Representació no-lineal de les imatges per a codificació perceptiva

JPEG2000 és un estàndard de compressió d’imatges que utilitza la transformada wavelet i, posteriorment, una quantificació uniforme dels coeficients amb dead-zone. Els coeficients wavelet presenten certes dependències tant estadístiques com visuals. Les dependències estadístiques es tenen en compte a l'esquema JPEG2000, no obstant, no passa el mateix amb les dependències visuals. En aquest treball, es pretén trobar una representació més adaptada al sistema visual que la que proporciona JPEG2000 directament. Per trobar-la utilitzarem la normalització divisiva dels coeficients, tècnica que ja ha demostrat resultats tant en decorrelació estadística de coeficients com perceptiva. Idealment, el que es voldria fer és reconvertir els coeficients a un espai de valors en els quals un valor més elevat dels coeficients impliqui un valor més elevat d'aportació visual, i utilitzar aquest espai de valors per a codificar. A la pràctica, però, volem que el nostre sistema de codificació estigui integrat a un estàndard. És per això que utilitzarem JPEG2000, estàndard de la ITU que permet una elecció de les distorsions en la codificació, i utilitzarem la distorsió en el domini de coeficients normalitzats com a mesura de distorsió per a escollir quines dades s'envien abans.

Web taller de servei ràpid :Desenvolupament d'una aplicació web amb tecnologies J2EE

El projecte és una web per a un taller mecànic dels anomenats ¿de servei ràpid¿, amb tecnologies J2EE.Els clients del taller poden demanar dia i hora per fer unareparació al seu cotxe. I el taller, en el seu cas el cap de taller o persona autoritzada, pot llistar les reparacions del dia.

Avaluació del consum d'energia eléctrica d'una indústria càrnia

L’objecte d’aquest treball ha estat avaluar el consum d’energia elèctrica de la industria BECSA, situada al municipi de Palol de Revardit i dedicada a l’elaboració de pernil curat preparat per a ser llescat industrialment. En primer lloc es va estudiar el procés productiu de la indústria i la maquinària, per tal de determinar les potencies activa i reactiva de cadascuna de les màquines. Amb les potències per una banda, i l’estudi dels temps de treball de les màquines per l’altra, es van determinar els consums d’energia activa i reactiva que suposava el procés. A partir de l’anàlisi de les dades obtingudes, les factures elèctriques, les tarifes i complements per destinació horària, es van proposar una sèrie de millores per a poder disminuir els costos del consum d’energia elèctrica de la indústria

Crème Noisette. What else?

Segurament us sonarà aquest eslògan: Nespresso, What else? Café, cuerpo y alma. Segurament, si us mencionem a l’actor George Clooney, ja no només l’identifiqueu amb una de les seves pel·lícules, sinó que directament us ve laimatge de l’anunci que protagonitza per Nespresso. I fins i tot, segurament, molts dels que esteu llegint aquest text, no us heu pogut resistir a la temptació i ja disposeu d’una màquina Nespresso a casa vostra. Nespresso s’ha convertiten un fenomen de masses i en una de les empreses que més està creixent en aquests últims anys. Per tots aquests motius, a l’hora de triar quin seria l’eix fonamental del nostre treball, vam decantar-nos per aquesta empresa.El que pretenem amb aquest treball és esbrinar tots els passos que s’han de seguir per a llençar un nou producte al mercat i analitzar la importància que té el marketing per a les empreses d’avui dia. Hem emmarcat aquests dos objectius dins de l’empresa Nespresso, i és per això que portarem a terme el llançament d’una nova càpsula d’un gust original, analitzarem com serà el seu procés productiu i dissenyarem les possibles tècniques de promoció per tal que tingui èxit. Pel que fa al segon objectiu, comprovarem mitjançant un experiment el grau d’influència que té el marketing sobre els clients.Referent a les conclusions que hem extret amb el nostre treball, aquestes són, per una part, la creació de Crème Noisette, una nova càpsula que no us deixarà indiferents; i per l’altra, que Nespresso basa el seu èxit en la qualitat, però sempre acompanyada d’una gran campanya de marketing.Voleu continuar descobrint els secrets que amaga el llançament d’una nova càpsula? Voleu saber si la gent aprecia realment totes les varietats que ofereix Nespresso? Per a descobrir-ho, us convidem a llegir el nostre treball.

Mathematics in Catalonia: 1996-2002

The aim of this article is to present the main conclusions of the Report on research in Catalonia for the area of mathematics**. The report was prepared by Joaquim Bruna, Marta Sanz, Joan de Solà-Morales and the author of this text, and published by the Institute for Catalan Studies in 1998. In the report, scientific activity in the area of mathematics was measured essentially by examining two parameters: papers published in specialised journals and doctoral theses read. It should be recognised that a considerable amount of activity in the field of mathematics consists of applying existing knowledge to the resolution of practical technological problems that arise in particular companies. This kind of scientific activity was not measured in any way in the report due to the difficulty of obtaining objective data. This article is divided into the following sections: human resources, scientific production, funding, research publications, research centres, and conclusions.

ABS: a database of Annotated regulatory Binding Sites from orthologous promoters

Information about the genomic coordinates and the sequence of experimentally identified transcription factor binding sites is found scattered under a variety of diverse formats. The availability of standard collections of such high-quality data is important to design, evaluate and improve novel computational approaches to identify binding motifs on promoter sequences from related genes. ABS (http://genome.imim.es/datasets/abs2005/index.html) is a public database of known binding sites identified in promoters of orthologous vertebrate genes that have been manually curated from bibliography. We have annotated 650 experimental binding sites from 68 transcription factors and 100 orthologous target genes in human, mouse, rat or chicken genome sequences. Computational predictions and promoter alignment information are also provided for each entry. A simple and easy-to-use web interface facilitates data retrieval allowing different views of the information. In addition, the release 1.0 of ABS includes a customizable generator of artificial datasets based on the known sites contained in the collection and an evaluation tool to aid during the training and the assessment of motif-finding programs.

Mutation patterns of amino acid tandem repeats in the human proteome

Background: Amino acid tandem repeats are found in nearly one-fifth of human proteins. Abnormal expansion of these regions is associated with several human disorders. To gain further insight into the mutational mechanisms that operate in this type of sequence, we have analyzed a large number of mutation variants derived from human expressed sequence tags (ESTs).Results: We identified 137 polymorphic variants in 115 different amino acid tandem repeats. Of these, 77 contained amino acid substitutions and 60 contained gaps (expansions or contractions of the repeat unit). The analysis showed that at least about 21% of the repeats might be polymorphic in humans. We compared the mutations found in different types of amino acid repeats and in adjacent regions. Overall, repeats showed a five-fold increase in the number of gap mutations compared to adjacent regions, reflecting the action of slippage within the repetitive structures. Gap and substitution mutations were very differently distributed between different amino acid repeat types. Among repeats containing gap variants we identified several disease and candidate disease genes.Conclusion: This is the first report at a genome-wide scale of the types of mutations occurring in the amino acid repeat component of the human proteome. We show that the mutational dynamics of different amino acid repeat types are very diverse. We provide a list of loci with highly variable repeat structures, some of which may be potentially involved in disease.

Positional bias of general and tissue-specific regulatory motifs in mouse gene promoters

Background: The arrangement of regulatory motifs in gene promoters, or promoterarchitecture, is the result of mutation and selection processes that have operated over manymillions of years. In mammals, tissue-specific transcriptional regulation is related to the presence ofspecific protein-interacting DNA motifs in gene promoters. However, little is known about therelative location and spacing of these motifs. To fill this gap, we have performed a systematic searchfor motifs that show significant bias at specific promoter locations in a large collection ofhousekeeping and tissue-specific genes.Results: We observe that promoters driving housekeeping gene expression are enriched inparticular motifs with strong positional bias, such as YY1, which are of little relevance in promotersdriving tissue-specific expression. We also identify a large number of motifs that show positionalbias in genes expressed in a highly tissue-specific manner. They include well-known tissue-specificmotifs, such as HNF1 and HNF4 motifs in liver, kidney and small intestine, or RFX motifs in testis,as well as many potentially novel regulatory motifs. Based on this analysis, we provide predictionsfor 559 tissue-specific motifs in mouse gene promoters.Conclusion: The study shows that motif positional bias is an important feature of mammalianproximal promoters and that it affects both general and tissue-specific motifs. Motif positionalconstraints define very distinct promoter architectures depending on breadth of expression andtype of tissue.

On homology searches by protein Blast and the characterization of the age of genes

Background: It has been shown in a variety of organisms, including mammals, that genes that appeared recently in evolution, for example orphan genes, evolve faster than older genes. Low functional constraints at the time of origin of novel genes may explain these results. However, this observation has been recently attributed to an artifact caused by the inability of Blast to detect the fastest genes in different eukaryotic genomes. Distinguishing between these two possible explanations would be of great importance for any studies dealing with the taxon distribution of proteins and the origin of novel genes. Results: Here we used simulations of protein sequences to examine the capacity of Blast to detect proteins of diverse evolutionary rates in the different species of an eukaryotic phylogenetic tree that included metazoans, fungi and plants. We simulated the evolution of protein genes with the same evolutionary rates than those observed in functional mammalian genes and with among-site rate heterogeneity. Under these conditions, we found that only a very small percentage of simulated ancestral eukaryotic proteins was affected by the Blast artifact. We show that the good detectability of Blast is due to the heterogeneity of protein evolutionary rates at different sites, since only a small conserved motif in a sequence suffices to detect its homologues. Our results indicate that Blast, at least when applied within eukaryotes, only misses homologues of extremely fast-evolving sequences, which are rare in the mammalian genome, as well as sequences evolving homogeneously or pseudogenes.Conclusion: Although great care should be exercised in the recognition of remote homologues, most functional mammalian genes can be detected in eukaryotic genomes by Blast. That is, the majority of functional mammalian genes are not as fast as for not being detected in other metazoans, fungi or plants, if they had been present in these organisms. Thus, the correlation previously found between age and rate seems not to be due to a pure Blast artifact, at least for mammals. This may have important implications to understand the mechanisms by which novel genes originate.

Differences in the evolutionary history of disease genes affected by dominant or recessive mutations

Background: Global analyses of human disease genes by computational methods have yielded important advances in the understanding of human diseases. Generally these studies have treated the group of disease genes uniformly, thus ignoring the type of disease-causing mutations (dominant or recessive). In this report we present a comprehensive study of the evolutionary history of autosomal disease genes separated by mode of inheritance.Results: We examine differences in protein and coding sequence conservation between dominant and recessive human disease genes. Our analysis shows that disease genes affected by dominant mutations are more conserved than those affected by recessive mutations. This could be a consequence of the fact that recessive mutations remain hidden from selection while heterozygous. Furthermore, we employ functional annotation analysis and investigations into disease severity to support this hypothesis. Conclusion: This study elucidates important differences between dominantly- and recessively-acting disease genes in terms of protein and DNA sequence conservation, paralogy and essentiality. We propose that the division of disease genes by mode of inheritance will enhance both understanding of the disease process and prediction of candidate disease genes in the future.

Comparative analysis of amino acid repeats in rodents and humans

Amino acid tandem repeats, also called homopolymeric tracts, are extremely abundant in eukaryotic proteins. To gain insight into the genome-wide evolution of these regions in mammals, we analyzed the repeat content in a large data set of rat-mouse-human orthologs. Our results show that human proteins contain more amino acid repeats than rodent proteins and that trinucleotide repeats are also more abundant in human coding sequences. Using the human species as an outgroup, we were able to address differences in repeat loss and repeat gain in the rat and mouse lineages. In this data set, mouse proteins contain substantially more repeats than rat proteins, which can be at least partly attributed to a higher repeat loss in the rat lineage. The data are consistent with a role for trinucleotide slippage in the generation of novel amino acid repeats. We confirm the previously observed functional bias of proteins with repeats, with overrepresentation of transcription factors and DNA-binding proteins. We show that genes encoding amino acid repeats tend to have an unusually high GC content, and that differences in coding GC content among orthologs are directly related to the presence/absence of repeats. We propose that the different GC content isochore structure in rodents and humans may result in an increased amino acid repeat prevalence in the human lineage.

Dissecting the role of low-complexity regions in the evolution of vertebrate proteins

Low-complexity regions (LCRs) in proteins are tracts that are highly enriched in one or a few aminoacids. Given their high abundance, and their capacity to expand in relatively short periods of time through replication slippage, they can greatly contribute to increase protein sequence space and generate novel protein functions. However, little is known about the global impact of LCRs on protein evolution. We have traced back the evolutionary history of 2,802 LCRs from a large set of homologous protein families from H.sapiens, M.musculus, G.gallus, D.rerio and C.intestinalis. Transcriptional factors and other regulatory functions are overrepresented in proteins containing LCRs. We have found that the gain of novel LCRs is frequently associated with repeat expansion whereas the loss of LCRs is more often due to accumulation of amino acid substitutions as opposed to deletions. This dichotomy results in net protein sequence gain over time. We have detected a significant increase in the rate of accumulation of novel LCRs in the ancestral Amniota and mammalian branches, and a reduction in the chicken branch. Alanine and/or glycine-rich LCRs are overrepresented in recently emerged LCR sets from all branches, suggesting that their expansion is better tolerated than for other LCR types. LCRs enriched in positively charged amino acids show the contrary pattern, indicating an important effect of purifying selection in their maintenance. We have performed the first large-scale study on the evolutionary dynamics of LCRs in protein families. The study has shown that the composition of an LCR is an important determinant of its evolutionary pattern.

Emergence of novel domains in proteins

Proteins are composed of a combination of discrete, well-defined, sequence domains, associated with specific functions that have arisen at different times during evolutionary history. The emergence of novel domains is related to protein functional diversification and adaptation. But currently little is known about how novel domains arise and how they subsequently evolve. To gain insights into the impact of recently emerged domains in protein evolution we have identified all human young protein domains that have emerged in approximately the past 550 million years. We have classified them into vertebrate-specific and mammalian-specific groups, and compared them to older domains. We have found 426 different annotated young domains, totalling 995 domain occurrences, which represent about 12.3% of all human domains. We have observed that 61.3% of them arose in newly formed genes, while the remaining 38.7% are found combined with older domains, and have very likely emerged in the context of a previously existing protein. Young domains are preferentially located at the N-terminus of the protein, indicating that, at least in vertebrates, novel functional sequences often emerge there. Furthermore, young domains show significantly higher non-synonymous to synonymous substitution rates than older domains using human and mouse orthologous sequence comparisons. This is also true when we compare young and old domains located in the same protein, suggesting that recently arisen domains tend to evolve in a less constrained manner than older domains. We conclude that proteins tend to gain domains over time, becoming progressively longer. We show that many proteins are made of domains of different age, and that the fastest evolving parts correspond to the domains that have been acquired more recently.

Disseny d'una cambra frigorífica al municipi de Seròs

El present projecte tracta del disseny, per a la posterior construcció, d'una cambra frigorífica destinada al refredament de la fruita recent recol·lectada. El principal objectiu d'aquesta cambra es poder conservar la fruita freda durant posc dies per poder-la distribuir arreu d'Espanya quan convingui, tot i que també té com a avantatge que el propietari pot recol·lectar els fruits durant els dies festius i guardar-los en bones condicions tèrmiques.

80 casos de Derecho de daños (2004-2008)

InDret presenta, por quinto año consecutivo, una selección de cuarenta sentencias sobre responsabilidad civil dictadas por el Tribunal Supremo que tratan cuestiones centrales del derecho de daños. El lector también encontrará en este trabajo las selecciones de 2004, 2005, 2006 y 2007 publicadas en números anteriores.