Vaniprevir with pegylated interferon alpha-2a and ribavirin in treatment-naïve patients with chronic hepatitis C: a randomized phase II study.

Vaniprevir (MK-7009) is a macrocyclic hepatitis C virus (HCV) nonstructural protein 3/4A protease inhibitor. The aim of the present phase II study was to examine virologic response rates with vaniprevir in combination with pegylated interferon alpha-2a (Peg-IFN-α-2a) plus ribavirin (RBV). In this double-blind, placebo-controlled, dose-ranging study, treatment-naïve patients with HCV genotype 1 infection (n = 94) were randomized to receive open-label Peg-IFN-α-2a (180 μg/week) and RBV (1,000-1,200 mg/day) in combination with blinded placebo or vaniprevir (300 mg twice-daily [BID], 600 mg BID, 600 mg once-daily [QD], or 800 mg QD) for 28 days, then open-label Peg-IFN-α-2a and RBV for an additional 44 weeks. The primary efficacy endpoint was rapid viral response (RVR), defined as undetectable plasma HCV RNA at week 4. Across all doses, vaniprevir was associated with a rapid two-phase decline in viral load, with HCV RNA levels approximately 3 log(10) IU/mL lower in vaniprevir-treated patients, compared to placebo recipients. Rates of RVR were significantly higher in each of the vaniprevir dose groups, compared to the control regimen (68.8%-83.3% versus 5.6%; P < 0.001 for all comparisons). There were numerically higher, but not statistically significant, early and sustained virologic response rates with vaniprevir, as compared to placebo. Resistance profile was predictable, with variants at R155 and D168 detected in a small number of patients. No relationship between interleukin-28B genotype and treatment outcomes was demonstrated in this study. The incidence of adverse events was generally comparable between vaniprevir and placebo recipients; however, vomiting appeared to be more common at higher vaniprevir doses. CONCLUSION: Vaniprevir is a potent HCV protease inhibitor with a predictable resistance profile and favorable safety profile that is suitable for QD or BID administration.

vHOG, a multispecies vertebrate ontology of homologous organs groups.

MOTIVATION: Most anatomical ontologies are species-specific, whereas a framework for comparative studies is needed. We describe the vertebrate Homologous Organs Groups ontology, vHOG, used to compare expression patterns between species.¦RESULTS: vHOG is a multispecies anatomical ontology for the vertebrate lineage. It is based on the HOGs used in the Bgee database of gene expression evolution. vHOG version 1.4 includes 1184 terms, follows OBO principles and is based on the Common Anatomy Reference Ontology (CARO). vHOG only describes structures with historical homology relations between model vertebrate species. The mapping to species-specific anatomical ontologies is provided as a separate file, so that no homology hypothesis is stated within the ontology itself. Each mapping has been manually reviewed, and we provide support codes and references when available. Availability and implementation: vHOG is available from the Bgee download site (http://bgee.unil.ch/), as well as from the OBO Foundry and the NCBO Bioportal websites.¦CONTACT: bgee@isb-sib.ch; frederic.bastian@unil.ch.

Post-detection analysis for grating-based ultra-small angle X-ray scattering.

Until recently, the hard X-ray, phase-sensitive imaging technique called grating interferometry was thought to provide information only in real space. However, by utilizing an alternative approach to data analysis we demonstrated that the angular resolved ultra-small angle X-ray scattering distribution can be retrieved from experimental data. Thus, reciprocal space information is accessible by grating interferometry in addition to real space. Naturally, the quality of the retrieved data strongly depends on the performance of the employed analysis procedure, which involves deconvolution of periodic and noisy data in this context. The aim of this article is to compare several deconvolution algorithms to retrieve the ultra-small angle X-ray scattering distribution in grating interferometry. We quantitatively compare the performance of three deconvolution procedures (i.e., Wiener, iterative Wiener and Lucy-Richardson) in case of realistically modeled, noisy and periodic input data. The simulations showed that the algorithm of Lucy-Richardson is the more reliable and more efficient as a function of the characteristics of the signals in the given context. The availability of a reliable data analysis procedure is essential for future developments in grating interferometry.

The G0/G1 switch gene 2 is a novel PPAR target gene.

PPARs (peroxisome-proliferator-activated receptors) alpha, beta/delta and gamma are a group of transcription factors that are involved in numerous processes, including lipid metabolism and adipogenesis. By comparing liver mRNAs of wild-type and PPARalpha-null mice using microarrays, a novel putative target gene of PPARalpha, G0S2 (G0/G1 switch gene 2), was identified. Hepatic expression of G0S2 was up-regulated by fasting and by the PPARalpha agonist Wy14643 in a PPARalpha-dependent manner. Surprisingly, the G0S2 mRNA level was highest in brown and white adipose tissue and was greatly up-regulated during mouse 3T3-L1 and human SGBS (Simpson-Golabi-Behmel syndrome) adipogenesis. Transactivation, gel shift and chromatin immunoprecipitation assays indicated that G0S2 is a direct PPARgamma and probable PPARalpha target gene with a functional PPRE (PPAR-responsive element) in its promoter. Up-regulation of G0S2 mRNA seemed to be specific for adipogenesis, and was not observed during osteogenesis or myogenesis. In 3T3-L1 fibroblasts, expression of G0S2 was associated with growth arrest, which is required for 3T3-L1 adipogenesis. Together, these data indicate that G0S2 is a novel target gene of PPARs that may be involved in adipocyte differentiation.

Testi volgari della seconda metà del sec. XIV attorno ai Visconti

Oggetto della tesi è la poesia volgare prodotta nell'orbita della corte viscontea nel corso del Trecento e del primo Quattrocento. La presente ricerca si propone di illustrare il contesto culturale lombardo e correggere alcuni giudizi di colore avanzati dagli studi positivistici di fine Ottocento e inizio Novecento, attraverso un'indagine rigorosa sui testi scritti attorno ai Visconti, dei quali si propone un'edizione filologicamente sorvegliata, accompagnata da uno studio sulla tradizione manoscritta, da cappelli introduttivi, apparati critici e note di commento. Una prima sezione ospita il corpus di rime dell'aretino Braccio Bracci: tre canzoni {Silenzio posto aveva al dire in rima-, O aspettato dalla giusta verga e lo scambio epistolare fittizio Soldan di Bambilonia et ceterà-Illustri e serenissimo, alto e vero) e quindici sonetti (O tesorier, che 7 bel tesor d'Omero-, Antonio mio, tua fama era inmortale; Deh, non guastare il popol cristiano; O santo Pietro, per Dio, non restare; El tempio tuo, che tu edificasti-, Veggio l'antica, dritta e ferma Scala-, Messer Luigi, vostra nobil fama-, Volse Traian, quando la vedovella-, Firenze, or ti rallegra, or ti conforta-, O infamato da ' lucenti raggi-, Sette sorelle sono a mme venute-, Sempre son stato con gran signoria; Se Ile cose terrene al possesore; Sia con voi pace, signor' fiorentini). La seconda sezione accoglie dodici sonetti attribuiti al fiorentino Marchionne di Matteo Arrighi {Deh, quant 'egli è in villa un bello stare; Omé, e ' mi par che Ila mia rota torca; Acciò che veggi chiaro il mio sonetto; Tu non potrai più bere alle stagioni; O Iscatizza di vii condizione; Se mille volte il dì tu m'uccidessi; Io n'ò 'n dispetto il Sole e Ila Luna; Tanto mi piace l'angelico sono; Lasso, tapino a mme, quando riguardo; Era venuta nella mente mia; Io ti ricordo, caro amico fino; Solo soletto ma non di pensieri). Nella terza sezione si propongono due canzoni viscontee del magister Giovanni da Modena, La mia gravosa e disformata vita e Ne l'ora che la caligin nocturna . La quarta e ultima sezione è dedicata ad alcune poesie anonime viscontee: sei sonetti (Egli è gran tempo, dolce Signor mio; Quela dolce saeta che nel core; Stan le cita lombarde co le chiave; Cesere in arme fu feroce e franco; l'pensava stancar la destra mano; Poniam silenzio a tutti i gran Signori), due ballate (Chi troppo al fuoco si lassa apressare e Io udii già cantare), due Lamenti di Bernabò Visconti in ottava rima (Novo lamento con doglioxo pianto e l'prego Idio eh 'è Signore e Padre, quest'ultimo pronunciato da un tal Matteo da Milano) e una canzone in morte del duca Gian Galeazzo {Fortuna c 'ogni ben mundan remuti).