Addition of MR imaging features and genetic biomarkers strengthens glioblastoma survival prediction in TCGA patients.

PURPOSE: The purpose of our study was to assess whether a model combining clinical factors, MR imaging features, and genomics would better predict overall survival of patients with glioblastoma (GBM) than either individual data type. METHODS: The study was conducted leveraging The Cancer Genome Atlas (TCGA) effort supported by the National Institutes of Health. Six neuroradiologists reviewed MRI images from The Cancer Imaging Archive (http://cancerimagingarchive.net) of 102 GBM patients using the VASARI scoring system. The patients' clinical and genetic data were obtained from the TCGA website (http://www.cancergenome.nih.gov/). Patient outcome was measured in terms of overall survival time. The association between different categories of biomarkers and survival was evaluated using Cox analysis. RESULTS: The features that were significantly associated with survival were: (1) clinical factors: chemotherapy; (2) imaging: proportion of tumor contrast enhancement on MRI; and (3) genomics: HRAS copy number variation. The combination of these three biomarkers resulted in an incremental increase in the strength of prediction of survival, with the model that included clinical, imaging, and genetic variables having the highest predictive accuracy (area under the curve 0.679±0.068, Akaike's information criterion 566.7, P<0.001). CONCLUSION: A combination of clinical factors, imaging features, and HRAS copy number variation best predicts survival of patients with GBM.

Identification of imaging selection patterns in acute ischemic stroke patients and the influence on treatment and clinical trial enrollment decision making.

BACKGROUND AND PURPOSE: For the STroke Imaging Research (STIR) and VISTA-Imaging Investigators The purpose of this study was to collect precise information on the typical imaging decisions given specific clinical acute stroke scenarios. Stroke centers worldwide were surveyed regarding typical imaging used to work up representative acute stroke patients, make treatment decisions, and willingness to enroll in clinical trials. METHODS: STroke Imaging Research and Virtual International Stroke Trials Archive-Imaging circulated an online survey of clinical case vignettes through its website, the websites of national professional societies from multiple countries as well as through email distribution lists from STroke Imaging Research and participating societies. Survey responders were asked to select the typical imaging work-up for each clinical vignette presented. Actual images were not presented to the survey responders. Instead, the survey then displayed several types of imaging findings offered by the imaging strategy, and the responders selected the appropriate therapy and whether to enroll into a clinical trial considering time from onset, clinical presentation, and imaging findings. A follow-up survey focusing on 6 h from onset was conducted after the release of the positive endovascular trials. RESULTS: We received 548 responses from 35 countries including 282 individual centers; 78% of the centers originating from Australia, Brazil, France, Germany, Spain, United Kingdom, and United States. The specific onset windows presented influenced the type of imaging work-up selected more than the clinical scenario. Magnetic Resonance Imaging usage (27-28%) was substantial, in particular for wake-up stroke. Following the release of the positive trials, selection of perfusion imaging significantly increased for imaging strategy. CONCLUSIONS: Usage of vascular or perfusion imaging by Computed Tomography or Magnetic Resonance Imaging beyond just parenchymal imaging was the primary work-up (62-87%) across all clinical vignettes and time windows. Perfusion imaging with Computed Tomography or Magnetic Resonance Imaging was associated with increased probability of enrollment into clinical trials for 0-3 h. Following the release of the positive endovascular trials, selection of endovascular only treatment for 6 h increased across all clinical vignettes.

International survey of acute stroke imaging used to make revascularization treatment decisions.

BACKGROUND: To assess the differences across continental regions in terms of stroke imaging obtained for making acute revascularization therapy decisions, and to identify obstacles to participating in randomized trials involving multimodal imaging. METHODS: STroke Imaging Repository (STIR) and Virtual International Stroke Trials Archive (VISTA)-Imaging circulated an online survey through its website, through the websites of national professional societies from multiple countries as well as through email distribution lists from STIR and the above mentioned societies. RESULTS: We received responses from 223 centers (2 from Africa, 38 from Asia, 10 from Australia, 101 from Europe, 4 from Middle East, 55 from North America, 13 from South America). In combination, the sites surveyed administered acute revascularization therapy to a total of 25,326 acute stroke patients in 2012. Seventy-three percent of these patients received intravenous (i.v.) tissue plasminogen activator (tPA), and 27%, endovascular therapy. Vascular imaging was routinely obtained in 79% (152/193) of sites for endovascular therapy decisions, and also as part of standard IV tPA treatment decisions at 46% (92/198) of sites. Modality, availability and use of acute vascular and perfusion imaging before revascularization varied substantially between geographical areas. The main obstacles to participate in randomized trials involving multimodal imaging included: mainly insufficient research support and staff (50%, 79/158) and infrequent use of multimodal imaging (27%, 43/158) . CONCLUSION: There were significant variations among sites and geographical areas in terms of stroke imaging work-up used tomake decisions both for intravenous and endovascular revascularization. Clinical trials using advanced imaging as a selection tool for acute revascularization therapy should address the need for additional resources and technical support, and take into consideration the lack of routine use of such techniques in trial planning.

Ablation des tachycardies ventriculaires chez les patients coronariens porteurs d'un défibrillateur interne

Contexte Le développement du défibrillateur automatique interne (DAI) a considérablement amélioré la survie des patients souffrant de tachycardies ventriculaires (TV) soutenues; cependant, ce traitement n'est pas curatif mais palliatif1. En effet, il ne permet pas d'éradiquer les TV mais les interrompt par diverses thérapies (stimulation ventriculaire; chocs). Plusieurs études ont montré que l'ablation des TV par radiofréquence permet de diminuer l'incidence des chocs délivrés par le DAI et ainsi d'améliorer la qualité de vie des patients2. Objectifs Notre objectif est de déterminer les résultats de l'ablation par radiofréquence à moyen terme, dans une population de patients souffrant d'une cardiopathie ischémique avec tachycardies ventriculaires soutenues et porteurs d'un DAI. Méthode Il s'agit d'une étude clinique rétrospective monocentrique comprenant des patients avec ancien infarctus, TV soutenue et porteurs d'un DAI hospitalisés pour ablation de la TV dans le Service de cardiologie du CHUV. Les données ont été obtenues à partir des dossiers cliniques archivés (Archimède), de la banque de données DAI et ablation (programmes filemaker) du service de cardiologie ainsi que de l'interrogation des mémoires des DAI. L'analyse de ces données a été réalisée à partir de tableaux Excel. Les moyennes et médianes des données récoltées ont été calculées ; les tests de Student et de Mann-Whitney ont été utilisés pour comparer les résultats avant et après ablation. Résultats Le collectif comprend 21 patients (19 hommes), âge moyen : 65 ± 11 ans. La fraction d'éjection du ventricule gauche est de 28±10%. La moyenne des thérapies du DAI en réponse aux TV au cours des six mois précédant l'ablation est de 65.1 ± 177.9 thérapies avec une médiane de 8 thérapies. Cette moyenne baisse à 11.5 ± 26.7 au cours des six mois qui ont suivi l'ablation et la médiane a chuté à 0 intervention du DAI. L'incidence des TV, décroit clairement après l'ablation. Cette diminution est statistiquement significative (p = 0.046). Après les six mois de suivi, 12 des 21 patients (57%) n'ont eu aucune récidive ; 4 patients (19%) ont eu une diminution du nombre de chocs. Au total, trois quarts des patients bénéficient donc de l'ablation. Conclusion Nos résultats démontrent une diminution spectaculaire et significative de l'incidence des TV post-infarctus après ablation par radiofréquence chez les porteurs de DAI.

Sources en flux: collecter, analyser, archiver, pérenniser. Enseignements d'une collecte de tweets sur le Centenaire de la Grande Guerre

En collectant plus de deux millions de tweets reliés au centenaire de la Grande Guerre, de nombreuses questions méthodologiques se sont posées, interrogeant par exemple la notion de corpus, les relations entre historien.ne.s et archivistes, le traitement du passé à une ère de données massives. Cette intervention se penche sur l'une de ces questions: comment fonder une recherche sur des sources primaires en flux? Comment résoudre la contradiction inhérente entre l'archive, réputée figée, et les données nées numériques qui sont émises en flux?