Development and application of DNA techniques for validating and improving pinniped diet estimates

Polymerase chain reaction techniques were developed and applied to identify DNA from .40 species of prey contained in fecal (scat) soft-part matrix collected at terrestrial sites used by Steller sea lions (Eumetopias jubatus) in British Columbia and the eastern Aleutian Islands, Alaska. Sixty percent more fish and cephalopod prey were identified by morphological analyses of hard parts compared with DNA analysis of soft parts (hard parts identified higher relative proportions of Ammodytes sp., Cottidae, and certain Gadidae). DNA identified 213 prey occurrences, of which 75 (35%) were undetected by hard parts (mainly Salmonidae, Pleuronectidae, Elasmobranchii, and Cephalopoda), and thereby increased species occurrences by 22% overall and species richness in 44% of cases (when comparing 110 scats that amplified prey DNA). Prey composition was identical within only 20% of scats. Overall, diet composition derived from both identification techniques combined did not differ significantly from hard-part identification alone, suggesting that past scat-based diet studies have not missed major dietary components. However, significant differences in relative diet contributions across scats (as identified using the two techniques separately) reflect passage rate differences between hard and soft digesta material and highlight certain hypothesized limitations in conventional morphological-based methods (e.g., differences in resistance to digestion, hard part regurgitation, partial and secondary prey consumption), as well as potential technical issues (e.g., resolution of primer efficiency and sensitivity and scat subsampling protocols). DNA analysis of salmon occurrence (from scat soft-part matrix and 238 archived salmon hard parts) provided species-level taxonomic resolution that could not be obtained by morphological identification and showed that Steller sea lions were primarily consuming pink (Oncorhynchus gorbuscha) and chum (Oncorhynchus keta) salmon. Notably, DNA from Atlantic salmon (Salmo salar) that likely originated from a distant fish farm was also detected in two scats from one site in the eastern Aleutian Islands. Overall, molecular techniques are valuable for identifying prey in the fecal remains of marine predators. Combining DNA and hard-part identification will effectively alleviate certain predicted biases and will ultimately enhance measures of diet richness, fisheries interactions (especially salmon-related ones), and the ecological role of pinnipeds and other marine predators, to the benefit of marine wildlife conservationists and fisheries managers.

Consequences of Early Late-Pleistocene Megadroughts in Tropical Africa

Extremely arid conditions in tropical Africa occurred in several discrete episodes between 135 and 90 ka, as demonstrated by lake core and seismic records from multiple basins [Scholz CA, Johnson TC, Cohen AS, King JW, Peck J, Overpeck JT, Talbot MR, Brown ET, Kalindekafe L,Amoako PYO, et al. (2007) Proc Natl Acad SciUSA104:16416–16421]. This resulted in extraordinarily low lake levels, even in Africa’s deepest lakes.On the basis of well dated paleoecological records from Lake Malawi, which reflect both local and regional conditions, we show that this aridity had severe consequences for terrestrial and aquatic ecosystems. During the most arid phase, there was extremely low pollen production and limited charred-particle deposition, indicating insufficient vegetation to maintain substantial fires, and the Lake Malawi watershed experienced cool, semidesert conditions (<400 mm>/yr precipitation). Fossil and sedimentological data show that Lake Malawi itself, currently 706mdeep, was reduced to an ~125 m deep saline, alkaline, well mixed lake. This episode of aridity was far more extreme than any experienced in the Afrotropics during the Last Glacial Maximum (~35–15 ka). Aridity diminished after 95 ka, lake levels rose erratically, and salinity/alkalinity declined, reaching near-modern conditions after 60 ka. This record of lake levels and changing limnological conditions provides a framework for interpreting the evolution of the Lake Malawi fish and invertebrate species flocks. Moreover, this record, coupled with other regional records of early Late Pleistocene aridity, places new constraints on models of Afrotropical biogeographic refugia and early modern human population expansion into and out of tropical Africa.

The Probe, Issue 204 - September 1999

USFWS to Explore Canada Goose Management Strategies -- from a press release issued Aug. 3 by the US. Fish & Wildlife Service, written by Chris Tollefson. Anti-Trapping Measure Passes House Oregon Legislature Moves To Ensure Safety Of Its Citizens Against Cougars Acord Promoted Away From Wildlife Services New State Director US DA/APHIS in Mississippi is Kristina Godwin BOOk R e v i e w : "Living With Wildlife: How to Enjoy, Cope With, and Protect North America's Wild Creatures Around Your Home and Theirs," The California Center for Wildlife, with Diana Landau and Shelley Stump. San Francisco: A Sierra Club Book. 1994. 340 pp. + index $15.00. French Shepherds Protest Predators Rabbit Calicivirus Kills 65% of Rabbit Population Abstracts from the 2nd International Wildlife Management Congress, Hungary Crop Damage by Wildlife in Northern Ghana – O. I. Aalangdon* and A.S. Langyintuo, *Dept. of Renewable Natural Resources, University for Development Studies, Tamale Northern Region, Ghana Large Predators in Slovenia On the Way from Near Extermination to Overprotection and Back: Is Conservation Management of Large Predators in Cultural Landscapes Possible At All? -- M. Adamic, Chair of Wildlife Ecology, Biotechnical Faculty, University of Ljubljana, Slovenia Human-wolf Conflicts in the East Baltic: Past, Present, and Future -- Z. Andersone*, L. Balciauskas, and H. Valdmann., *Kemeri National Park, KemeriJurmala, Latvia Gray Wolf Restoration in the Northwestern United States -- E.E. Bangs*, J.A. Fontaine, D.W. Smith, C. Mack, and C. C. Niemeyer, *U.S. Fish & Wildlife Service, Helena, MT The Impact of Changing U.S. Demographics on the Future of Deer Hunting -- R. D. Brown, Wildlife & Fisheries Sciences, Texas A&M University, College Station, TX Management of Overabundant Marcropods in Nature Reserves: 6 Case Studies from Southeastern Australia -- G. Coulson, Dept. of Zoology,University of Melbourne,Parkville, Victoria, Australia