25 resultados para Overlapping consensus
em Repositório Científico do Instituto Politécnico de Lisboa - Portugal
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Dissertação apresentada na Escola Superior de Educação de Lisboa para obtenção do grau de Mestre em Educação Matemática na Educação Pré-escolar e no 1º e 2º ciclos do Ensino Básico
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Biosignals analysis has become widespread, upstaging their typical use in clinical settings. Electrocardiography (ECG) plays a central role in patient monitoring as a diagnosis tool in today's medicine and as an emerging biometric trait. In this paper we adopt a consensus clustering approach for the unsupervised analysis of an ECG-based biometric records. This type of analysis highlights natural groups within the population under investigation, which can be correlated with ground truth information in order to gain more insights about the data. Preliminary results are promising, for meaningful clusters are extracted from the population under analysis. © 2014 EURASIP.
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Clustering ensemble methods produce a consensus partition of a set of data points by combining the results of a collection of base clustering algorithms. In the evidence accumulation clustering (EAC) paradigm, the clustering ensemble is transformed into a pairwise co-association matrix, thus avoiding the label correspondence problem, which is intrinsic to other clustering ensemble schemes. In this paper, we propose a consensus clustering approach based on the EAC paradigm, which is not limited to crisp partitions and fully exploits the nature of the co-association matrix. Our solution determines probabilistic assignments of data points to clusters by minimizing a Bregman divergence between the observed co-association frequencies and the corresponding co-occurrence probabilities expressed as functions of the unknown assignments. We additionally propose an optimization algorithm to find a solution under any double-convex Bregman divergence. Experiments on both synthetic and real benchmark data show the effectiveness of the proposed approach.
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The evolution of the topography of titanium surfaces treated with femtosecond laser radiation in stationary conditions as a function of radiation fluence and number of laser pulses is investigated. Depending on the processing parameters, ripples, microcolumns, wavy or smooth surfaces can be obtained. The ripples predominate for fluences near the damage threshold of titanium (0.2+/-0.1) J/cm(2), while microcolumns form during the first 200 pulses for fluences between (0.6+/-0.2) and (1.7+/-0.2) J/cm(2). A wavy topography develops for fluences and number of pulses higher than (1.7+/-0.2) J/cm(2) and 300, respectively. A bimodal surface topography consisting of surface ripples overlapping a microcolumnar topography can be obtained if the surfaces are firstly treated to create microcolumns followed by laser treatment with a lower fluence near the ablation threshold of the material, in order to generate periodic ripple
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New K/Ar dating and geochemical analyses have been carried out on the WNW-ESE elongated oceanic island of S. Jorge to reconstruct the volcanic evolution of a linear ridge developed close to the Azores triple junction. We show that S. Jorge sub-aerial construction encompasses the last 1.3 Myr, a time interval far much longer than previously reported. The early development of the ridge involved a sub-aerial building phase exposed in the southeast end of the island and now constrained between 1.32 +/- 0.02 and 1.21 +/- 0.02 Ma. Basic lavas from this older stage are alkaline and enriched in incompatible elements, reflecting partial melting of an enriched mantle source. At least three differentiation cycles from alkaline basalts to mugearites are documented within this stage. The successive episodes of magma rising, storage and evolution suggest an intermittent reopening of the magma feeding system, possibly due to recurrent tensional or trans-tensional tectonic events. Present data show a gap in sub-aerial volcanism before a second main ongoing building phase starting at about 750 ka. Sub-aerial construction of the S. Jorge ridge migrated progressively towards the west, but involved several overlapping volcanic episodes constrained along the main WNW-ESE structural axis of the island. Malic magmas erupted during the second phase have been also generated by partial melting of an enriched mantle source. Trace element data suggest, however, variable and lower degrees of partial melting of a shallower mantle domain, which is interpreted as an increasing control of lithospheric deformation on the genesis and extraction of primitive melts during the last 750 kyr. The multi-stage development of the S. Jorge volcanic ridge over the last 1.3 Myr has most likely been greatly influenced by regional tectonics, controlled by deformation along the diffuse boundary between the Nubian and the Eurasian plates, and the increasing effect of sea-floor spreading at the Mid-Atlantic Ridge.
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Esta Dissertação de Mestrado subordina-se ao tema: “Normalização de Ensaios de Carga”, sendo esta uma temática pouco desenvolvida em Portugal e para a qual não existe qualquer legislação. Os ensaios de carga são realizados em Portugal sem que haja uma legislação que normalize a sua realização e por isso cada entidade segue a sua metodologia nomeadamente entidades como o Laboratório Nacional de Engenharia Civil (LNEC) ou a Faculdade de Engenharia da Universidade do Porto (FEUP). Os objectivos principais deste trabalho são o estudo da legislação estrangeira existente para ensaios de carga e o seu confronto com as metodologias seguidas em Portugal, com o intuito de identificar aspectos consensuais e controversos e definir questões que possam ser transpostas para um documento normativo português. Este trabalho inicia-se com uma pesquisa bibliográfica, através da qual vão ser abordados conceitos básicos sobre os ensaios de carga como os seus objectivos, os tipos de ensaios ou o modo de tratamento de resultados e será elaborada uma breve resenha histórica dos ensaios de carga. É estudada a legislação existente noutros países, seleccionando-se os aspectos mais relevantes. São também abordadas as metodologias adoptadas por diversas entidades em Portugal como o LNEC e a FEUP. Por último, numa vertente mais analítica serão seleccionados os aspectos mais relevantes da legislação internacional e será estabelecido o confronto com as metodologias seguidas em Portugal de maneira a identificar aspectos relevantes a constar num documento normativo a elaborar futuramente em Portugal.
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Introdução – Os efeitos fisiológicos da atividade física e do treino são atualmente motivo de extensa investigação cujos resultados mostraram já de forma incontroversa os seus benefícios em diferentes condições clínicas. Diferentes estudos mostraram já os efeitos benéficos do exercício regular de intensidade leve a moderada na diminuição do risco de cancro, bem como na aptidão física de indivíduos portadores de cancro, submetidos ou não a cirurgia. A prescrição do exercício mais adequado para a sua maior eficácia na melhoria da aptidão física e para a diminuição da fadiga não é, no entanto, ainda consensual. O objetivo deste estudo foi o de rever o conhecimento atual sobre os benefícios do exercício físico em sobreviventes de cancro da mama, bem como sistematizar as linhas orientadoras atuais para a prescrição do exercício físico na referida população. Metodologia – Recorreu-se a uma revisão da literatura, tendo como base as palavras-chave: cancro da mama, sobreviventes de cancro da mama, risco de cancro, exercício físico, atividade física e treino, dando preferência a estudos que, na classificação de Oxford, correspondessem aos níveis I (ensaios clínicos randomizados e revisões sistemáticas) e II de evidência científica (ensaios clínicos não randomizados). Conclusão – Embora se reconheça que o exercício físico é benéfico para a população em geral e existam linhas orientadoras para a prescrição do exercício físico em indivíduos com cancro, estas não são ainda absolutamente consensuais, necessitando sempre de individualização no treino. A investigação em torno das questões que envolvem a adequada prescrição do exercício físico em indivíduos com ou em risco de desenvolver cancro é primordial. ABSTRACT - Introduction – Physiological effects of physical activity and training are currently subject of extensive research which has already showed uncontroversial benefits in different clinical conditions. Different studies have already shown the beneficial effects of mild to moderate regular exercise in decreasing cancer risk and increasing physical fitness of individuals suffering from cancer, undergoing surgery or not. However, the appropriate exercise prescription for greater efficacy in improving physical fitness and decreasing fatigue is not yet consensus. The aim of this study was to review current knowledge about the benefits of exercise on breast cancer survivors and systematize the existing guidelines for prescribing exercise in this population. Methodology – A literature review was conducted based on the keywords: breast cancer, breast cancer survivors, cancer risk, physical exercise, physical activity and training, giving preference to studies in the classification of Oxford corresponded to level I (randomized clinical trials and systematic reviews) and II (no randomized clinical trials) scientific evidence. Conclusion – Although it is recognized that exercise is beneficial for general population and that there are guidelines for exercise prescription for individuals with cancer, there is no absolute agreement and they constantly require individual adaptations in training. Research on issues involving the correct prescription of exercise for individuals with or at risk of developing cancer is vital.
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Background: A common task in analyzing microarray data is to determine which genes are differentially expressed across two (or more) kind of tissue samples or samples submitted under experimental conditions. Several statistical methods have been proposed to accomplish this goal, generally based on measures of distance between classes. It is well known that biological samples are heterogeneous because of factors such as molecular subtypes or genetic background that are often unknown to the experimenter. For instance, in experiments which involve molecular classification of tumors it is important to identify significant subtypes of cancer. Bimodal or multimodal distributions often reflect the presence of subsamples mixtures. Consequently, there can be genes differentially expressed on sample subgroups which are missed if usual statistical approaches are used. In this paper we propose a new graphical tool which not only identifies genes with up and down regulations, but also genes with differential expression in different subclasses, that are usually missed if current statistical methods are used. This tool is based on two measures of distance between samples, namely the overlapping coefficient (OVL) between two densities and the area under the receiver operating characteristic (ROC) curve. The methodology proposed here was implemented in the open-source R software. Results: This method was applied to a publicly available dataset, as well as to a simulated dataset. We compared our results with the ones obtained using some of the standard methods for detecting differentially expressed genes, namely Welch t-statistic, fold change (FC), rank products (RP), average difference (AD), weighted average difference (WAD), moderated t-statistic (modT), intensity-based moderated t-statistic (ibmT), significance analysis of microarrays (samT) and area under the ROC curve (AUC). On both datasets all differentially expressed genes with bimodal or multimodal distributions were not selected by all standard selection procedures. We also compared our results with (i) area between ROC curve and rising area (ABCR) and (ii) the test for not proper ROC curves (TNRC). We found our methodology more comprehensive, because it detects both bimodal and multimodal distributions and different variances can be considered on both samples. Another advantage of our method is that we can analyze graphically the behavior of different kinds of differentially expressed genes. Conclusion: Our results indicate that the arrow plot represents a new flexible and useful tool for the analysis of gene expression profiles from microarrays.
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The aim of the present work was to investigate the wetting behaviour of biomedical grade Ti-6Al-4V alloy surfaces textured by a femtosecond laser treatment. The material was treated in ambient atmosphere using an Yb: KYW chirped-pulse-regenerative amplification laser with a wavelength of 1030 nm and a pulse duration of 500 fs. Four main types of surface textures were obtained depending on the processing parameters and laser treatment method. These textures consist of: (1) nanoscale laser-induced periodic surface structures (LIPSS); (2) nanopillars; (3) a bimodal roughness distribution texture formed of LIPSS overlapping microcolumns; (4) a complex texture formed of LIPSS overlapping microcolumns with a periodic variation of the columns size in the laser scanning direction. The wettability of the surfaces was evaluated by the sessile drop method using distilled-deionized (DD) water and Hank's balanced salt solution (HBSS) as testing liquids. The laser treated surfaces present a hydrophilic behaviour as well as a high affinity for the saline solution, with equilibrium contact angles in the ranges 24.1-76.2. for DD water and 8.4-61.8. for HBSS. The wetting behaviour is anisotropic, reflecting the anisotropy of the surface textures. (c) 2012 Elsevier B.V. All rights reserved.
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Dissertação apresentada à Escola Superior de Educação de Lisboa para obtenção de grau de mestre em Ciências da Educação, especialidade de Supervisão em Educação
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Mestrado em Fisioterapia
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Mestrado em Gestão e Avaliação de Tecnologias em Saúde
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Beaches worldwide provide recreational opportunities to hundreds of millions of people and serve as important components of coastal economies. Beach water is often monitored for microbiological quality to detect the presence of indicators of human sewage contamination so as to prevent public health outbreaks associated with water contact. However, growing evidence suggests that beach sand can harbor microbes harmful to human health, often in concentrations greater than the beach water. Currently, there are no standards for monitoring, sampling, analyzing, or managing beach sand quality. In addition to indicator microbes, growing evidence has identified pathogenic bacteria, viruses, and fungi in a variety of beach sands worldwide. The public health threat associated with these populations through direct and indirect contact is unknown because so little research has been conducted relating to health outcomes associated with sand quality. In this manuscript, we present the consensus findings of a workshop of experts convened in Lisbon, Portugal to discuss the current state of knowledge on beach sand microbiological quality and to develop suggestions for standardizing the evaluation of sand at coastal beaches. The expert group at the "Microareias 2012" workshop recommends that 1) beach sand should be screened for a variety of pathogens harmful to human health, and sand monitoring should then be initiated alongside regular water monitoring; 2) sampling and analysis protocols should be standardized to allow proper comparisons among beach locations; and 3) further studies are needed to estimate human health risk with exposure to contaminated beach sand. Much of the manuscript is focused on research specific to Portugal, but similar results have been found elsewhere, and the findings have worldwide implications.
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Inflammatory bowel diseases (IBDs) are lifelong disorders predominantly present in developed countries. In their pathogenesis, an interaction between genetic and environmental factors is involved. This practice guide, prepared on behalf of the European Society of Pathology and the European Crohn's and Colitis Organisation, intends to provide a thorough basis for the histological evaluation of resection specimens and biopsy samples from patients with ulcerative colitis or Crohn's disease. Histopathologically, these diseases are characterised by the extent and the distribution of mucosal architectural abnormality, the cellularity of the lamina propria and the cell types present, but these features frequently overlap. If a definitive diagnosis is not possible, the term indeterminate colitis is used for resection specimens and the term inflammatory bowel disease unclassified for biopsies. Activity of disease is reflected by neutrophil granulocyte infiltration and epithelial damage. The evolution of the histological features that are useful for diagnosis is time- and disease-activity dependent: early disease and long-standing disease show different microscopic aspects. Likewise, the histopathology of childhood-onset IBD is distinctly different from adult-onset IBD. In the differential diagnosis of severe colitis refractory to immunosuppressive therapy, reactivation of latent cytomegalovirus (CMV) infection should be considered and CMV should be tested for in all patients. Finally, patients with longstanding IBD have an increased risk for the development of adenocarcinoma. Dysplasia is the universally used marker of an increased cancer risk, but inter-observer agreement is poor for the categories low-grade dysplasia and indefinite for dysplasia. A diagnosis of dysplasia should not be made by a single pathologist but needs to be confirmed by a pathologist with expertise in gastrointestinal pathology.
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The didactic update on requirements, types of feeding and dosages of nutrients by Su is a useful guide for clinicians on optimization of nutrition in preterm infants. We take this opportunity to focus on postdischarge nutrition in very preterm infants, which has not yet reached consensus, because of concerns regarding the potentially negative consequences of rapid catch-up growth on obesity and metabolic programming. Some formula feeding approaches have been proposed when mother’s milk is not available.