Biogeochemical processes and the diversity of Nhecolândia lakes, Brazil

The Pantanal of Nhecolândia, the world's largest and most diversified field of tropical lakes, comprises approximately 10,000 lakes, which cover an area of 24,000 km² and vary greatly in salinity, pH, alkalinity, colour, physiography and biological activity. The hyposaline lakes have variable pHs, low alkalinity, macrophytes and low phytoplankton densities. The saline lakes have pHs above 9 or 10, high alkalinity, a high density of phytoplankton and sand beaches. The cause of the diversity of these lakes has been an open question, which we have addressed in our research. Here we propose a hybrid process, both geochemical and biological, as the main cause, including (1) a climate with an important water deficit and poverty in Ca2+ in both superficial and phreatic waters; and (2) an elevation of pH during cyanobacteria blooms. These two aspects destabilise the general tendency of Earth's surface waters towards a neutral pH. This imbalance results in an increase in the pH and dissolution of previously precipitated amorphous silica and quartzose sand. During extreme droughts, amorphous silica precipitates in the inter-granular spaces of the lake bottom sediment, increasing the isolation of the lake from the phreatic level. This paper discusses this biogeochemical problem in the light of physicochemical, chemical, altimetric and phytoplankton data.

Presença de mosquitos (Diptera: Culicidae) em piscinões na zona leste de São Paulo

INTRODUÇÃO: Alterações no ambiente vêm contribuindo com mudanças climáticas, como o aumento do volume de chuvas, que acarreta as inundações. Medidas estão sendo tomadas no enfrentamento das inundações, como a implantação dos reservatórios de contenção de cheias (piscinões). Neste trabalho, foi avaliada a fauna de culicídeos, de importância epidemiológica, nos piscinões Caguaçu e Inhumas. MÉTODOS: Foram realizadas coletas mensais nos piscinões Caguaçu e Inhumas, situados na região leste de São Paulo, de março de 2006 a fevereiro de 2007, empregando-se os métodos de concha entomológica e aspirador. Para análise dos dados, foram realizadas análises estatísticas descritivas e a regressão linear simples. RESULTADOS: Foram coletados 8.917 culicídeos, destacando-se Culex (Culex) quinquefasciatus, que representou 98,9% dos espécimes no Inhumas e 95,2% no Caguaçu. No Caguaçu, a maior frequência de imaturos foi observada no vertedouro (61%) e no Inhumas na canaleta (42,6%). A precipitação prediz 87% da abundância numérica de larvas de terceiro e de quarto estágio no Caguaçu e 60% do número de pupas coletadas. No Inhumas, a precipitação explicou 36% da abundância numérica de larvas e 18% do número de pupas. CONCLUSÕES: Culex quinquefasciatus, vetor de agentes da filariose, arboviroses e fator de incômodo à população, foi a espécie mais frequente nos dois ambientes. Medidas de controle da espécie nos piscinões estudados se fazem necessárias tendo em vista seu potencial epidemiológico.

Rapid detection of bovine coronavirus by a semi-nested RT-PCR

Bovine coronavirus (BCoV) is a member of the group 2 of the Coronavirus (Nidovirales: Coronaviridae) and the causative agent of enteritis in both calves and adult bovine, as well as respiratory disease in calves. The present study aimed to develop a semi-nested RT-PCR for the detection of BCoV based on representative up-to-date sequences of the nucleocapsid gene, a conserved region of coronavirus genome. Three primers were designed, the first round with a 463bp and the second (semi-nested) with a 306bp predicted fragment. The analytical sensitivity was determined by 10-fold serial dilutions of the BCoV Kakegawa strain (HA titre: 256) in DEPC treated ultra-pure water, in fetal bovine serum (FBS) and in a BCoV-free fecal suspension, when positive results were found up to the 10-2, 10-3 and 10-7 dilutions, respectively, which suggests that the total amount of RNA in the sample influence the precipitation of pellets by the method of extraction used. When fecal samples was used, a large quantity of total RNA serves as carrier of BCoV RNA, demonstrating a high analytical sensitivity and lack of possible substances inhibiting the PCR. The final semi-nested RT-PCR protocol was applied to 25 fecal samples from adult cows, previously tested by a nested RT-PCR RdRp used as a reference test, resulting in 20 and 17 positives for the first and second tests, respectively, and a substantial agreement was found by kappa statistics (0.694). The high sensitivity and specificity of the new proposed method and the fact that primers were designed based on current BCoV sequences give basis to a more accurate diagnosis of BCoV-caused diseases, as well as to further insights on protocols for the detection of other Coronavirus representatives of both Animal and Public Health importance.