Poden ser els pactes successoris un instrument al servei de la continuïtat de l'Empresa Familiar?

En aquest treball es pretén indicar l'existència d'alguns instruments, com són els Pactes Successoris, en aquest cas a Catalunya, que poden ser utilitzats per proporcionar un plus d'estabilitat a un dels reptes fonamentals de les EF, la successió. També es posa l'accent en la introducció de la poda de l'arbre familiar com una opció poc a tenir en compte en la dinàmica pròpia de l'Empresa Familiar.

The UlaG protein familly defines novel structural and functional motifs grafted on an ancient RNase fold

Background: Bacterial populations are highly successful at colonizing new habitats and adapting to changing environmental conditions, partly due to their capacity to evolve novel virulence and metabolic pathways in response to stress conditions and to shuffle them by horizontal gene transfer (HGT). A common theme in the evolution of new functions consists of gene duplication followed by functional divergence. UlaG, a unique manganese-dependent metallo-b-lactamase (MBL) enzyme involved in L-ascorbate metabolism by commensal and symbiotic enterobacteria, provides a model for the study of the emergence of new catalytic activities from the modification of an ancient fold. Furthermore, UlaG is the founding member of the so-called UlaG-like (UlaGL) protein family, a recently established and poorly characterized family comprising divalent (and perhaps trivalent)metal-binding MBLs that catalyze transformations on phosphorylated sugars and nucleotides. Results: Here we combined protein structure-guided and sequence-only molecular phylogenetic analyses to dissect the molecular evolution of UlaG and to study its phylogenomic distribution, its relatedness with present-day UlaGL protein sequences and functional conservation. Phylogenetic analyses indicate that UlaGL sequences are present in Bacteria and Archaea, with bona fide orthologs found mainly in mammalian and plant-associated Gramnegative and Gram-positive bacteria. The incongruence between the UlaGL tree and known species trees indicates exchange by HGT and suggests that the UlaGL-encoding genes provided a growth advantage under changing conditions. Our search for more distantly related protein sequences aided by structural homology has uncovered that UlaGL sequences have a common evolutionary origin with present-day RNA processing and metabolizing MBL enzymes widespread in Bacteria, Archaea, and Eukarya. This observation suggests an ancient origin for the UlaGL family within the broader trunk of the MBL superfamily by duplication, neofunctionalization and fixation. Conclusions: Our results suggest that the forerunner of UlaG was present as an RNA metabolizing enzyme in the last common ancestor, and that the modern descendants of that ancestral gene have a wide phylogenetic distribution and functional roles. We propose that the UlaGL family evolved new metabolic roles among bacterial and possibly archeal phyla in the setting of a close association with metazoans, such as in the mammalian gastrointestinal tract or in animal and plant pathogens, as well as in environmental settings. Accordingly, the major evolutionary forces shaping the UlaGL family include vertical inheritance and lineage-specific duplication and acquisition of novel metabolic functions, followed by HGT and numerous lineage-specific gene loss events.

Descabdellant les arrels de l'evolució

Una de les teories més apassionants i alhora més controvertides dels darrers temps és, sens dubte, la de l'evolució. Segur que tothom ha observat algun arbre evolutiu -o filogenètic-, on a partir d'un tronc comú, el que marca l'origen únic de la vida a la terra, es van ramificant els diversos llinatges d'éssers vius, agrupats en funció del seu parentesc, és a dir, del temps que fa que va viure el seu darrer avantpassat comú.

Functional and evolutionary analysis of DXL1, a non-essential gene encoding a 1-deoxy-D-xylulose 5-phosphate synthase like protein in Arabidopsis thaliana

The synthesis of 1-deoxy-D-xylulose 5-phosphate (DXP), catalyzed by the enzyme DXP synthase (DXS), represents a key regulatory step of the 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway for isoprenoid biosynthesis. In plants DXS is encoded by small multigene families that can be classified into, at least, three specialized subfamilies. Arabidopsis thaliana contains three genes encoding proteins with similarity to DXS, including the well-known DXS1/CLA1 gene, which clusters within subfamily I. The remaining proteins, initially named DXS2 and DXS3, have not yet been characterized. Here we report the expression and functional analysis of A. thaliana DXS2. Unexpectedly, the expression of DXS2 failed to rescue Escherichia coli and A. thaliana mutants defective in DXS activity. Coherently, we found that DXS activity was negligible in vitro, being renamed as DXL1 following recent nomenclature recommendation. DXL1 is targeted to plastids as DXS1, but shows a distinct expression pattern. The phenotypic analysis of a DXL1 defective mutant revealed that the function of the encoded protein is not essential for growth and development. Evolutionary analyses indicated that DXL1 emerged from DXS1 through a recent duplication apparently specific of the Brassicaceae lineage. Divergent selective constraints would have affected a significant fraction of sites after diversification of the paralogues. Furthermore, amino acids subjected to divergent selection and likely critical for functional divergence through the acquisition of a novel, although not yet known, biochemical function, were identified. Our results provide with the first evidences of functional specialization at both the regulatory and biochemical level within the plant DXS family.

Consequences of lineage-specific gene loss on functional evolution of surviving paralogs: ALDH1A and retinoic acid signaling in vertebrate genomes

Genome duplications increase genetic diversity and may facilitate the evolution of gene subfunctions. Little attention, however, has focused on the evolutionary impact of lineage-specific gene loss. Here, we show that identifying lineage-specific gene loss after genome duplication is important for understanding the evolution of gene subfunctions in surviving paralogs and for improving functional connectivity among human and model organism genomes. We examine the general principles of gene loss following duplication, coupled with expression analysis of the retinaldehyde dehydrogenase Aldh1a gene family during retinoic acid signaling in eye development as a case study. Humans have three ALDH1A genes, but teleosts have just one or two. We used comparative genomics and conserved syntenies to identify loss of ohnologs (paralogs derived from genome duplication) and to clarify uncertain phylogenies. Analysis showed that Aldh1a1 and Aldh1a2 form a clade that is sister to Aldh1a3-related genes. Genome comparisons showed secondarily loss of aldh1a1 in teleosts, revealing that Aldh1a1 is not a tetrapod innovation and that aldh1a3 was recently lost in medaka, making it the first known vertebrate with a single aldh1a gene. Interestingly, results revealed asymmetric distribution of surviving ohnologs between co-orthologous teleost chromosome segments, suggesting that local genome architecture can influence ohnolog survival. We propose a model that reconstructs the chromosomal history of the Aldh1a family in the ancestral vertebrate genome, coupled with the evolution of gene functions in surviving Aldh1a ohnologs after R1, R2, and R3 genome duplications. Results provide evidence for early subfunctionalization and late subfunction-partitioning and suggest a mechanistic model based on altered regulation leading to heterochronic gene expression to explain the acquisition or modification of subfunctions by surviving ohnologs that preserve unaltered ancestral developmental programs in the face of gene loss.

Notes breus (flora). Amorpha fruticosa L. (Papilionaceae) al Baix Empordà = Amorpha fruticosa L. (Papilionaceae) in the Baix Empordà (NE Catalonia)

Nota breu de flora sobre la presència d’un arbre caducifoli originari del centre i de l’est d’Amèrica del Nord que s’ha trobat naturalitzat a la desembocadura del rec del Molí de Pals

Optimització de diagnòstics mitjançant arbres de classificació

El projecte que es desenvolupa té per objectiu optimitzar el procediment que utilitzen els professionals mèdics per a elaborar el diagnòstic de les patologies que pateixen els pacients. Els criteris que s'optimitzen són variables, com ara minimitzar el cost de les exploracions necessàries i maximitzar l'eficiència, sempre a partir dels símptomes que acusi el pacient. Com a estratègia per a resoldre aquest problema s'utilitzen els arbres de classificació.

Maneig de les dades d'un escàner làser (LiDAR) per a l'obtenció de paràmetres vegetatius en fruiters (perera) i vinya

Aquest projecte té com a finalitat desenvolupar un sistema no destructiu per a la caracterització de les plantacions de vinya i d’arbres fruiters mitjançant la utilització d’un sensor làser (LiDAR - Light Detection and Ranging). La informació obtinguda ha de permetre estudiar la resposta del cultiu a determinades accions (poda, reg, adobs, etc.); i també realitzar tractaments fitosanitaris adaptats a la densitat foliar del cultiu. La posada a punt del sistema (software i hardware) es va realitzar a escala reduïda mitjançant proves de laboratori sobre un arbre ornamental. Obtenint la configuració del sensor LiDAR més adequada i la calibració de tot el sistema. L’any 2004 van realitzar assajos en plantacions de pomera, perera, cítrics i vinya. L’objectiu era posar a prova el sistema i obtenir dades dels cultius. Amb la introducció de canvis i millores en el sistema i en la metodologia de treball, l’any 2005 es van realitzar nous assajos, però només en perera Blanquilla i en vinya Merlot. En tots els assajos s’escanejaven unes franges de vegetació concretes i posteriorment es desfullaven manualment per a calcular-ne l’Índex d’Àrea Foliar (IAF). Les dades obtingudes amb el sensor LiDAR s’han analitzat mitjançant l’aplicació de la metodologia desenvolupada per Walklate et al.(2002) i s’han obtingut determinats paràmetres vegetatius de cultiu, que posteriorment s’han correlacionat amb l’Índex d’Àrea Foliar (IAF) obtingut de forma experimental. La capacitat de predicció de l’Índex d’Àrea Foliar (IAF) per part dels diferents paràmetres calculats es diferent en cada cultiu, essent necessàries més proves i major nombre de dades a fi d’obtenir un model fiable per a l’estimació de l’IAF a partir de les lectures del sensor LiDAR. L’estudi de la variabilitat de la vegetació mitjançant l’anàlisi de la variabilitat del Tree Area Index (TAI) al llarg de la fila ha permès determinar el nombre mínim necessari d’escanejades acumulades per a l’estimació fiable de l’Índex d’Àrea Foliar. Finalment s’ha estudiat la incidència de l’alçada de col•locació del sensor LiDAR respecte la vegetació.

Web services to link interlibrary software with OCLC WorldShare

Purpose - This article describes the use of web services to interconnect the GTBib interlibrary loan program with the OCLC WorldShare platform. Design/methodology/approach - We describe the current problem of duplication of procedures in libraries that have added their collections to the OCLC WorldCat catalogue in recent years and are therefore more likely to receive interlibrary loan requests through the WorldShare Platform. Findings - A solution that uses web services to insert and retrieve requests between the two systems is presented. Autonomous agents periodically check the status of the requests and keep them updated and synchronized. These agents also inform the library staff of any variation or inconsistency that is detected. Practical Implications - This technology reduces process management time by making it unnecessary to introduce the request data in both systems. Agents are used to check the consistency of statuses between the two systems, thus avoiding errors and omissions and improving the efficiency of the whole interlibrary loan process. Originality/value - This paper describes in detail the technical aspects of the solution as a reference for the development of future applications.

Fills de l'atzar

Des de temps immemorials, totes les cultures humanes han atorgat un estatus especial als humans. Alguna cosa d'especial tenim: som l'única espècie animal viva que ha generat una cultura capaç de plantejar-se el seu origen i, encara més abstracte, el seu destí tant individual com col·lectiu. Aquest fet ha quedat reflectit en les llegendes, els mites i les pràctiques religioses, i àdhuc en els tractats científics. Fills de Déu o al capdamunt de l'arbre evolutiu; tant se val la formulació concreta que en fem, la idea socialment més estesa és que som la culminació d'un procés. L'evolució, però, no té cap direcció predeterminada [...].