld, M. Bauks, W. Dietrich, D. Edelman, F. Garcia Lopez, E.A. Knauf, G. Knoppers, S.K. McKenzie, C. Nihan, T.C. Römer, N.H. Rösel, J. Van Seters and J. Vermeylen. Each contribution offers a valuable entry into one of the most important discussions of Old Testament scholarship at the end of the twentieth century.

The InterPro database, an integrated documentation resource for protein families, domains and functional sites.

Signature databases are vital tools for identifying distant relationships in novel sequences and hence for inferring protein function. InterPro is an integrated documentation resource for protein families, domains and functional sites, which amalgamates the efforts of the PROSITE, PRINTS, Pfam and ProDom database projects. Each InterPro entry includes a functional description, annotation, literature references and links back to the relevant member database(s). Release 2.0 of InterPro (October 2000) contains over 3000 entries, representing families, domains, repeats and sites of post-translational modification encoded by a total of 6804 different regular expressions, profiles, fingerprints and Hidden Markov Models. Each InterPro entry lists all the matches against SWISS-PROT and TrEMBL (more than 1,000,000 hits from 462,500 proteins in SWISS-PROT and TrEMBL). The database is accessible for text- and sequence-based searches at http://www.ebi.ac.uk/interpro/. Questions can be emailed to interhelp@ebi.ac.uk.

Le(s) récit(s) dit de l'instauration de la monarchie en 1 Samuel

(Résumé de l'ouvrage) The present debate on the so-called "Deuteronomistic History" has become quite confusing and in recent years more and more scholars are inclined to deny the existence of a Deuteronomistic History as elaborated by Martin Noth or at least to modify this thesis radically. The contributions in this volume reflect the present state of discussion about the Deuteronomistic History. With one exception they have all been presented and discussed in three special sessions dedicated to "Deuteronomism" during the SBL International Meeting in Lausanne (July 1997). Three topics were treated: "The Future of the Deuteronomistic History", "Identity and Literary Strategies of the Deuteronomists", "Deuteronomism and the Hebrew Bible". The contributors are: R. Albertz, A.G. Auld, M. Bauks, W. Dietrich, D. Edelman, F. Garcia Lopez, E.A. Knauf, G. Knoppers, S.K. McKenzie, C. Nihan, T.C. Römer, N.H. Rösel, J. Van Seters and J. Vermeylen. Each contribution offers a valuable entry into one of the most important discussions of Old Testament scholarship at the end of the twentieth century.