Obtaining environmental favourability functions from logistic regression

Logistic regression is a statistical tool widely used for predicting species’ potential distributions starting from presence/absence data and a set of independent variables. However, logistic regression equations compute probability values based not only on the values of the predictor variables but also on the relative proportion of presences and absences in the dataset, which does not adequately describe the environmental favourability for or against species presence. A few strategies have been used to circumvent this, but they usually imply an alteration of the original data or the discarding of potentially valuable information. We propose a way to obtain from logistic regression an environmental favourability function whose results are not affected by an uneven proportion of presences and absences. We tested the method on the distribution of virtual species in an imaginary territory. The favourability models yielded similar values regardless of the variation in the presence/absence ratio. We also illustrate with the example of the Pyrenean desman’s (Galemys pyrenaicus) distribution in Spain. The favourability model yielded more realistic potential distribution maps than the logistic regression model. Favourability values can be regarded as the degree of membership of the fuzzy set of sites whose environmental conditions are favourable to the species, which enables applying the rules of fuzzy logic to distribution modelling. They also allow for direct comparisons between models for species with different presence/absence ratios in the study area. This makes themmore useful to estimate the conservation value of areas, to design ecological corridors, or to select appropriate areas for species reintroductions.

Exploring the Alentejo continental shelf for minerals and Quaternary environmental changes: preliminary results of the MINEPLAT survey.

This study presents the preliminary results of MINEPLAT survey, organized by Universidade de Évora in partnership with Instituto Português do Mar e da Atmosfera (IPMA) based on an integrated analysis of geophysical data namely, ultra-high resolution seismic data (UHRS), multibeam data, backscatter data and magnetic data. The survey took place on north Alentejo continental shelf (30 to 200 meters depth) between Tróia and Sines. The interpretation and integration of the acquired data allows substantial improvement on the knowledge on the morphology and geology of the surface and subsurface of the Alentejo continental shelf towards the assessment of the mineral resources potential in the continental shelf off Alentejo and of the environmental conditions caused by the tectonic uplift in the Pliocene-Quaternary.

Modulation of gregarious settlement of the stalked barnacle, Pollicipes pollicipes: a laboratory study

Although recruitment patterns of Pollicipes pollicipes (Crustacea: Scalpelliformes) in the wild have been inves- tigated, no studies have yet focused on the factors that affect settlement. In the present paper, settlement of P. pollicipes on conspecifics (gregarious settlement) was investigated in the laboratory as a function of environmental conditions (hydrody- namics, temperature, light and salinity), larval age and batch. This study aimed to understand how these factors modulate set- tlement in the laboratory and elucidate how they might impact recruitment patterns in nature. Maximum attachment on adults was 30-35%, with a one-week metamorphosis rate of 70-80%. Batch differences affected both attachment and metamorpho- sis. Attachment rate was higher at natural salinity (30-40 psu), with lower salinity (20 psu) decreasing metamorphosis rate. Cyprid attachment was stimulated by light conditions and circulating water. This might relate to a preference for positioning high in the water column in nature, but also to increased cyprid-surface contact in conditions of circulating water. Older cyprids (3 or 6 days) showed higher attachment than un-aged larvae, though fewer 6-day-old larvae metamorphosed. Tem- perature did not affect attachment rate, but the metamorphosis rate decreased at 14°C (compared with 17 or 20°C), implying that differences in temperature during the breeding season can affect how quickly cyprids metamorphose to the juvenile. Cyprids survived for prolonged periods ( 20 days; 40% survival), likely due to efficient energy saving by intercalating long periods of inactivity with fast bursts of activity upon stimulation.