Uncovering hidden duplicated content in public transcriptomics data.

As part of the development of the database Bgee (a dataBase for Gene Expression Evolution), we annotate and analyse expression data from different types and different sources, notably Affymetrix data from GEO and ArrayExpress, and RNA-Seq data from SRA. During our quality control procedure, we have identified duplicated content in GEO and ArrayExpress, affecting ∼14% of our data: fully or partially duplicated experiments from independent data submissions, Affymetrix chips reused in several experiments, or reused within an experiment. We present here the procedure that we have established to filter such duplicates from Affymetrix data, and our procedure to identify future potential duplicates in RNA-Seq data. Database URL: http://bgee.unil.ch/

Appropriateness of methadone maintenance treatment for opiate addiction: evaluation by an expert panel.

With some 30,000 dependent persons, opiate addiction constitutes a major public health problem in Switzerland. The Swiss Federal Office of Public Health (FOPH) has long played a leading role in the prevention and treatment of opiate addiction and in research on effective means of containing the epidemic of opiate addiction and its consequences. Major milestones on that path have been the successive "Methadone reports" published by that Office and providing guidance on the care of opiate addiction with substitution treatment. In view of updating the recommendations for the appropriateness of substitution treatment for opiate addiction, in particular for the prescription of methadone, the FOPH commissioned a multi-component project involving the following elements. A survey of current attitudes and practices in Switzerland related to opiate substitution treatment Review of Swiss literature on methadone substitution treatment Review of international literature on methadone substitution treatment National Methadone Substitution Conference Multidisciplinary expert panel to evaluate the appropriateness of substitution treatment. The present report documents the process and summarises the results of the latter element above. The RAND appropriateness method (RAM) was used to distil from literature-based evidence and systematically formulated expert opinion, areas where consensus exist on the appropriateness (or inappropriateness) of methadone maintenance treatment (MMT) and areas where disagreement or uncertainty persist and which should be further pursued. The major areas which were addressed by this report are Initial assessment of candidates for MMT Appropriate settings for initiation of MMT (general and special cases) Appropriateness of methadone supportive therapy Co-treatments and accompanying measures Dosage schedules and pharmacokinetic testing Withdrawal from MMT Miscellaneous questions Appropriateness of other (non-methadone) substitution treatment Summary statements for each of the above categories are derived from the panel meeting and presented in the report. In the "first round", agreement was observed for 31% of the 553 theoretical scenarios evaluated. The "second round" rating, following discussion of divergent ratings, resulted in a much higher agreement among panellists, reaching 53% of the 537 scenarios. Frank disagreement was encountered for 7% of all scenarios. Overall 49% of the clinical situations (scenarios) presented were considered appropriate. The areas where at least 50% of the situations were considered appropriate were "initial assessment of candidates for MMT", the "appropriate settings for initiation of MMT", the "appropriate settings for methadone supportive treatment" and "Appropriateness of other (non-methadone) substitution treatment". The area where there was the least consensus on appropriateness concerned "appropriateness of withdrawal from MMT" (6%). The report discusses the implications and limitations of the panel results and provides recommendations for the dissemination, application, and future use of the criteria for the appropriateness of MMT. The RAND Appropriateness Method proved to be an accepted and appreciated method to assess the appropriateness of methadone maintenance treatment for opiate addicts. In the next step, the results of the expert panel process must now be combined with those of the Swiss and international literature reviews and the survey of current attitudes and practices in Switzerland, to be synthesized into formal practice guidelines. Such guidelines should be disseminated to all concerned, promoted, used and rigorously evaluated for compliance and outcome.

Public sector rationing and private sector selection [paper accepted and forthcoming in Journal of Public Economic Theory]

We study the interaction between nonprice public rationing and prices in the private market. Under a limited budget, the public supplier uses a rationing policy. A private firm may supply the good to those consumers who are rationed by the public system. Consumers have different amounts of wealth, and costs of providing the good to them vary. We consider two regimes. First, the public supplier observes consumers' wealth information; second, the public supplier observes both wealth and cost information. The public supplier chooses a rationing policy, and, simultaneously, the private firm, observing only cost but not wealth information, chooses a pricing policy. In the first regime, there is a continuum of equilibria. The Pareto dominant equilibrium is a means-test equilibrium: poor consumers are supplied while rich consumers are rationed. Prices in the private market increase with the budget. In the second regime, there is a unique equilibrium. This exhibits a cost-effectiveness rationing rule; consumers are supplied if and only if their costbenefit ratios are low. Prices in the private market do not change with the budget. Equilibrium consumer utility is higher in the cost-effectiveness equilibrium than the means-test equilibrium [Authors]

Sozial- und Präventivmedizin - Public Health

[Table des matières] 1. Begriffe und Konzepte. 1.1. Public Health, Sozial- und Präventivmedizin, Partnerdisziplinen. 1.2. Sozialmedizin und Gesundheitssoziologie. 2. Methoden und Grundlagen. 2.1. Epidemiologie. 2.2. Biostatistik. 2.3. Demografie und Gesundheitsindikatoren. 3. Interventionen, Massnahmen und Anwendungen. 3.1. Organisation des Gesundheitswesens. 3.2. Versicherungsmedizin. 3.3. Prävention und Gesundheitsförderung. 3.4. Chronische und degenerative Krankheiten, Unfälle. 3.5. Infektionskrankheiten. 3.6. Humanernährung. 3.7. Ältere und Alte. 3.8. Arbeitsmedizin. 3.9. Umweltmedizin. 3.10. Internationale Gesundheit. Anhang.

L'ethos public en tant que processus social dynamique

Les réformes administratives du secteur public, regroupées sous l'appellation de la Nouvelle gestion publique, affectent durablement le contexte dans lequel travaillent les agents publics, questionnant leurs valeurs et motivations, voire plus fondamentalement leur identité professionnelle. La confrontation actuelle des modes de fonctionnement privé et public a le mérite de soulever l'interrogation sur la spécificité de ce qui anime ces deux domaines d'action humaine. Bien que certaines études fassent état de l'existence d'un ethos spécifique au secteur public, il est souvent réduit aux questions abstraites de valeurs ou aux motivations individuelles des agents. Or l'ethos public est plus qu'une collection de valeurs particulières comme la poursuite de l'impartialité ou l'intégrité. C'est aussi plus que la somme des motivations individuelles. L'ethos public, c'est une conception du vivre ensemble qui permet de concrétiser des valeurs dans l'action et qui peut soutenir une visée éthique du bien commun. Voilà ce qu'une étude exploratoire nous permet d'avancer. Cette recherche vise à comprendre, à partir de récits de vie de gestionnaires publics et du concept d'identité narrative, comment ils en sont venus à comprendre et interpréter la spécificité du secteur public et comment cet ethos se caractérise pour eux en termes de relations et d'interactions sociales avec leur personnel, les politiques, les groupes d'acteurs avec lesquels ils interagissent et les citoyens. Considérant le rôle essentiel exercé par les gestionnaires publics dans le fonctionnement du système politico-administratif, et l'importance des dynamiques sociales pour le fonctionnement et l'intégrité de l'action de l'État, les résultats de cette recherche sont très utiles pour une réflexion approfondie sur les réformes en cours.

Le service public au XXIème siècle : identités et motivations au sein de l'après-fonctionnariat

Les multiples réformes qui ont touché les administrations publiques ont profondément transformé l'environnement de travail des employés, les projetant dans une ère nouvelle appelée ici "l'après-fonctionnariat". Ils font actuellement face à de nouvelles conditions d'emploi et manières de travailler ayant pour objectif de rendre le service public davantage performant. Avec quels impacts sur leurs identités et leurs motivations au travail ? Voici les résultats d'une recherche réalisée en Suisse.

Antecedents of Job Satisfaction, Organizational Commitment and Stress in a Public Hospital: A P-E Fit Perspective

This article tests different P-E fit dimensions in order to assess their impact on three work outcomes: job satisfaction; organizational commitment; and stress perception. Findings shows that P-E fit dimensions have differentiated effects on its dependent variables. This study contributes to several important academic discussions. The first concerns the model tested, which contains several P-E fit dimensions. The second scientific contribution is to consider P-E fit dimensions as antecedents of three job outcomes. The third contribution concerns the development and testing of a new P-E fit dimension called "person-reforms" fit.

Quelle place pour la psychothérapie dans la psychiatrie publique [What place for psychotherapy in public psychiatry?].

The question of the place of psychotherapy in psychiatric public care is posed in this article. We will address this question first by presenting two clinical and research programmes which were implemented in a clinical psychiatric unit, section Karl Jaspers (Service of General Psychiatry) of the Department of Psychiatry CHUV, in Lausanne with the collaboration of the University Institute of Psychotherapy. The first one puts forward psychodynamic psychotherapy of depressed inpatients; the clinical programme and the research questions on efficacy of this treatment are discussed. The second focuses on the early treatment of patients with Borderline Personality Disorder, in particular in its research question on the effect of the motive-oriented therapeutic relationship in this process. We conclude by underlining the convergences of the two programmes.