Modelo geométrico de correcção da medição de fluxo sanguíneo na angiografia PC por RM em MAV’s cerebrais

Dissertação apresentada na Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa para a obtenção do grau de Mestre em Engenharia Biomédica

Estudo dos rácios trapézio inferior/ trapézio superior e grande dentado/ trapézio superior, em exercícios com envolvimento das articulações escapulo-torácica e gleno-umeral : recurso à electromiografia de superfície

RESUMO: Introdução: A estabilidade dinâmica relativa ao complexo articular do ombro depende de uma interacção perfeita entre músculos da coifa dos rotadores e músculos escapulares, como o binómio rotador da escápula – trapézio superior e trapézio inferior e o grande dentado. A compreensão dessas sinergias musculares em sujeitos assintomáticos permite, em última instância, o desenvolvimento de linhas orientadoras de raciocínio na abordagem clínica. Objectivo: Estudar o rácio de activação entre os músculos trapézio inferior e trapézio superior e entre grande dentado e trapézio superior, através de um conjunto de cinco exercícios aplicados a uma amostra de sujeitos assintomáticos, estabelecendo uma hierarquia entre esses rácios. Metodologia: Trata-se de um estudo descritivo, com uma amostra de 15 sujeitos saudáveis (n=9 homens; n=6 mulheres), com idades compreendidas entre os 19 e 27 anos (média=21 anos, dp=2,24), tendo sido avaliados por um sistema de electromiografia de superfície, em dois momentos de recolha diferentes. Os exercícios foram realizados em cadeia cinética aberta, sem qualquer aplicação de resistências externas. Resultados: De entre os exercícios analisados com envolvimento escapulo-torácico e gleno-umeral simultaneamente, destacaram-se com melhor rácio trapézio inferior/trapézio superior e grande dentado/trapézio superior (activação dos músculos trapézio inferior e grande dentado superior à activação do trapézio superior) os movimentos de flexão do ombro até aos 90º no plano sagital e a abdução do ombro até aos 90º no plano da escápula, considerando ambas as recolhas. Nos exercícios apenas com envolvimento escapulotorácico, destacaram-se com melhor rácio os movimentos de adução e depressão das escápulas bilateralmente com os membros superiores em repouso, seguido da abdução da escápula, com o ombro a 90º de flexão e mantendo a escápula em depressão (“murro à frente”), em ambas as recolhas. O exercício de abdução do ombro até aos 90º no plano frontal obteve sempre o pior rácio muscular, nos dois momentos de recolha. Conclusões: O presente trabalho estudou as interacções dos músculos escapulotorácicos em cinco exercícios realizados até aos 90º de elevação do membro superior,em cadeia cinética aberta e sem recurso a resistências externas. Será, eventualmente possível, enquadrar os exercícios propostos nas fases de consciencialização e associação de reaprendizagem motora. Sugerem-se futuros estudos com uso de análise cinemática. --------------------ABSTRACT: Introduction: Stability of the shoulder and scapula depend upon a perfect interaction between rotator cuff of the shoulder and scapular muscles, such as upper and lower trapezius and serratus anterior. A deeper comprehension of these synergies in healthy subjects allows, ultimately, the development of a better reasoning in the clinical approach. Goal: To study the ratios between lower trapezius/ upper trapezius and between serratus anterior/ upper trapezius in five different exercises, applied to healthy subjects, presenting a hierarchy between ratios. Methods: It’s an observational descriptive study including 15 healthy subjects (n= 9 men; n=6 women) with ages between 19 and 27 years (mean of 21 years, SD of 2,24). Surface electromyography was used in two different recording moments. All the exercises were performed in open kinetic chain, without external resistance. Results: Of the exercises studied that involved the shoulder and scapula together, the best ratios between lower trapezius/upper trapezius and serratus anterior/ upper trapezius (greater activity for lower trapezius and serratus anterior and less for upper trapezius) were found in shoulder flexion to 90º and in shoulder abduction to 90º in the plane of the scapula, in both recording moments. Considering the exercises that included only the scapula, the best ratio were found in bilateral adduction and depression of the scapula with the upper limbs resting and in abduction of the scapula, while being in depression, with the shoulder flexed at 90º, considering both recordings. Shoulder abduction to 90º in the coronal plane presented the worse ratio in both recording moments. Conclusions: This present paper studied the interaction of the scapula upward rotator muscles in five exercises performed below 90º of shoulder flexion or abduction, in open kinetic chain, with no external resistance. It may be possible to associate our exercises with the motor learning phases of association and consciousness. Future studies are suggested with kinematic analysis.

2D position system for a mobile robot in unstructured environments

Nowadays, several sensors and mechanisms are available to estimate a mobile robot trajectory and location with respect to its surroundings. Usually absolute positioning mechanisms are the most accurate, but they also are the most expensive ones, and require pre installed equipment in the environment. Therefore, a system capable of measuring its motion and location within the environment (relative positioning) has been a research goal since the beginning of autonomous vehicles. With the increasing of the computational performance, computer vision has become faster and, therefore, became possible to incorporate it in a mobile robot. In visual odometry feature based approaches, the model estimation requires absence of feature association outliers for an accurate motion. Outliers rejection is a delicate process considering there is always a trade-off between speed and reliability of the system. This dissertation proposes an indoor 2D position system using Visual Odometry. The mobile robot has a camera pointed to the ceiling, for image analysis. As requirements, the ceiling and the oor (where the robot moves) must be planes. In the literature, RANSAC is a widely used method for outlier rejection. However, it might be slow in critical circumstances. Therefore, it is proposed a new algorithm that accelerates RANSAC, maintaining its reliability. The algorithm, called FMBF, consists on comparing image texture patterns between pictures, preserving the most similar ones. There are several types of comparisons, with different computational cost and reliability. FMBF manages those comparisons in order to optimize the trade-off between speed and reliability.

Follow the red road of triheme cytochromes in Geobacter sulfurreducens

The bacterium Geobacter sulfurreducens (Gs) is capable of oxidizing a large variety of compounds relaying electrons out of the cytoplasm and across the membrane in a process designated as extracellular electron transfer. The Gs genome was fully sequenced and a family composed by five periplasmic triheme cytochromes c7 (designated PpcA-E) was identified. These cytochromes play an important role in the reduction of extracellular acceptors. They contain approximately 70 amino acids, three heme groups with bis-histidinyl axial coordination, and share between 57 and 77% sequence identity. The triheme cytochrome PpcA is highly abundant in Gs and is most likely the reservoir of electrons destined for outer surface. In addition to its role in electron transfer pathways this protein can perform e-/H+ energy transduction, a process that is disrupted when the strictly conserved aromatic residue phenylalanine 15 is replaced by a leucine (PpcAF15L). This Thesis focuses on the expression, purification and characterization of these proteins using Nuclear Magnetic Resonance and ultraviolet-visible spectroscopy. The orientations of the heme axial histidine ring planes and the orientation of the heme magnetic axis were determined for each Gs triheme cytochrome. The comparison of the orientations obtained in solution with the crystal structures available showed significant differences. The results obtained provide the paramagnetic constraints to include in the future refinement of the solution structure in the oxidized state. In this work was also determined the solution structure and the pH-dependent conformational changes of the PpcAF15L allowing infer the structural origin for e-/H+ energy transduction mechanism as shown by PpcA. Finally, the backbone and side chain NH signals of PpcA were used to map interactions between this protein and the putative redox partner 9,10-anthraquinone-2,6-disulfonate (AQDS). In this work a molecular interaction was identified for the first time between PpcA and AQDS, constituting the first step toward the rationalization of the Gs respiratory chain.

Mechanical characterization of aortas using 2D ultrasound elastography

Rupture of aortic aneurysms (AA) is a major cause of death in the Western world. Currently, clinical decision upon surgical intervention is based on the diameter of the aneurysm. However, this method is not fully adequate. Noninvasive assessment of the elastic properties of the arterial wall can be a better predictor for AA growth and rupture risk. The purpose of this study is to estimate mechanical properties of the aortic wall using in vitro inflation testing and 2D ultrasound (US) elastography, and investigate the performance of the proposed methodology for physiological conditions. Two different inflation experiments were performed on twelve porcine aortas: 1) a static experiment for a large pressure range (0 – 140 mmHg); 2) a dynamic experiment closely mimicking the in vivo hemodynamics at physiological pressures (70 – 130 mmHg). 2D raw radiofrequency (RF) US datasets were acquired for one longitudinal and two cross-sectional imaging planes, for both experiments. The RF-data were manually segmented and a 2D vessel wall displacement tracking algorithm was applied to obtain the aortic diameter–time behavior. The shear modulus G was estimated assuming a Neo-Hookean material model. In addition, an incremental study based on the static data was performed to: 1) investigate the changes in G for increasing mean arterial pressure (MAP), for a certain pressure difference (30, 40, 50 and 60 mmHg); 2) compare the results with those from the dynamic experiment, for the same pressure range. The resulting shear modulus G was 94 ± 16 kPa for the static experiment, which is in agreement with literature. A linear dependency on MAP was found for G, yet the effect of the pressure difference was negligible. The dynamic data revealed a G of 250 ± 20 kPa. For the same pressure range, the incremental shear modulus (Ginc) was 240 ± 39 kPa, which is in agreement with the former. In general, for all experiments, no significant differences in the values of G were found between different image planes. This study shows that 2D US elastography of aortas during inflation testing is feasible under controlled and physiological circumstances. In future studies, the in vivo, dynamic experiment should be repeated for a range of MAPs and pathological vessels should be examined. Furthermore, the use of more complex material models needs to be considered to describe the non-linear behavior of the vascular tissue.

Avaliação da resistência à fadiga de instrumentos endodônticos sujeitos a polimento electrolítico e a tratamento térmico específico

Esta dissertação teve como principais objectivos determinar a resistência à fadiga de instrumentos endodônticos de Níquel-Titânio sujeitos a polimento electrolítico e tratamento térmicopor autoclave, assim como estudar o comportamento estrutural dos instrumentos, através de análise numérica pelo método dos elementos finitos, quando sujeitos à curvatura em três regiões distintas. Vinte e dois instrumentos Hyflex (Coltene, Switzerland), com dois tamanhos diferentes (.04/20 e .06/20), foram divididos em 3 grupos: Grupo I, 4 instrumentos (dois de cada tamanho) sem qualquer tipo de tratamento térmico ou superficial; Grupo II, 12 instrumentos (seis de cada tamanho) submetidos a polimento electrolítico; Grupo III, 6 instrumentos (três de cada tamanho) submetidos a polimento electrolítico e tratamento térmico por autoclave. Todos os instrumentos foram sujeitos a testes de fadiga por flexão rotativa. Os instrumentos foram polidos, aplicando uma potência de 30 V, durante 3 segundos, a uma taxa de escoamento da solução electrolítica igual a 1. O tratamento térmico em autoclave foi realizado a uma temperatura e pressão de 134ºC e 2,16 bar, respectivamente, durante 30 minutos. O raio e ângulo de curvatura impostos durante os ensaios experimentais foram de 4,7 mm e 45º, respectivamente. A velocidade de rotação utilizada para testar os instrumentos foi de 500 rpm. O tempo até à fractura foi registado e o número de ciclos à fractura foi calculado. Calculou-se a área circular equivalente do instrumento Hyflex .06/20, em 3 regiões diferentes do mesmo (apical, central e coronal), na secção do instrumento correspondente a metade do comprimento do arco imposto pela curvatura do canal. Os valores de extensão teóricos foram calculados com o objectivo de comparar com a distribuição de tensão e extensão obtida pelo método dos elementos finitos. Os valores calculados analiticamente estão coerentes com os valores obtidos pelo método dos elementos finitos. Existe um grande risco de fractura do instrumento durante o tratamento endodôntico de canais radiculares que imponham curvaturas coronais aos instrumentos. Analisando os resultados obtidos experimentalmente, verifica-se que existem diferenças significativas, na duração e no número de ciclos à fadiga, entre os instrumentos polidos e não polidos e entre os instrumentos com e sem tratamento térmico por autoclave. Conclui-se que o polimento electrolítico tem uma influência significativa na vida à fadiga dos instrumentos Hyflex .04/20 e .06/20. O tratamento térmico por autoclave tem uma influência negativa nos instrumentos Hyflex .04/20 e uma influência positiva nos instrumentos Hyflex .06/20.