4 resultados para Encompassing

em SAPIENTIA - Universidade do Algarve - Portugal


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Tese dout., Doctor of Philisophy, Sheffield Hallam University, 2001

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In this study we describe the isolation and characterisation of the parathyroid hormone-related protein (PTHrP) gene from the teleost Fugu rubripes. The gene has a relatively simple structure, compared with tetrapod PTHrP genes, composed of three exons and two introns, encompassing 2.25 kb of genomic DNA. The gene encodes a protein of 163 amino acids, with a putative signal peptide of 37 amino acids and a mature peptide of 126 amino acids. The overall homology with known tetrapod PTHrP proteins is low (36%), with a novel sequence inserted between positions 38 and 65, the absence of the conserved pentapeptide (TRSAW) and shortened C-terminal domain. The N-terminus shows greater conservation (62%), suggesting that it may have a hypercalcaemic function similar to that of tetrapod PTHrP. In situ localisation and RT–PCR have demonstrated the presence of PTHrP in a wide range of tissues with varying levels of expression. Sequence scanning of overlapping cosmids has identified three additional genes, TMPO, LDHB and KCNA1, which map to human chromosome 12, with the latter two mapping to 12p12-11.2. PTHrP in human also maps to this chromosome 12 sub-region, thus demonstrating conservation of synteny between human and Fugu.

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Understanding the factors that affect seagrass meadows encompassing their entire range of distribution is challenging yet important for their conservation. We model the environmental niche of Cymodocea nodosa using a combination of environmental variables and landscape metrics to examine factors defining its distribution and find suitable habitats for the species. The most relevant environmental variables defining the distribution of C. nodosa were sea surface temperature (SST) and salinity. We found suitable habitats at SST from 5.8 ºC to 26.4 ºC and salinity ranging from 17.5 to 39.3. Optimal values of mean winter wave height ranged between 1.2 m and 1.5 m, while waves higher than 2.5 m seemed to limit the presence of the species. The influence of nutrients and pH, despite having weight on the models, was not so clear in terms of ranges that confine the distribution of the species. Landscape metrics able to capture variation in the coastline enhanced significantly the accuracy of the models, despite the limitations caused by the scale of the study. By contrasting predictive approaches, we defined the variables affecting the distributional areas that seem unsuitable for C. nodosa as well as those suitable habitats not occupied by the species. These findings are encouraging for its use in future studies on climate-related marine range shifts and meadow restoration projects of these fragile ecosystems.

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Temporal variation in a temperate cryptobenthic fish assemblage at the Arrabida Marine Park (Portugal) was assessed by visual Surveys during 2002 and 2003. A total of 9596 fish from 11 families and 30 species was recorded. There were no changes in structure or density at the assemblage level between years, whereas diversity changed significantly due to a higher number of abundant species in the second year. A similar seasonal trend was found between years, with a significant overall density increase in autumn. This is partially explained by the arrival of new recruits of some of the most abundant species in the assemblage. Assemblage diversity and structure also changed across seasons. A group of species encompassing Gobius xanthocephalus, Tripterygion delaisi, Parablennius pilicornis, Gobius paganellus, Lepadogaster candollii and Lepadogaster spp. were analysed in detail. The temporal patterns of two of the most abundant species, G. xanthocephalus and T delaisi, mimicked the overall temporal patterns of the assemblage. We suggest that the inter-annual stability in density of this subtidal fish assemblage may be similar to what has been reported for the intertidal and that strong post-settlement processes are probably shaping this assemblage.