Evaluation of the antioxidant activity and antitumor activity of marine invertebrates extracts

Dissertação de Mestrado, Biologia Marinha, Faculdade de Ciências e Tecnologias, Universidade do Algarve, 2014

Tafonomia e paleoicnologia do neogénico superior do sector Cacela-Huelva (SE da Ibéria)

Tese de doutoramento em Paleontologia. Faculdade de Ciências do Mar e do Ambiente, Univ. do Algarve, 2005

Bycatch of crustacean and fish bottom trawl fisheries from southern Portugal (Algarve)

As part of two research projects for analysing bycatch and discards, we quantified catch composition, catch rates, bycatch and discard,, in two important commercial bottom trawl fisheries (crustacean and fish trawls) off the Southern coast of Portugal (Algarve). Stratified sampling by onboard observers took place from February 1999 to March 2001 and data were collected from 165 tows during 52 fishing trips. Commercial tat-get species included crustaceans: blue and red shrimp (Aristeus antennatus), deep-water rose shrimp (Parapenaeus longirostris), Norway lobster (Nepharops norvegicus); and fishes: scabreams (Diplodus spl). and Pagellus Spp.), horse Mackerels (Trachurus spp.) and European hake (Merluccius merluccius). The trawl fisheries are characterised by considerable amounts of bycatch: 59.5% and 80.4% of the overall total catch for crustacean and fish trawlers respectively. A total of 255 species were identified, which belonged to 15 classes of organisms ( 137 vertebrates, 112 invertebrates and algae). Crustacean trawlers had higher bycatch biodiversity. Bony fish (45.6% and 37.8%) followed by crustaceans (14.6% and 11.5%) were the dominant bycatch components of both crustacean and fish trawlers respectively. The influence of a number of factors (e.g. depth, fishing gear, tow duration and season) on bycatch and discards is discussed.

Discards of the Algarve (southern Portugal) crustacean trawl fishery

The crustacean trawl fishery off the Algarve coast (southern Portugal) takes place on the lower continental shelf and upper continental slope at depths between 150 and 600 m. This is a multi-species fishery targeting the shrimps Parapenaeus longirostris and Aristeus antennatus and the Norway lobster Nephrops norvegicus, with the latter two species the most important in the landings. The fishery is characterised by significant by-catch and discarding of a large number of species. As part of a study on the fate of trawl fishery discards, this component of the study focused on the quantification of the by-catch and discards of crustacean trawlers. Sampling took place on board seven commercial trawlers from June 1998 to October 1999. Data was collected from 48 tows in 22 fishing trips. The observers collected all of the catch that was discarded by the crew during the sorting operation and samples were taken to the laboratory for identification, weighing and measuring. The quantities of target species were recorded along with the presence of retained by-catch. Commercially valuable species that were retained included Plesiopenaeus edwardsianus, Aristeomorpha foliacea, Plesionika sp., and the fishes Lophius piscatorius and Merluccius merluccius. However, most of the species had no or little commercial value and were almost always discarded to the sea (90%). A total of 91 species were identified, 47 vertebrates and 44 invertebrates corresponding to 65 families. The Teleostei (78% and 68%) were the dominant group, both in number and weight. The species Micromesistius poutassou (34%), Gadiculus argenteus (10%) and Hoplostethus mediterraneus (8%) were the most important in weight. Ten species represented more than 82% of all discards in weight. Gadiculus argenteus (29%), Hoplostethus mediterraneus (21%) and Nezumia sclerorhynchus (10%) accounted for 60% of all discards in numbers. Data on the landed species composition is also presented.

Feeding habits of the deep-snouted pipefish Syngnathus typhle in a temperate coastal lagoon

Feeding habits of Syngnathus typhle were determined based on monthly sampling during experimental fishing in a coastal lagoon (Ria Formosa, South Portugal) from April 2004 to May 2002. The gut contents of 856 individuals were analysed and quantified with numerical and gravimetric methods, as well as with some complementary indices and measures (vacuity, fullness and relative importance). In this study, this species fed mainly on Copepoda, Mysidacea, small caridean grass shrimps (Hippolytidae and Palaemonidae) and small fishes (Gobiidae) and to a lesser degree on other small invertebrates. No significant differences were found between the diets of males and females. However, significant differences in the fullness indexes of both sexes were observed during the reproductive period. Significant differences in the diet among seasons were also verified but no seasonal trends were discovered. Snout length showed a linear increase with growth while mouth area and total length displayed an allometric relation. Mouth shape varied between an ellipse and an almost perfect circle. The increase in mouth area and snout length as S. typhle grows contributed to the observed ontogenic diet shift with specimens smaller than 10 cm feeding almost exclusively on Copepoda, medium sized specimens feeding mainly on Hippolytidae and Mysidacea, while larger specimens preyed on Hippolytidae, Palaemonidae and Gobiidae. Prey size generally increased with size of S. typhle. (c) 2007 Elsevier Ltd. All rights reserved.

Non-commercial invertebrate discards in an experimental trammel net fishery

Non-commercial invertebrate discards in an experimental trammel net fishery were studied in relation to selectivity of the gear, depth, soak time and season. Forty experimental fishing trials were carried out over a 1-year period with six combinations of small mesh (100, 120 and 140 mm) inner and large mesh (600 and 800 mm) outer panels. On average, 43.8 +/- 12.2 (SD) (individuals 1000 m(-1) of net) of non-commercial invertebrates were discarded, accounting for 48% and 65% of the total catch and total discards by numbers, respectively. Within non-commercial invertebrates discards, the six most abundant species by number were Phallusia mammillata (Cuvier) (27.5%), Cymbium olla (L.) (13.0%), Sphaerechinus granularis (Lamarck) (11.3%), Paracentrotus lividus (Lamarck) (10.9%), Astropartus mediterraneus (Risso) (8.2%) and Astropecten aranciacus (L.) (8.1%); Echinoderms (43.1%) particularly important. The highest and lowest discard ratios were found in autumn and winter, respectively. Discards generally decreased with depth, varied considerably in relation to soak time and were not related to mesh size combinations. Trammel nets seem to be the most important gear in terms of ecological impacts on benthic invertebrates compared with other coastal fishing gears and at the depths studied (15-60 m).

The hake deepwater semi-pelagic ("pedra-bola") longline fishery in the Algarve (southern Portugal)

A 2-year study of the European hake (Merluccius merluccius) semi-pelagic ("pedra-bola) longline fishery was carried out in the Algarve (southern Portugal). This fishery takes place on the continental slope at 200-700 m depths. using monofilament longlines that are lifted off the bottom at regular intervals by glass balls. Hook selectivity trials were carried out with four hook sizes (SIAPAL brand numbers 10, 9, 7 and 5) from March to August 1997 and May to August 1998. At least 32 species of fish and invertebrates were caught, with hake dominating the catch (41 and 45% of the catch in numbers), followed by Galeus melastomus (23 and 19%), Micromesistius poutassou (10 and 7%), Benthodesmus elongatus (8 and 5%), Etmopterus pusillus (6 and 9%) and Scyliorhinus canicula (5 and 4%). Apart from the hake, and some species of commercial value such as G. melastomus (only the large individuals), Ray's bream (Brama brama, 1.4 and 4%), silver scabbard fish (Lepidopus caudatus. 1 and 2.5%), swordfish (Xiphins gladius, <1%), wreckfish (Polyprion americanus, <1%). conger eel (Conger conger. <1%), and bluemouth rockfish (Helicolenus dactylopterus, <1%)- most of the other species are discarded, used as bait in traps or consumed by the fishermen. Catch rates (number of fish per 100 hooks) for hake and for all species combined decreased significantly with hook size. Hake catch size frequency distributions for the different hook sizes in 1997 and 1998 were highly overlapped, with the four different hooks catching a wide range of sizes. Although catch size frequency distributions for the different sized hooks were not significantly different in 1997, hake caught in 1998 were characterised by smaller sizes and size ranges. (C) 2001 Elsevier Science B.V. All rights reserved.

A conservation trade-off? Interspecific differences in seahorse responses to experimental changes in fishing effort

1. A 2-year experimental seining programme and underwater visual censuses were undertaken to quantify the direct effects of active demersal fishing on the population structure and relative abundance of two sympatric seahorse species of conservation concern: the European long-snouted seahorse, Hippocampus guttulatus Cuvier 1829 and the short-snouted seahorse, Hippocampus hippocampus L. The influence of habitat preference on population-level responses to changes in habitat structure following a reduction in fishing effort was also investigated. 2. It was predicted that the benthic habitat would be more structurally complex after fishing ceased and that seahorse densities would increase in response to reduced fishing mortality. Furthermore, it was predicted that the magnitude of the increase in density would be greater for H. guttulatus than for H. hippocampus, because the former species prefers complex vegetated habitats while the latter species uses sparsely vegetated habitats. 3. As predicted, the amount of habitat cover increased significantly when seining ceased, primarily through increases in the abundance of drifting macroalgae and unattached invertebrates. Despite similarities in life histories, the two seahorse species responded differently in terms of magnitude and direction to reduced fishing effort: the abundance of H. guttulatus increased significantly while H. hippocampus decreased in abundance. 4. Results suggest that active demersal fishing may influence the magnitude and direction of the responses of benthic marine fishes to exploitation through its impacts on habitat structure. An increase in habitat cover appeared to favour higher densities of H. guttulatus when seining effort was reduced. By contrast, repeated seining, which maintained less complex habitats, appeared to favour greater abundances of H. hippocampus. 5. Given differences in habitat preference among benthic marine fishes subject to incidental capture in fisheries, simultaneous attempts to manage populations of sympatric species may require complementary strategies that support the persistence of diverse habitat types. Copyright (c) 2006 John Wiley & Sons, Ltd.

'Reserve effect' within a temperate marine protected area in the north-eastern Atlantic (Arrabida Marine Park, Portugal)

Benefits of marine protected areas depend on local ecological and socio-cultural aspects which are critical to the success of the protection measures. In particular, before-after comparisons are indispensable to disentangle the effects of protection from those of different physical and ecological characteristics among areas. Using underwater visual surveys, we assessed whether biomass and abundance of temperate reef fish assemblages and target invertebrates increased inside a no-take area in the Arrabida Marine Park (Portugal) 3 to 4 yr after its establishment. Data were compared to a previous study, conducted 10 yr before protection was effective. Control-effect comparisons after reserve establishment showed a positive response of legal-size demersal fish and below legal-size target invertebrates. The first evidence of protection was found in biomass but not in numbers. Non-target groups and below legal-size demersal fish had a significant interaction among reserve and habitat complexity indices for either density or biomass, suggesting a lack of a reserve effect. Before-after comparisons revealed non-significant patterns of increase in numbers of target species compared to non-target ones. The most important commercial species showed the largest increase in density after protection was established. Significantly higher abundances and proportionally heavier individuals of these species were also found inside the reserve in the control-effect comparisons. These findings are reinforced by an increasing trend in landings which are consistent with the early detection of a reserve effect.

Comparison of small remotely operated vehicles and diver-operated video of circalittoral benthos

Underwater video transect methods using small remotely operated vehicles (ROVs) and diveroperated video (DOV) are commonly used in benthic biodiversity assessments. Constraints posed by deeper waters have made surveys of the circalittoral zone ([30 m depth), a particularly challenging problem. Here we compare benthic diversity metrics and cluster analyses obtained with ROV and DOV between 45 and 65 m depth off southwest Iberia, across local (tens to hundreds of meters) and regional scales (tens of kilometers). Results showed no difference between methods in terms of the benthic species richness, taxonomic distinctness, and beta diversity, but only minor differences in the spatial structure depicted at the regional level. At the local scale, DOV performed better at discriminating patterns likely because of the divers visual acuity. We found that small ROV and DOV are reliable and comparable methods for the study of circalittoral benthic assemblages and can be used in a complimentary way to detect the greatest amount of variation in benthic ecosystems. Our study facilitates the understanding of capabilities and limitations of two underwater video methods and provides important insight into choice of the most appropriate technique.