Electrical characterization and modification of low dimensional oxide semiconductors for sensor applications

This work reviews the recent research on ion and UV irradiation of β-

Sol-gel entrapped biosystems: enzyme(s) and whole cells

In this work two different procedures to utilize the sol-gel technology were applied to immobilize/encapsulate enzymes and living cells. CO2 has reached levels in the atmosphere that make it a pollutant. New methods to utilize this gas to obtain products of added value can be very important, both from an environmentally point of view and from an economic standpoint. The first goal of this work was to study the first reaction of a sequential, three-step, enzymatic process that carries out the conversion of CO2 to methanol. Of the three oxidoreductases involved, our focus was on formate dehydrogenase (FateDH) that converts CO2 to formate. This reaction requires the presence of the cofactor β-nicotinamide adenine dinucleotide in reduced form (NADH). The cofactor is expensive and unstable. Our experiments were directed towards generating NADH from its oxidized form (NAD+), using glutamate dehydrogenase (GDH). The formation of NADH from NAD+ in aqueous medium was studied with both free and sol-gel entrapped GDH. This reaction was then followed by the conversion of CO2 to formate, catalysed by free or sol-gel entrapped FateDH. The quantification of NADH/NAD+ was made using UV/Vis spectroscopy. Our results showed that it was possible to couple the GDH-catalyzed generation of the cofactor NADH with the FateDH-catalyzed conversion of CO2, as confirmed by the detection of formate in the medium, using High Performance Liquid Chromatography (HPLC). The immobilization of living cells can be advantageous from the standpoint of ease of recovery, reutilization and physical separation from the medium. Also dead cells may not always exhibit enzymatic activities found with living cells. In this work cell encapsulation was performed using Escherichia coli bacteria. To reduce toxicity for living organisms, the sol-gel method was different than for enzymes, and involved the use of aqueous-based precursors. Initial encapsulation experiments and viability tests were carried out with E. coli K12. Our results showed that sol-gel entrapment of the cells was achieved, and that cell viability could be increased with additives, namely betaine that led to greater viability improvement and was selected for further studies. For an approach to “in-cell” Nuclear Magnetic Resonance (NMR) experiments, the expression of the protein ctCBM11 was performed in E. coli BL21. It was possible to obtain an NMR signal from the entrapped cells, a considerable proportion of which remained alive after the NMR experiments. However, it was not possible to obtain a distinctive NMR signal from the target protein to distinguish it from the other proteins in the cell.

Mechanisms underlying intracellular delivery

AuNPs are versatile systems used for different biomedical application including imaging, drug and gene delivery. These systems support the intracellular transport of active molecules, a step that is considered one of the crucial problems in drug delivery. Nevertheless, in order to design optimal multifunctional AuNPs for specific and efficient nanomedicine applications, the mechanism by which AuNPs interact with living cells must be fully understand. The main goal of this work consisted in the assessment of the cellular uptake mechanism of 14 nm spherical AuNPs by A549 cells, through fluorescent spectroscopy and microscopy, in combination with quantitative analysis by ICP-MS. TAMRA labeled AuNPs were characterized by UV-visible and fluorescent spectroscopy and the final hydrodynamic diameter of 22.5 ± 0.33 nm was obtained by DLS. Regarding the cellular uptake studies, the AuNPs presented a fast cellular uptake kinetics reaching a saturation point after 6 hours of incubation in A549 cells. Further investigation concerning the internalization mechanism of this AuNPs was evaluated using specific inhibitors for different endocytic pathways. Optimal inhibition was achieved using chlorpromazine, inhibitor of clathrin-mediated endocytosis, resulting in a 23.5 % inhibition of AuNPs after 1 hour of incubation. This preliminary result obtained by fluorescent spectroscopy suggests that these AuNPs were predominantly uptake by clathrin-mediated endocytosis, meaning that other endocytic pathways must be involved in the cellular uptake of this AuNPs. In what cell viability is concern, the prepared AuNPs and the endocytic inhibitors revealed no significant effect on the cell viability in A549 cell line.

Análise de risco aplicada à coleção de pintura a óleo da “Casa dos Patudos”

Este trabalho teve como principais objetivos a avaliação de risco para a coleção de pinturas a óleo da “Casa dos Patudos” e a proposta de estratégias para mitigar esses riscos. Escolheu-se o modelo de análise de risco Cultural Property Risk Analysis Model ou Modelo de Análise de Risco para Património Cultural, desenvolvido por Robert Waller (2003), por permitir hierarquizar os riscos a que a coleção está sujeita e por já ter sido aplicado com sucesso noutras coleções. Neste trabalho o modelo CPRAM é aplicado pela primeira vez a uma coleção de pintura a óleo em exibição. A metodologia utilizada passou pela caracterização da coleção, o diagnóstico das obras, inspeções ao edifício, conversas informais com os vários funcionários, colocação de armadilhas e determinação das condições ambientais. Verificou-se que os principais agentes de deterioração a que a coleção está exposta estão relacionados com as elevadas flutuações de humidade relativa, forças físicas, a excessiva exposição à luz e a ocorrência de pragas de insetos xilófagos. Desse modo, algumas das soluções propostas passam pela implementação de uma política de controlo integrado de pragas, colocação de filtros UV nas janelas e claraboias e controlo da humidade relativa e temperatura. As vantagens e desvantagens da aplicação deste modelo a esta coleção são aqui discutidos. Um dos desafios deste estudo passou por encontrar um equilíbrio entre o que são as condições ideais de preservação e o que é possível implementar numa casa histórica, ou seja, um local que não foi originalmente concebido para as funções que desempenha atualmente. Neste caso, a estas restrições, adiciona-se ainda as imposições deixadas em testamento pelo proprietário da casa. Embora o trabalho seja aplicado a uma coleção específica, existem muitas outras instituições, com coleções e situações semelhantes, que certamente partilham do mesmo tipo de problemas. Deste modo, espera-se que este trabalho também contribua para a chamada de atenção e melhoramento dos riscos a que essas coleções se encontram expostas.

Propriedades antioxidantes e compostos bioactivos em vinhos portugueses monocasta

Tem sido atribuída ao vinho a designação de alimento antioxidante, devido ao seu alto teor em compostos polifenólicos, pelo que o seu consumo moderado pode apresentar efeitos benéficos para a saúde do consumidor. Neste trabalho foram estudados 228 vinhos portugueses monocastas (190 tintos, 30 brancos e 8 rosés), produzidos em 8 regiões do país, (Alentejo, Algarve, Península de Setúbal, Lisboa, Tejo, Verdes, Dão e Trás-os-Montes e Alto Douro) a partir de 12 castas tintas (Alfrocheiro, Alicante Bouschet, Aragonez-Tinta Roriz, Cabernet Sauvignon, Castelão, Merlot, Petit Verdot, Syrah, Tinta Miúda, Touriga Nacional, Trincadeira e Vinhão) e 6 castas brancas (Antão Vaz, Arinto, Chardonnay, Fernão Pires, Malvasia Fina e Verdelho). Estes vinhos foram avaliados quanto à sua composição fenólica por HPLC-DAD, propriedades antioxidantes (reacção de Folin-Ciocalteu, poder de redução férrica, FRAP e capacidade de sequestração do radical DPPH) e foram caracterizados por UV-VIS. Observaram-se correlações fortes entre as actividades antioxidantes dos vinhos e as suas características cromáticas, nomeadamente as suas absorvâncias a 420, 520 e 620 nm, mas também com as absorvâncias a 280 nm, 320 nm ou 360 nm que correspondem a compostos fenólicos não corados. As castas Alicante Bouschet e Petit Verdot destacaram-se quanto às suas propriedades antioxidantes, enquanto as regiões da Península de Setúbal e do Dão revelaram ter características que favorecem a actividade antioxidante dos vinhos nelas produzidos, por comparação com vinhos das mesmas castas produzidos noutras regiões. A análise de HPLC permitiu detectar 52 compostos fenólicos (17 ácidos hidroxibenzóicos ou derivados, 8 flavanóis ou procianidinas, 12 ácidos hidroxicinâmicos e 7 flavonóis) presentes na maior parte dos vinhos tintos analisados. Os resultados obtidos neste trabalho evidenciam a complexidade de factores que determinam as propriedades biológicas e composição fenólica dos vinhos tintos, rosés ou brancos, e que incluem casta, parâmetros edafo-climáticos e características do processo de vinificação.

Chlorite Dismutase from perchlorate reducing bacteria. A potential biocatalyst to eliminate chlorinated species from polluted water resources and industrial wastes

Magnetospirillum (M.) sp. strain Lusitani, a perchlorate reducing bacteria (PRB), was previously isolated from a wastewater treatment plant and phylogenetic analysis was performed to classify the isolate. The DNA sequence of the genes responsible for perchlorate reduction and chlorite dismutation was determined and a model was designed based on the physiological roles of the proteins involved in the pcr-cld regulon. Chlorite dismutase (Cld) was purified from Magnetospirillum sp. strain Lusitani cells grown in anaerobiosis in the presence of perchlorate. The protein was purified up to electrophoretic grade using HPLC techniques as a 140 kDa homopentamer comprising five ~28 kDa monomers. Steady-state kinetic studies showed that the enzyme follows a Michaelis-Menten model with optimal pH and temperature of 6.0 and 5°C, respectively. The average values for the kinetic constants KM and Vmax were respectively 0.56 mM and 10.2 U, which correspond to a specific activity of 35470 U/mg and a turnover number of 16552 s-1. Cld from M. sp. strain Lusitani is inhibited by the product chloride, but not by dioxygen. Inhibition constants KiC= 460 mM and KiU= 480 mM indicated that sodium chloride is a weak mixed inhibitor of Cld, with a slightly stronger competitive character. The X-ray crystallography structure of M. sp. strain Lusitani Cld was solved at 3.0 Å resolution. In agreement with cofactor content biochemical analysis, the X-ray data showed that each Cld monomer harbors one heme b coordinated by a histidine residue (His188), hydrogen-bonded to a conserved glutamic acid residue (Glu238). The conserved neighboring arginine residue (Arg201) important for substrate positioning, was found in two different conformations in different monomers depending on the presence of the exogenous ligand thiocyanate. UV-Visible and CW-EPR spectroscopies were used to study the effect of redox agents, pH and exogenous ligands on the heme environment.