An image processing application for quantification of protein aggregates in Caenorhabditis elegans

Protein aggregation became a widely accepted marker of many polyQ disorders, including Machado-Joseph disease (MJD), and is often used as readout for disease progression and development of therapeutic strategies. The lack of good platforms to rapidly quantify protein aggregates in a wide range of disease animal models prompted us to generate a novel image processing application that automatically identifies and quantifies the aggregates in a standardized and operator-independent manner. We propose here a novel image processing tool to quantify the protein aggregates in a Caenorhabditis elegans (C. elegans) model of MJD. Confocal mi-croscopy images were obtained from animals of different genetic conditions. The image processing application was developed using MeVisLab as a platform to pro-cess, analyse and visualize the images obtained from those animals. All segmenta-tion algorithms were based on intensity pixel levels.The quantification of area or numbers of aggregates per total body area, as well as the number of aggregates per animal were shown to be reliable and reproducible measures of protein aggrega-tion in C. elegans. The results obtained were consistent with the levels of aggrega-tion observed in the images. In conclusion, this novel imaging processing applica-tion allows the non-biased, reliable and high throughput quantification of protein aggregates in a C. elegans model of MJD, which may contribute to a significant improvement on the prognosis of treatment effectiveness for this group of disor-ders

Energy harvesting performance of piezoelectric electrospun polymer fibers and polymer/ceramic composites

The energy harvesting efficiency of electrospun poly(vinylidene fluoride), its copolymer vinylidene fluoride-trifluoroethylene and composites of the later with piezoelectric BaTiOon interdigitated electrodes has been investigated. Further, a study of the influence of the electrospinning processing parameters on the size and distribution of the composites fibers has been performed. It is found that the best energy harvesting performance is obtained for the pure poly(vinylidene fluoride) fibers, with power outputs up to 0.03 W and 25 W under low and high mechanical deformation. The copolymer and the composites show reduced power output due to increased mechanical stiffness. The obtained values, among the largest found in the literature, the easy processing and the low cost and robustness of the polymer, demonstrate the applicability of the developed system.

Thermal degradation of Pb(Zr0.53Ti0.47)O3/poly(vinylidene fluoride) composites as a function of ceramic grain size and concentration

Poly(vinylidene fluoride)/Pb(Zr0.53Ti0.47)O3,([PVDF]1−x/[PZT]x) composites of volume fractions x and (0–3) type connectivity were prepared in the form of thin films. PZT powders with average grain sizes of 0.2, 0.84, and 2.35 μm in different volume fraction of PZT up to 40 % were mixed with the polymeric matrix. The influence of the inorganic particle size and its content on the thermal degradation properties of the composites was then investigated by means of thermo-gravimetric analysis. It is observed that filler size affects more than filler concentration the degradation temperature and activation energy of the polymer. In the same way and due to their larger specific area, smaller particles leave larger solid residuals after the polymer degradation. The polymer degradation mechanism is not significantly modified by the presence of the inorganic fillers. On the other hand, an inhibition effect occurs due to the presence of the fillers, affecting particularly the activation energy of the process.

Automatic segmentation and 3D feature extraction of protein aggregates in Caenorhabditis Elegans

In the last years, it has become increasingly clear that neurodegenerative diseases involve protein aggregation, a process often used as disease progression readout and to develop therapeutic strategies. This work presents an image processing tool to automatic segment, classify and quantify these aggregates and the whole 3D body of the nematode Caenorhabditis Elegans. A total of 150 data set images, containing different slices, were captured with a confocal microscope from animals of distinct genetic conditions. Because of the animals’ transparency, most of the slices pixels appeared dark, hampering their body volume direct reconstruction. Therefore, for each data set, all slices were stacked in one single 2D image in order to determine a volume approximation. The gradient of this image was input to an anisotropic diffusion algorithm that uses the Tukey’s biweight as edge-stopping function. The image histogram median of this outcome was used to dynamically determine a thresholding level, which allows the determination of a smoothed exterior contour of the worm and the medial axis of the worm body from thinning its skeleton. Based on this exterior contour diameter and the medial animal axis, random 3D points were then calculated to produce a volume mesh approximation. The protein aggregations were subsequently segmented based on an iso-value and blended with the resulting volume mesh. The results obtained were consistent with qualitative observations in literature, allowing non-biased, reliable and high throughput protein aggregates quantification. This may lead to a significant improvement on neurodegenerative diseases treatment planning and interventions prevention

Anotação, numa perspectiva de Direito Penal e de Criminologia, ao Acórdão do Supremo Tribunal de Justiça (português), de 13 de Abril de 2009 [Juiz Conselheiro Rodrigues da COSTA (Relator), Juiz Conselheiro Arménio SOTTOMAYOR (vencido nos termos da declaração junta) e Juiz Conselheiro Mota MIRANDA] - são o «lenocínio» e a prostituição, entre adultos livres, crimes? «Roxanne, you don't have to put on the red light»

Resumo: 1 – Sumário do Acórdão do Supremo Tribunal de Justiça, de 13 de Abril de 2011; 2 – Texto completo do Acórdão do Supremo Tribunal de Justiça, de 13 de Abril de 2009, Juiz Conselheiro Rodrigues da COSTA (Relator), Juiz Conselheiro Arménio SOTTOMAYOR (vencido nos termos da declaração junta) e Juiz Conselheiro Mota MIRANDA: cfr. http://www.dgsi.pt , 26 de Abril de 2011; 3 – Anotação; 3.1 – Introdução à anotação; 3.2 – A questão do suposto «bem jurídico» que seria tutelado pelo crime de «lenocínio» p.p.p.p.p. 169.º do código penal português; 3.2.1 – Ainda a questão do suposto «bem jurídico» que seria tutelado pelo crime de «lenocínio» p.p.p.p.p. 169.º do código penal português: uma maior procura e concretização jurídica e científica; 4 – Conclusões; § Abstract: 1 - Summary of the Sentence of the Supreme Court of Justice, 13 of April of 2011; 2 - Complete text of the Sentence of the Supreme Court of Justice, 13 of April of 2009, Advising Judge Rodrigues da COSTA (Reporter), Advising Judge Arménio SOTTOMAYOR (looser in the terms of the together declaration) and Advising Judge Mota MIRANDA: cfr. http://www.dgsi.pt , 26 of April of 2011; 3 - Notation; 3.1 - Introduction to the notation; 3.2 - The question of the presumption «legally protected interest» that would be tutored person for the crime of «pimpery (“pimping”)» p.p.p.p.p. 169.º of the Portuguese criminal code; 3.2.1 - Still the question of the presumption «legally protected interest» that would be tutored person for the crime of «pimpery» («pimping») p.p.p.p.p. 169.º of the Portuguese criminal code: a bigger search and legal and scientific concretion; 4 - Conclusions;