Environmental impact assessment of energy crops cultivation in the Mediterranean Europe

Dissertação apresentada na Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa Para a obtenção do Grau de Mestre em Energia e Bioenergia

Les faunes de coraux (Anthozoaires Scléractiniaires) de la façade atlantique française au Chattien et au Miocène

The study of new abundant coral crops and a systematic revision of the historic collections allow us to extend significantly the data about the Upper Oligocene and Miocene Scleractinia of the French atlantic basins. The SW and W-NW France faunas have been considered, and complete lists of the different defined taxa are presented. The generallines of the evolution of this group are specified, and linked to the paleoclimatic and paleobiogeographic changes.

Etude de populations de Glycymeris (Bivalvia, Glycymerididae) du Miocène d'Aquitaine, Sud-Ouest de la France

Abundant crops of Glycymeris have been made in the neritic bioclastic deposits of the Aquitaine Basin. After an outline about the Chattian taxa, the 5 Lower Miocene lineages are presented; G. cor is plainly predominant. Then, the Middle Miocene faunas are also detaiIed, G. inflatus and G. bimaculatus being the most frequent taxa. A test of biometrical analysis about the G. cor species is presented.

Social network analysis applied to knowledge creation and transfer in the portuguese agricultural R&D field: an exploratory study

Paper presented at the 9th European Conference on Knowledge Management, Southampton Solent University, Southampton, UK, 4-5 Sep. 2008. URL: http://academic-conferences.org/eckm/eckm2008/eckm08-home.htm

Les faunes de coraux (Anthozoaires Scléractiniaires) de la façade atlantique française au Chattien et au Miocène

The study of new abundant coral crops and a systematic revision of the historie collections allow us to extend significantly the data about the Upper Oligocene and Miocene Scleractinia of the French atlantic basins. The SW and W-NW France faunas have been considered, and complete lists of the different defined taxa are presented. The general lines of the evolution of this group are specified, and linked to the paleoclimatic and paleobiogeographic changes.

Etude de populations de Glycymeris (Bivalvia, Glycymerididae) du Miocène d'Aquitaine, Sud-Ouest de la France Studyof Glycymeris (Bivalvia, G1ycymerididae) populations from the Aquitaine Miocene, SW France

Abundant crops of Glycymeris have been made in the neritic bioclastic deposits of the Aquitaine Basin. After an outline about the Chattian taxa, the 5 Lower Miocene lineages are presented; G. cor is plainly predominant. Then, the Middle Miocene faunas are also detaiIed, G. inflatus and G. bimaculatus being the most frequent taxa. A test of biometrical analysis about the G. cor species is presented.

Transformation of Medicago truncatula with the arginine decarboxylase gene to modify polyamine metabolism toward water deficit resistance

Dissertation submitted to obtain a Ph.D. (Doutoramento) degree in Biology at the Instituto de Tecnologia Química e Biológica da Universidade Nova de Lisboa

Bioenergy competency centre: study of the bioenergy potencial in the centre region of Portugal.

Dissertação apresentada como requisito parcial para obtenção do grau de Mestre em Ciência e Sistemas de Informação Geográfica

Biochemistry of grape berries: post-genomics approaches to uncover the effects of water deficits on ripening

Dissertation presented to obtain the Ph.D degree in Biochemistry, Plant Physiology

New strategies to detect and understand genotype-by-environment interactions and QTL-by-environment interactions

Dissertação para obtenção do Grau de Doutor em Estatística e Gestão do Risco, especialidade em Estatística

Spatial analysis and investigation of fire events occurrences in the Valencian Community, Spain

Dissertation submitted in partial fulfillment of the requirements for the Degree of Master of Science in Geospatial Technologies.

Differential exploitation of cashew - a low conflict crop - by sympatric humans and chimpanzees

Modification of natural areas by human activities mostly has a negative impact on wildlife by increasing the geographical and ecological overlap between people and animals. This can result in escalating levels of competition and conflict between humans and wildlife, for example over crops. However, data on specific crops and crop parts that are unattractive to wildlife yet important for human livelihoods are surprisingly scarce, especially considering their potential application to reducing crop damage by wildlife. Here we examine the co-utilization of a nationally important and spatially abundant cash crop, cashew Anacardium occidentalis, by people and chimpanzees Pan troglodytes verus inhabiting a forested–agricultural matrix in Cantanhez National Park in Guinea-Bissau. In this Park people predominantly harvest the marketable cashew nut and discard the unprofitable fruit whereas chimpanzees only consume the fruit. Local farmers generally perceive a benefit of raiding by chimpanzees as they reportedly pile the nuts, making harvesting easier. By ensuring that conflict levels over crops, especially those with high economic importance, remain low, the costs of living in proximity to wildlife can potentially be reduced. Despite high levels of deforestation associated with cashew farming, these findings point to the importance of cashew as a low-conflict crop in this area.

Isolation and encapsulation of a natural colourant using green technologies

The use of natural pigments instead of synthetic colourants is receiving growing interest in the food industry. In this field, cactus pears (Opuntia spp.) have been identified to be a promising betalainic crops covering a wide coloured spectrum. The aim of this work was to develop adequate clean and mild methodologies for the isolation and encapsulation of betacyanins, from cactus pear fruits (Opuntia spp.). Firstly, two different emerging technologies, namely PLE (Pressurized Liquid Extraction) and HPCDAE (High Pressure Carbon Dioxide-Assisted Extraction), were exploited to isolation of betacyanins form cactus pear fruits. Different process conditions were tested for the maximum recovery of betacyanins. Results showed that highest extraction yields were achieved for HPCDAE and mass ratio of pressurized carbon dioxide vs. acidified water was the parameter that most affected the betacyanins extraction. At optimum conditions of HPCDAE, Opuntia spp. extract presented a total betacyanin content of 211 ± 10 mg/100 g whereas extracts obtained using conventional extraction, PLE in static and in dynamic mode presented a total betacyanin content of 85 ± 3, 191 ± 2 and 153 ± 5 mg/100 g, respectively. HPCDAE has proven to be a successful technology to extract betacyanins from Opuntia spp. fruits. Afterward, Supercritical Fluid Technology was exploited to develop lipidic particles of betalain-rich extract. A betacyanin-rich conventional extract was encapsulated by PGSS® (Particles from Gas Saturated Solutions) technique. Different process conditions were tested in order to model the encapsulation of betacyanins. The pressure had a negative effect on betacyanin encapsulation. Lower pressures leads to an increase in the betacyanin encapsulation. This effect was more pronounced at higher temperatures and lower equilibrium time. At these conditions, Opuntia spp. particles presented 64.4 ± 4.5 mg/100 g and high antioxidant capacity. When compared with the Opuntia spp. dried extract, lipidic particles contributed to a better homogenization of the pink colour after incorporation in ice cream.

Evaluation of drought tolerance in several genotypes of spelt (Triticum aestivum Var. Spelta)

Domestication of plants and plant breeding have dramatically eroded the allelic variations of crop species which led to an increasing susceptibility of crop plants to environmental stresses, diseases and pests. Drought is a major environmental stress factor that affects the growth and development of plants so the selection of tolerant genotypes becomes increasingly important with respect to the predicted effects of global warming. In this study, several genotypes of Spelt (Triticum aestivum var. spelta) were tested under low water supply in soil with the aim of to find Spelt genotypes more resistant than wheat to these conditions, and select them so that in future may be used to improve wheat crops. Morphological analyses were performed and mineral and enzymatic analyses and also dry matter production were calculated. Our results suggests that the genotypes Sp53, Sp96, Sp912, Sp757 and Sp804 are a potential ones to use in breeding programs to improve wheat production. Under drought, these genotypes had growth efficiency of 38%, 45%, 64%, 37%, and 31% respectively and also showed higher biomass than modern wheat and were also mineralogical richer. The genotypes Sp96 and Sp912 showed highest activity of all antioxidants enzymes tested. This work proves that Spelt is a good wheat to continue to study in order to improve wheat crops in dry areas and consequently increase the quality of life and health of the populations living in those areas.

Functional genomic analysis of heat stress in Vitis vinifera

Grapevine (Vitis vinifera) is one of most agro-economically important fruit crops worldwide, with a special relevance in Portugal where over 300 varieties are used for wine production. Due to global warming, temperature stress is currently a serious issue affecting crop production especially in temperate climates. Mobile genetic elements such as retrotransposons have been shown to be involved in environmental stress induced genetic and epigenetic modifications. In this study, sequences related to Grapevine Retrotransposon 1 (Gret1) were utilized to determine heat induced genomic and transcriptomic modifications in Touriga Nacional, a traditional Portuguese grapevine variety. For this purpose, growing canes were treated to 42 oC for four hours and leaf genomic DNA and RNA was utilized for various techniques to observe possible genomic alterations and variation in transcription levels of coding and non-coding sequences between non-treated plants and treated plants immediately after heat stress (HS-0 h) or after a 24 hour recovery period (HS-24 h). Heat stress was found to induce a significant decrease in Gret1 related sequences in HS-24 h leaves, indicating an effect of heat stress on genomic structure. In order to identify putative heat induced DNA modifications, genome wide approaches such as Amplified Fragment Length Polymorphism were utilized. This resulted in the identification of a polymorphic DNA fragment in HS-0 h and HS-24 h leaves whose sequence mapped to a genomic region flanking a house keeping gene (NADH) that is represented in multiple copies in the Vitis vinifera genome. Heat stress was also found to affect the transcript levels of various non-coding and gene coding sequences. Accordingly, quantitative real time PCR results established that Gret1 related sequences are up regulated immediately after heat stress whereas the level of transcript of genes involved in identification and repair of double strand breaks are significantly down regulated in HS-0 h plants. Taken together, the results of this work demonstrated heat stress affects both genomic integrity and transcription levels.