Maintenance of polymorphism : a theoretical approach using multilocus systems

Résumé La thématique de cette thèse peut être résumée par le célèbre paradoxe de biologie évolutive sur le maintien du polymorphisme face à la sélection et par l'équation du changement de fréquence gamétique au cours du temps dû, à la sélection. La fréquence d'un gamète xi à la génération (t + 1) est: !!!Equation tronquée!!! Cette équation est utilisée pour générer des données utlisée tout au long de ce travail pour 2, 3 et 4 locus dialléliques. Le potentiel de l'avantage de l'hétérozygote pour le maintien du polymorphisme est le sujet de la première partie. La définition commune de l'avantage de l'hétérozygote n'etant applicable qu'a un locus ayant 2 allèles, cet avantage est redéfini pour un système multilocus sur les bases de précédentes études. En utilisant 5 définitions différentes de l'avantage de l'hétérozygote, je montre que cet avantage ne peut être un mécanisme général dans le maintien du polymorphisme sous sélection. L'étude de l'influence de locus non-détectés sur les processus évolutifs, seconde partie de cette thèse, est motivée par les travaux moléculaires ayant pour but de découvrir le nombre de locus codant pour un trait. La plupart de ces études sous-estiment le nombre de locus. Je montre que des locus non-détectés augmentent la probabilité d'observer du polymorphisme sous sélection. De plus, les conclusions sur les facteurs de maintien du polymorphisme peuvent être trompeuses si tous les locus ne sont pas détectés. Dans la troisième partie, je m'intéresse à la valeur attendue de variance additive après un goulot d'étranglement pour des traits sélectionés. Une études précédente montre que le niveau de variance additive après goulot d'étranglement augmente avec le nombre de loci. Je montre que le niveau de variance additive après un goulot d'étranglement augmente (comparé à des traits neutres), mais indépendamment du nombre de loci. Par contre, le taux de recombinaison a une forte influence, entre autre en regénérant les gamètes disparus suite au goulot d'étranglement. La dernière partie de ce travail de thèse décrit un programme pour le logiciel de statistique R. Ce programme permet d'itérer l'équation ci-dessus en variant les paramètres de sélection, recombinaison et de taille de populations pour 2, 3 et 4 locus dialléliques. Cette thèse montre qu'utiliser un système multilocus permet d'obtenir des résultats non-conformes à ceux issus de systèmes rnonolocus (la référence en génétique des populations). Ce programme ouvre donc d'intéressantes perspectives en génétique des populations. Abstract The subject of this PhD thesis can be summarized by one famous paradox of evolu-tionary biology: the maintenance of polymorphism in the face of selection, and one classical equation of theoretical population genetics: the changes in gametic frequencies due to selection and recombination. The frequency of gamete xi at generation (t + 1) is given by: !!! Truncated equation!!! This equation is used to generate data on selection at two, three, and four diallelic loci for the different parts of this work. The first part focuses on the potential of heterozygote advantage to maintain genetic polymorphism. Results of previous studies are used to (re)define heterozygote advantage for multilocus systems, since the classical definition is for one diallelic locus. I use 5 different definitions of heterozygote advantage. And for these five definitions, I show that heterozygote advantage is not a general mechanism for the maintenance of polymorphism. The study of the influence of undetected loci on evolutionary processes (second part of this work) is motivated by molecular works which aim at discovering the loci coding for a trait. For most of these works, some coding loci remains undetected. I show that undetected loci increases the probability of maintaining polymorphism under selection. In addition, conclusions about the factor that maintain polymorphism can be misleading if not all loci are considered. This is, therefore, only when all loci are detected that exact conclusions on the level of maintained polymorphism or on the factor(s) that maintain(s) polymorphism could be drawn. In the third part, the focus is on the expected release of additive genetic variance after bottleneck for selected traits. A previous study shows that the expected release of additive variance increases with an increase in the number of loci. I show that the expected release of additive variance after bottleneck increases for selected traits (compared with neutral), but this increase is not a function of the number of loci, but function of the recombination rate. Finally, the last part of this PhD thesis is a description of a package for the statistical software R that implements the Equation given above. It allows to generate data for different scenario regarding selection, recombination, and population size. This package opens perspectives for the theoretical population genetics that mainly focuses on one locus, while this work shows that increasing the number of loci leads not necessarily to straightforward results.

Geodynamic reconstructions of the Australides-2: Mesozoic-Cainozoic

The present work, derived from a full global geodynamic reconstruction model over 600 Ma and based on a large database, focuses herein on the interaction between the Pacific, Australian and Antarctic plates since 200 Ma, and proposes integrated solutions for a coherent, physically consistent scenario. The evolution of the Australia-Antarctica-West Pacific plate system is dependent on the Gondwana fit chosen for the reconstruction. Our fit, as defined for the latest Triassic, implies an original scenario for the evolution of the region, in particular for the "early" opening history of the Tasman Sea. The interaction with the Pacific, moreover, is characterised by many magmatic arc migrations and ocean openings, which are stopped by arc-arc collision, arc-spreading axis collision, or arc-oceanic plateau collision, and subduction reversals. Mid-Pacific oceanic plateaus created in the model are much wider than they are on present-day maps, and although they were subducted to a large extent, they were able to stop subduction. We also suggest that adduction processes (i.e., re-emergence of subducted material) may have played an important role, in particular along the plate limit now represented by the Alpine Fault in New Zealand.

Symptoms of chronic stress at work in NGO workers

Working in a NGO often involves providing life saving resources (food, medicine, equipment, water, etc) to needy populations around the globe. Such duty requires highly dedicated employees and humanitarian workers are said to face a hign degree of pressure in their daily work. Despite the evidence of taxing work demands, and a high potential for stress related problems, very few studies on occupational chronic stress have specifically looked at NGO workers. Assuming that "field stress" can relay to workers at headquarters, we carried out an exploratory study about occupational health among employees of a NGO's headquarters. We sent a questionnaire to all employees (N=130) of a NGO headquarters located in Switzerland. We used the TST questionnaire (French version of the Langner's questionnaire on psychiatric symptoms) to identify cases with potential mental health problems. We also included in the questionnaire some items about motivation, acknowledgment, work-life balance, job demand, and autonomy. A total of 75 employees answered our questionnaire (57% response rate). 44% of our sample were men (n=33) and 56% were women (n=42). The mean age was of 40 years (SD=7.6). 56% were working at the headquarters of the NGO in questions as of 2 years or less. Not surprisingly, a majority of respondents reported to be highly motivated (74%) and the meaning of work was important for 80% of them. However, 35% indicated having problems in conciliating their private and professional life. Most frequent reported symptoms included feeling "weak all over" (81%), having "trouble getting asleep often" (35%), "clogging in nose" (35%), feeling "nervous often" (33%), and "memory not all right" (33%). The score for psychiatric symptoms was high in 8 (11%) employees whose health might therefore be at risk. In comparison, other sudies showed that this proportion was 9% for French teachers and 16% for sales personnel1. Results show that symptoms of mental health problems do occur among NGO workers. Some of these symptoms are known to be linked to occupational stress. Chronic stress manifests itself first in non-specific symptoms (e.g. fatigue) and later in specific pathologies. This could explain the relatively low proportion of cases with a high score in Langner's scale than was expected. Therefore, we hypothesize a healthy worker effect. The fact that our sample is 40 years old in average, and that the turnover is quite high can also support this hypothesis. Further research is needed in order to better understand occupational stress in this specific population. An upcoming study will investigate the role of organizational factors associated with health complaints. Therefore, a longitudinal survey including quantitative and qualitative methods is appropriate.

Towards a diffusion image processing validation and accuracy prediction framework

Validation is the main bottleneck preventing theadoption of many medical image processing algorithms inthe clinical practice. In the classical approach,a-posteriori analysis is performed based on someobjective metrics. In this work, a different approachbased on Petri Nets (PN) is proposed. The basic ideaconsists in predicting the accuracy that will result froma given processing based on the characterization of thesources of inaccuracy of the system. Here we propose aproof of concept in the scenario of a diffusion imaginganalysis pipeline. A PN is built after the detection ofthe possible sources of inaccuracy. By integrating thefirst qualitative insights based on the PN withquantitative measures, it is possible to optimize the PNitself, to predict the inaccuracy of the system in adifferent setting. Results show that the proposed modelprovides a good prediction performance and suggests theoptimal processing approach.

Cinema and the Work of Doré

According to Ray Harryhausen, a special effects expert in the film industry, "Gustave Doré would have made a great director of photography . . . He saw things from the point of view of the camera." Doré's work has had a permanent impact on the imaginative realm of film since its very early days. In return, the silver screen has etched Doré into the 20th century imagination. Almost every film about the Bible since The Life and Passion of Jesus Christ produced by Pathé in 1902 refers to his illustrations, and every film adaptation of Dante or Don Quixote has used him as a model, from Georg Wilhelm Pabst and Orson Welles to Terry Gilliam. All films dealing with life in London in the Victorian era by directors ranging from David Lean, to Roman Polanski and Tim Burton draw on the visions in London: a pilgrimage for their sets. A large number of dream fantastical or phantasmagorical scenes take their inspiration from Doré's graphic world, beginning with Georges Méliès' A Trip to the Moon in 1902. In the realm of cartoons and animation, Walt Disney owes a huge debt to Doré. Doré primal forests, from Atala in particular, were also used in the various versions of King Kong from 1933 to the 2005 film by Peter Jackson, who had already drawn on Doré for The Lord of the Rings. Jean Cocteau was also indebted to the illustrations for Perrault's Fairy Tales for his Beauty and the Beast (1945), as was George Lucas for the character Chewbacca in Star Wars (1977) and even the Harry Potter film series. Through his influence on film history, Doré shaped the mass culture imagination.

The INTERMED questionnaire for predicting return to work after a multidisciplinary rehabilitation program for chronic low back pain.

OBJECTIVES: To evaluate the performance of the INTERMED questionnaire score, alone or combined with other criteria, in predicting return to work after a multidisciplinary rehabilitation program in patients with non-specific chronic low back pain. METHODS: The INTERMED questionnaire is a biopsychosocial assessment and clinical classification tool that separates heterogeneous populations into subgroups according to case complexity. We studied 88 patients with chronic low back pain who followed an intensive multidisciplinary rehabilitation program on an outpatient basis. Before the program, we recorded the INTERMED score, radiological abnormalities, subjective pain severity, and sick leave duration. Associations between these variables and return to full-time work within 3 months after the end of the program were evaluated using one-sided Fisher tests and univariate logistic regression followed by multivariate logistic regression. RESULTS: The univariate analysis showed a significant association between the INTERMED score and return to work (P<0.001; odds ratio, 0.90; 95% confidence interval, 0.86-0.96). In the multivariate analysis, prediction was best when the INTERMED score and sick leave duration were used in combination (P=0.03; odds ratio, 0.48; 95% confidence interval, 0.25-0.93). CONCLUSION: The INTERMED questionnaire is useful for evaluating patients with chronic low back pain. It could be used to improve the selection of patients for intensive multidisciplinary programs, thereby improving the quality of care, while reducing healthcare costs.

Meanings and perceptions of patient-centeredness in social work, nursing and medicine: A comparative study.

Answering patients' evolving, more complex needs has been recognized as a main incentive for the development of interprofessional care. Thus, it is not surprising that patient-centered practice (PCP) has been adopted as a major outcome for interprofessional education. Nevertheless, little research has focused on how PCP is perceived across the professions. This study aimed to address this issue by adopting a phenomenological approach and interviewing three groups of professionals: social workers (n = 10), nurses (n = 10) and physicians (n = 8). All the participants worked in the same department (the General Internal Medicine department of a university affiliated hospital). Although the participants agreed on a core meaning of PCP as identifying, understanding and answering patients' needs, they used many dimensions to define PCP. Overall, the participants expressed value for PCP as a philosophy of care, but there was the sense of a hierarchy of patient-centeredness across the professions, in which both social work and nursing regarded themselves as more patient-centered than others. On their side, physicians seemed inclined to accept their lower position in this hierarchy. Gieryn's concept of boundary work is employed to help illuminate the nature of PCP within an interprofessional context.

Predicting Non Return to Work after Orthopaedic Trauma: The Wallis Occupational Rehabilitation RisK (WORRK) Model.

BACKGROUND: Workers with persistent disabilities after orthopaedic trauma may need occupational rehabilitation. Despite various risk profiles for non-return-to-work (non-RTW), there is no available predictive model. Moreover, injured workers may have various origins (immigrant workers), which may either affect their return to work or their eligibility for research purposes. The aim of this study was to develop and validate a predictive model that estimates the likelihood of non-RTW after occupational rehabilitation using predictors which do not rely on the worker's background. METHODS: Prospective cohort study (3177 participants, native (51%) and immigrant workers (49%)) with two samples: a) Development sample with patients from 2004 to 2007 with Full and Reduced Models, b) External validation of the Reduced Model with patients from 2008 to March 2010. We collected patients' data and biopsychosocial complexity with an observer rated interview (INTERMED). Non-RTW was assessed two years after discharge from the rehabilitation. Discrimination was assessed by the area under the receiver operating curve (AUC) and calibration was evaluated with a calibration plot. The model was reduced with random forests. RESULTS: At 2 years, the non-RTW status was known for 2462 patients (77.5% of the total sample). The prevalence of non-RTW was 50%. The full model (36 items) and the reduced model (19 items) had acceptable discrimination performance (AUC 0.75, 95% CI 0.72 to 0.78 and 0.74, 95% CI 0.71 to 0.76, respectively) and good calibration. For the validation model, the discrimination performance was acceptable (AUC 0.73; 95% CI 0.70 to 0.77) and calibration was also adequate. CONCLUSIONS: Non-RTW may be predicted with a simple model constructed with variables independent of the patient's education and language fluency. This model is useful for all kinds of trauma in order to adjust for case mix and it is applicable to vulnerable populations like immigrant workers.

Geology, correlations, and geodynamic evolution of the Biga Peninsula (NW Turkey)

L?objectif de ce travail de recherche était de décrypter l?évolution géodynamique de la Péninsule de Biga (Turquie du N-O), à travers l?analyse de deux régions géologiques peu connues, le mélange de Çetmi et la zone d?Ezine (i.e. le Groupe d?Ezine et l?ophiolite de Denizgören). Une étude complète et détaillée de terrain (cartographie et échantillonnage) ainsi qu?une approche multidisciplinaire (sédimentologie de faciès, pétrographie sédimentaire et magmatique, micropaléontologie, datations absolues, géochimie sur roche totale, cristallinité de l?illite) ont permis d?obtenir de nouveaux éléments d?information sur la région considérée. ? Le mélange de Çetmi, de type mélange d?accrétion, affleure au nord et au sud de la Péninsule de Biga ; les principaux résultats de son étude peuvent se résumer comme suit: - Son aspect structural actuel (nature des contacts, organisation tectonique) est principalement dû au régime extensif Tertiaire présent dans la région. - Il est constitué de blocs de différentes natures : rares calcaires Scythien-Ladinien dans le faciès Han Bulog, blocs hectométriques de calcaires d?âge Norien-Rhaetien de rampe carbonatée, nombreux blocs décamétriques de radiolarites rouges d?âge Bajocien- Aptien, blocs/écailles de roches magmatiques de type spilites (basaltes à andésite), ayant des signatures géochimiques d?arcs ou intra-plaques. - La matrice du mélange est constituée d?une association greywacke-argilites dont l?âge Albien inférieur à moyen a été déterminé par palynologie. - L?activité du mélange s?est terminée avant le Cénomanien (discordance Cénomanienne au sommet du mélange, pas de bloc plus jeune que la matrice). - Du point de vue de ses corrélations latérales, le mélange de Çetmi partage plus de traits communs avec les mélanges se trouvant dans les nappes allochtones du Rhodope (nord de la Grèce et sud-ouest de la Bulgarie) qu?avec ceux de la suture Izmir-Ankara (Turquie); il apparaît finalement que sa mise en place s?est faite dans une logique balkanique (chevauchements vers le nord d?âge anté-Cénomanien). ? Le Groupe d?Ezine et l?ophiolite sus-jacente de Denizgören affleurent dans la partie ouest de la Péninsule de Biga. Le Groupe d?Ezine est une épaisse séquence sédimentaire continue (3000 m), subdivisée en trois formations, caractérisée chacune par un type de sédimentation spécifique, relatif à un environnement de dépôt particulier. De par ses caractéristiques (grande épaisseur, variations latérales de faciès et d?épaisseur dans les formations, érosion de matériel provenant de l?amont du bassin), le groupe d?Ezine est interprétée comme un dépôt syn-rift d?âge Permien moyen-Trias inférieur. Il pourrait représenter une partie de la future marge passive sud Rhodopienne à la suite de l?ouverture de l?océan Maliac/Méliata. L?ophiolite de Denizgören sus-jacente repose sur le Groupe d?Ezine par l?intermédiaire d?une semelle métamorphique à gradient inverse, du faciès amphibolite à schiste vert. L?âge du faciès amphibolite suggère une initiation de l?obduction au Barrémien (125 Ma, âge Ar/Ar); cet âge est unique dans le domaine égéen, mais il peut là aussi être relié à une logique balkanique, sur la base de comparaison avec le domaine Rhodopien. ? Toutes les unités précédentes (mélange de Çetmi, Groupe d?Ezine et ophiolite de Denizgören) ont passivement subi trois phases extensives pendant le Tertiaire. Dans la région d?Ezine et du mélange nord, les micaschistes HP sous-jacents ont été exhumés avant l?Eocène moyen. Dans le cas du mélange sud, cette exhumation Eocene est en partie enregistrée dans les mylonites séparant le mélange du dôme métamorphique sous-jacent du Kazda?. Le mélange sud est dans tous les cas fortement érodé à la suite de la double surrection du dôme du Kazda?, près de la lim ite Oligocène/Miocene et pendant le Plio- Quaternaire. Dans le premier cas, ce soulèvement est caractérisé par le développement d?une faille de détachement à faible pendage, qui contrôle à la fois l?exhumation du massif, et la formation d?un bassin sédimentaire syntectonique, de type bassin supradétachement; quant à la phase extensive la plus récente, elle est contrôlée par le jeu de failles normales à forts pendages qui remanient l?ensemble des structures héritées, et dictent la géomorphologie actuelle de la région. ? Il est possible de proposer un scénario pour l?évolution géodynamique de la Péninsule de Biga, basé sur l?ensemble des résultats précédents et sur les données de la géologie régionale ; ses points principaux sont: - La Péninsule de Biga fait partie de la marge Rhodopienne. - Le Groupe d?Ezine est un témoin de la marge passive nord Maliac/Méliata. - L?ophiolite de Denizgören et le mélange de Çetmi ont été mis en place tous deux vers le nord sur la marge précédente, respectivement au Barrémien et à l?Albien terminal- Cénomanien inférieur. - Une forte composante décrochante durant l?emplacement est suggérée par la préservation de fragments de la marge passive et l?absence de métamorphisme dans la plaque inférieure. - Tous les évènements précédents ont été largement affectés par le régime d?extension Tertiaire.<br/><br/>The purpose of this study is to unravel the geodynamic evolution of the Biga Peninsula (NW Turkey) through the detailed study of two poorly known areas, the Çetmi mélange and the Ezine zone (i.e. the Ezine Group and the Denizgören ophiolite). The methodology was based on a detailed field work and a multidisciplinary approach. ? The accretion-related Çetmi mélange is mainly cropping out north and south of the Biga Peninsula; the main results of its study can be summarized as follows: -Its present-day structural aspect (type of contacts, tectonic organisation) is largely inherited from the Tertiary extensional regime in the region. -It is made of blocks of various natures: Han Bulog limestones with a Scythian to Ladinian age, common carbonate ramp Norian-Rhaetian limestones (biggest blocks of the mélange), red radolarite with a Bajocian to Aptian age; the most common lithology of the mélange is made by block/slices of spilitic magmatic rocks (basalt to andesite); they have volcanic arc or within plate basalt geochemical signatures. -The matrix of the mélange is made of a greywacke-shale association of Early-Middle Albian age. - The mélange stopped its activity before the Cenomanian (no younger blocks than the matrix, and Cenomanian unconformity). - If compared to the regional geology, the Çetmi mélange shares some characteristics with the Izmir-Ankara mélanges (less), and with the mélanges from allochthonous nappes found in eastern Rhodope (more); it appears finally that its emplacement is related to a Balkanic logic (ante-Cenomanian northward thrusting). ? The Ezine Group and the overlying Denizgören ophiolite are cropping out in the western part of the Biga Peninsula. The Ezine Group is a thick sedimentary sequence interpreted as a syn-rift deposit of Middle Permian-Early Triassic age. It represents a part of the south Rhodopian passive margin, following the opening of the Maliac/Meliata oceanic domain. The Denizgören ophiolite has been emplaced northward on the Ezine Group in the Barremian (125 Ma, age of the amphibolitic sole); this age is unique in the Aegean domain, but here again, it may be related to a Balkan logic. ? All the previous units (Çetmi mélange, Ezine Group and Denizgören ophiolite) have passively suffered two extensional regimes during the Tertiary. In the Ezine and northern Çetmi mélange area, the underlying HP Çamlýca micaschists were exhumed before the Middle Eocene. As for the southern mélange, it was strongly eroded following the Late Oligocene to Quaternary uplift of the underlying Kazda? Massif. This uplift was characterized by the development of a low-angle detachment fault controlling a part of the exhumation, as well as the development of a supra-detachment basin. ? Based on the previous results, and on the data from the regional geology, one can propose a scenario for the geodynamic evolution of the Biga Peninsula. Its key points are:- The Biga Peninsula is belonging to the Rhodope margin. - The Ezine Group is a remnant of the northern Maliac/Meliata passive margin. - Both the Denizgören ophiolite and the Çetmi mélange have been emplaced northward on the previous margin, respectively in the Barremian and in the Late Albian-Early Cenomanian times. - The preservation of the remnants of the Rhodope margin, as well as the absence of metamorphism in the lower plate suggest a strong strike-slip component during the emplacements. - All the previous events are (at least) partly obliterated by the Tertiary extensional regime.<br/><br/>Le géologue est comme un «historien» de la Terre, qui porte un intérêt particulier à l?étude du passé de notre planète; ce dernier, très ancien, se mesure en dizaines ou centaines de millions d?années (Ma). Or le visage de la terre a constamment évolué au cours des ces millions d?années écoulés, car les plaques (continentales et océaniques) qui composent son enveloppe superficielle ne restent pas immobiles, mais se déplacent continuellement à sa surface, à une vitesse de l?ordre du cm/an (théorie de la tectonique des plaques); c?est ainsi, par exemple, que des océans naissent, grandissent, puis finissent par se refermer. On appelle sutures océaniques, les zones, aujourd?hui sur la terre ferme, où l?on retrouve les restes d?océans disparus. Ces sutures sont caractérisées par deux associations distinctes de roches, que l?on appelle les mélanges et les ophiolites; ces mélanges et ophiolites sont donc les témoins de l?activité passée d?un océan aujourd?hui refermé. L?équipe de recherche dans laquelle ce travail à été réalisé s?intéresse à un vaste domaine océanique fossile: l?océan Néotéthys. Cet océan, de plusieurs milliers de kilomètres de large, séparait alors l?Europe et l?Asie au nord, de l?Afrique, l?Inde et l?Australie au sud. De cet océan, il n?en subsiste aujourd?hui qu?une infime partie, qui se confond avec notre mer Méditerranée actuelle. Or, tout comme l?océan Pacifique est bordé de mers plus étroites (Mer de Chine, du Japon, etc?), l?océan Néotéthys était bordé au nord de mers marginales. C?est dans ce cadre que s?est inscrit mon travail de thèse, puisqu?il a consisté en l?étude d?une suture océanique (mélange plus ophiolite), témoin d?une des mers qui bordait l?océan Néotéthys sur sa marge nord. L?objectif était de préciser de quelle suture il s?agissait, puis de déterminer quand et comment elle avait fonctionné (i.e son évolution géologique). Les roches qui composent cette suture affleurent aujourd?hui en Turquie nord occidentale dans la Péninsule de Biga. Au nord et au sud de la péninsule se trouvent les zones géologique du mélange de Çetmi, et à l?ouest, le Groupe d?Ezine et l?ophiolite susjacente, dite ophiolite de Denizgören. Une étude complète et détaillée de terrain (cartographie, échantillonnage), suivie de diverses analyses en laboratoire (détermination de leur âge, de leur condition de formation, etc?), ont permis d?aboutir aux principaux résultats suivants : - Mise en évidence dans le mélange de Çetmi des témoins (1) de l?océan Lycien disparu (ancienne mer marginale de la Néotéthys), et (2) de la marge continentale qui le bordait au nord. - Fin de l?activité du mélange de Çetmi il y a environ 105 Ma (Albien). - Le mélange de Çetmi est difficilement corrélable dans le temps avec les unités semblables affleurant dans la région d?étude (unicité du mélange), ce qui implique des conditions particulière de formation. - L?ophiolite de Denizgören est un morceau d?océan Lycien posé sur un reste préservé de sa marge continentale nord. - Cette dernière est représentée sur le terrain par une succession de roches caractéristiques, le Groupe d?Ezine. Celui-ci est lui-même un témoin de l?ouverture d?un océan marginal de la Néotethys antérieur au Lycien, l?océan Maliac, qui s?est ouvert il y a 245 Ma (Permien-Trias). - La mise en place de l?ophiolite de Denizgören sur le Groupe d?Ezine (125 Ma, Barrémien) est antérieure à la mise en place du mélange de Çetmi. - Il apparaît que ces deux mises en place sont contemporaines de la formation de la chaîne des Balkans, terminée avant le Cénomanien (100 Ma). - L?évolution dans le temps des objets précédents (océans, marges continentales) montre de grands mouvements latéraux est-ouest entre ces objets (translation). Ce qui implique que les roches que l?on retrouve aujourd?hui sur un transect nord-sud ne l?étaient pas nécessairement auparavant. - Enfin, il s?avère que le mélange de Çetmi, l?ophiolite de Denizgören, et le Groupe d?Ezine ont subi par la suite des déformations extensives importantes qui ont considérablement perturbé le schéma post-mise en place.