Dissociation of egocentric and allocentric spatial processing in prefrontal cortex

Monkeys with lesions of areas 9 and 46 performed three variants of the spatial delayed response (SDR) task. There were no impairments in allocentric spatial memory in which geometrical relationships between environmental cues were used to identify spatial location; thus, memory of a 3D environmental map is intact. In contrast, there were severe impairments in egocentric spatial memory guided by visual or tactile cues that monkeys can relate to their viewing perspective during testing. These results strongly suggest that dorsolateral prefrontal cortex selectively mediates spatial memory tasks that are solved by referencing the location of targets to the body's orientation. (C) 2003 Lippincott Williams Wilkins.

Multiplex detection of mutations in clinical isolates of rifampin-resistant Mycobacterium tuberculosis by short oligonucleotide Ligation assay on DNA chips

A new approach, short-oligonucleotide-ligation assay on DNA chip (SOLAC), is developed to detect mutations in rifampin-resistant Mycobacterium tuberculosis. The method needs only four common probes to detect 15 mutational variants of the rpoB gene within 12 h. Fifty-five rifampin-resistant M. tuberculosis isolates were analyzed, resulting in 87.3% accuracy and 83.6% concordance relative to DNA sequencing.

Comparative study on in vitro inhibition of grass carp (Ctenopharyngodon idellus) and mouse protein phosphatases by microcystins

Microcystins isolated from toxic cyanobacteria are potent inhibitors of protein phosphatases 1 and 2A (PP1 and PP2A). The inhibitory effects of three structural variants of microcystins (microcystin-LR, -YR, and -RR) on protein phosphatases isolated and purified from the liver and kidney of grass carp (Ctenopharyngodon idellus) were investigated using the P-32 radiometric assay. The relationships between percentage inhibition of protein phosphatase activity and microcystin levels followed a typical dose-dependent sigmoid curve. These results were compared to those obtained from mouse PP2A. The degree and pattern of inhibition of both fish and mouse protein phosphatases by microcystins were similar. Protein phosphatases in crude fish tissue homogenates showed similar inhibition patterns as purified fish PP2A toward microcystins. (C) 2000 by John Wiley & Sons, Inc.

The second dissociation threshold bound levels of hydrogen molecule

The near-threshold highly bound states of all three stable isotopic variants of molecular hydrogen have been studied. Numerous perturbations and unexpected transitions are observed as far as 1cm(-1) just below the second dissociation threshold. This complex structure may arise from a combination of nonadiabatic coupling between B, B', C electronic states, perturbations due to. ne and hyperfine interactions, and strong shape resonances. The perturbed near-threshold states and vibrational continuum exhibit finegrained structure, differing greatly between isotopes because of varying nonadiabatic coupling.

Robustness and dissipation of mitogen-activated protein kinases signal transduction network: Underlying funneled landscape against stochastic fluctuations

We uncovered the underlying energy landscape of the mitogen-activated protein kinases signal transduction cellular network by exploring the statistical natures of the Brownian dynamical trajectories. We introduce a dimensionless quantity: The robustness ratio of energy gap versus local roughness to measure the global topography of the underlying landscape. A high robustness ratio implies funneled landscape. The landscape is quite robust against environmental fluctuations and variants of the intrinsic chemical reaction rates.

The genomic structure, alternative splicing and immune response of Chlamys farreri thioester-containing protein

MEP is a member of thioester-containing protein (TEP) family found in Zhikong scallop Chlamys farreri and is involved in innate immunity against invading microbes. In the present study, the genomic DNA of CfTEP was cloned and characterized. The genomic DNA sequence of CfTEP consisted of 40 exons and 39 introns spanning 35 kb with all exon-intron junction sequences agreeing with the GT/AG consensus. The genomic organization of CfTEP was similar to human and mouse 0 rather than ciona C3-1 and Drosophila dTEP2. By RT-PCR technique, seven different cDNA variants of CfTEP (designated as CfTEP-A-CfTEP-G) were cloned from scallop gonad. CfTEP-A-CfTEP-F were produced by alternative splicing of six mutually exclusive exons (exons 19-24), respectively, which encoded the highly variable central region. While in CfTEP-G, the deletion of all the six exons introduced a new translation stop site and might trigger nonsense mediated decay (NMD). The mRNA expression and the proportion of the seven CfTEP variant transcripts were examined in the gonad of scallops after bacterial challenge. The fragments containing the highly variable central region of UTEP were amplified by RT-PCR and a 100 positive clones were sequenced randomly. The expression profiles of the seven MEP variants were different and displayed the sex and bacteria dependent manner. In the blank, sea water and Listonella anguillarum challenged subgroups of male scallops, all the transcripts detected were CfTEP-G isoform. In the Micrococcus luteus challenged subgroup, the isoforms expressed and their proportions were CfTEP-F (54%), CfTEP-B (23%), CfTEP-A (10%), CfTEP-C (7%) and CfTEP-E (6%). However, in the gonad of female scallops, only CfTEP-A were found in blank and sea water challenged subgroups. After L anguillarum or M. luteus challenge, four and five isoforms were detected, respectively, with CfTEP-F isoform being the most one in the both subgroups. These results suggested that the evolution of TEP genes was very complex, and that the diverse CfTEP transcripts generated by alternative splicing played an important role as pattern recognition receptors in the innate immune defense of scallops. (C) 2009 Elsevier Ltd. All rights reserved.

Chromosome segregation in fertilized eggs from triploid Pacific oysters, Crassostrea gigas (Thunberg), following inhibition of polar body 1

Chromosome segregation in fertilized eggs from triploid Pacific oysters, following inhibition of the first polar body (PB1), was studied with acetic orcein staining techniques. To block the release of PB1, fertilized eggs were treated with 0.5 mg/l of cytochalasin B (CB). Four types of segregation were observed, namely, ''tripolar segregation'' (54.5%), ''united bipolar segregation'' (12%), ''separated bipolar segregation'' (2.5%), and ''incomplete united bipolar segregation'' (4%). The remaining 23% could not be classified because of chromosome disorganization, but appeared to be variants of the above. It seemed clear that the predominant pattern that gave rise to tetraploids was united bipolar segregation, although certain separated bipolar segregations might also lead to the formation of tetraploids. The sequential events of meioses observed in CB-treated eggs are described. The asynchrony of meiotic events and possible mechanisms for the various types of chromosome segregation are discussed.

Alternative splicing of the FMR1 gene in human tissues of fetal and adult

To study the time- and tissue-specificity of alternative splicing of the FMR1 gene, we analyzed the alternative splicing pattern of the FMR1 gene in human tissues from adult and fetus using RT-PCR coupled with capillary electrophoresis. Seven alternative splicing variants of FMR1 were found in adult liver and lung. The major three alternative splicing variants of the FMR1 gene in all analyzed fetal tissues were same, though the number of minor isoforms and the relative abundance of major isoforms were different. The major difference of the alternative splicing pat tem between adult and fetus was in exon 12 and 17. The results suggest that the alternative splicing pattern of the FMR1 gene is non-tissue-specific in the same developmental stage and a developmental switch may be present.

圆叶牵牛花青素代谢途径的基因型变异与花色变异的进化生物学研究

基因型变异和表型变异的相互关系问题是尚未解决的生物学基本问题之一，而解决这个问题的一个有效方法是研究基因组中功能相关基因的分子进化和表型效应的相互关系。在本研究中我们利用圆叶牵牛花青素代谢途径（该途径合成了与花色形成有关的色素）来研究表型变异和基因型变异的进化关系，希望探讨两个问题：1、代谢途径上基因多态性在不同位点的表现程度如何? 2、在中国种群中传粉者对花色有无选择? 在对第一个问题的研究中调查了中国圆叶牵牛花青素代谢途径部分结构基因和调控基因的多态性。所研究的结构基因为途径的第一个关键酶基因CHS-D基因和较下游的ANS基因、UF3GT基因，以及调控基因W位点。其次是在温室中进行人工自交以获得所研究基因的纯合体。在对第二个问题的研究中，首先调查了野外圆叶牵牛不同花色的传粉者和传粉几率，其次是分析有色花个体与白花个体中的遗传变异程度。目前的研究结果表明CHS-D位点有3个等位基因，其中在中国的西南部地区发现了1个新的、在已报道的7个等位基因以外的等位基因;较下游的结构酶基因ANS位点存在有5个等位基因（在中国新发现3个等位基因）;UF3GT位点目前只发现有2个已报道的等位基因。在中国的圆叶牵牛中，新发现调控基因W位点上一个有功能的等位基因Ipmyb2，它与已报道的等位基因Ipmyb1的差异主要存在于内含子部分，而与发生缺失（1个6bp的缺失和1个19bp的缺失）后无功能的等位基因ipmyb2（该基因造成白花）存在外显子部分的8个碱基的差异。野外传粉观察结果表明，白花个体与有色花个体受到传粉者介导的选择，传粉者偏爱有色花而歧视白花，而且与在美洲不同，在中国圆叶牵牛的主要授粉者为蛾类而不是蜂类，从野外观察统计的结果看蛾类的传粉效率要高于蜂类。以上结果表明：1）花青素代谢途径上酶基因的位点均有一定程度的多态，其中尤以ANS为最高;调控基因ipmyb2的核苷酸缺失造成该基因停止功能，使其纯合子的个体开白色花。2）授粉者所介导的花色表型选择确实在中国种群中发生，有可能进一步增加花色代谢途径上基因位点的遗传变异。

药蒲公英（Taraxacum officinale weber）耐盐变异体的筛选及其耐盐性分析研究

以药蒲公英（Taraxacum officinale Weber）叶片外植体为材料诱导愈伤组织。以NaCl作为选择因子，从愈伤组织直接筛选。在选择培养基上，大部分愈伤组织褐化死亡，在一些褐化死亡的愈伤组织周围有少量新的细胞团生长，挑选生长存活状况好的细胞团转接到新鲜培养基上，每3周继代一次，经3个月继代筛选获得了耐1.5% NaCl的药蒲公英细胞团。以普通愈伤为对照，发现随着NaCl浓度的升高，耐盐愈伤的相对生长率下降但显著高于对照;且随着盐胁迫处理时间的延长持续升高，而普通愈伤对照几乎停止生长，说明耐盐愈伤具有相对稳定的耐盐性。在蛋白水平上，耐盐愈伤与对照愈伤差异明显，SDS-PAGE分析显示：耐盐愈伤比对照多出一条34 KD大小的蛋白带，且30 KD，18 KD左右的蛋白带明显上调。相同处理条件下耐盐愈伤脯氨酸的增加幅度高于对照。盐胁迫条件下，耐盐愈伤的超氧化物歧化酶（SOD）、过氧化物酶（POD）和过氧化氢酶（CAT）活性明显高于对照，且随着处理时间的延长和盐浓度的增加呈现升高的趋势，而对照则呈现先升高后下降的趋势。1.5% NaCl处理前后，耐盐愈伤的总黄酮含量显著高于对照。结果说明耐盐愈伤一方面通过积累蛋白和其他小分子有机溶质的方式调节其渗透平衡，另一方面还可通过提高抗氧化能力降低盐分造成的次级伤害。 将耐1.5% NaCl的药蒲公英愈伤组织接种在分化培养基上分化出芽，之后将再生芽转接到生根培养基中进行生根培养，经4个月得到了12株耐1.5% NaCl的药蒲公英再生植株。与野生型相比，耐盐植株叶片宽大、叶柄粗短、叶表面覆盖白色细毛，根粗壮较短，花茎中部具有2 cm左右的苞叶。RAPD和SDS-PAGE检测表明，耐盐植株与对照植株在DNA及蛋白水平上均存在明显差异。1.5% NaCl处理后，与普通再生植株相比，耐盐株系的抗氧化酶活性明显提高，脯氨酸含量上升幅度更为显著，而丙二醛含量降低，其主要药用成分黄酮的含量显著增加。这些结果说明耐盐植株的抗氧化防御能力明显增强。以上结果表明耐1.5% NaCl的药蒲公英再生植株为耐1.5% NaCl药蒲公英变异体，这些耐盐变异体有望成为抗盐耐海水蔬菜家族的新成员。同时，这些耐盐变异体植株比普通植株具有更高的医用商业价值。耐1.5% NaCl的药蒲公英再生变异体遗传稳定性的研究正在进行中。

空间注意系统中的动物特异性模块

Human being’s visual attentional system is the direct results of millions of years of evolutionary selection. As an adaptation to the environment, the most prominent function of attentional system is to facilitate the effective selection and subsequent processing of the most critical information and events from the environment with the aim of enhancing a given individual’s chance of passing his/her gene to the next generation. In the living environment of ancestral human beings, animals were undoubtedly one of those stimulus categories of great evolutionary significance. Since the process of animal-related information had life-or-death consequences for ancestral human beings, some researchers proposed a so-called animate monitoring hypothesis which states that there exists a category-specific module in the attentional system of human beings which specializes in the detection and frequent re-inspection of animal stimuli. Drawing on the available findings and theories regarding the inhibition-of-return effect, the present study utilized several variants of the spatial cueing paradigm to test the two main predictions of animate monitoring hypothesis：（1） animal stimuli in the environment are capable of summon attention in a reflexive way; （2） the inhibitory effect of attentional process on animal stimuli is less pronounced when compared to stimuli of other categories. The results of the present study provide supportive evidence to the existence of a category-specific module for animals in the attentional system. The present study contributes to the further understanding of the important role played by attentional mechanism in solving the critical adaptive problem faced by ancestral human beings during the course of evolution.

Analysis of mitochondrial DNA variants in Japanese patients with schizophrenia

To test the hypothesis that mitochondrial DNA (mtDNA) variants contribute to the susceptibility to schizophrenia, we sequenced the entire mtDNAs from 93 Japanese schizophrenic patients. Three non-synonymous homoplasmic variants in subunit six of the ATP s

Photodegradation dynamics of pure microcystin variants with illumination of fixed wavelength UV-lights

Photolysis of microcystins by UV irradiation and the effects of different environmental factors on efficiency of UV degradation were studied. The results indicated that the rates of the photolytical degradation reactions of microcystin-LR and RR-follow pseudo-first-order kinetic process. The results also showed that the concentrations of two microcystin variants decreased significantly by UV-C Irradiation; the wavelength and intensitiy of UV irradiation are two very important factors affecting the rate of degradation; temperature and pH value could also affect the half life of degradation rates. When irradiated by weaker UV-Iight, isomerization could be detected in the course of photolytical degradation. The concentrations of two isomers transformed from microcystin-LR reached its maximum at the third minute and decreased with the time afterwards. To simulate photolysis of microcystins in the field water body, microcystins with low concentration were used. It was found that UV-C illumination was capable of decomposing over 95% of microcystins within 40 min. In the presence of humic substances the photodecomposition slowed down to a certain extent. These results are valuable in using UV irradiation for elimination microcystins from raw water.

Screening of salt tolerant watercress variants on natural seawater contained medium

The responses of stem segments of watercress (Nasturtium officinale R. Br.) to 6-BA,NAA and 2,4-D were studied. MS medium supplemented with 2.0 mg/L 6-BA, 0.2 mg/L 2,4-D was used for callus initiation and maintenance. MS medium supplemented with 4.0 mg/L 6-BA was suitable for plant regeneration and MS medium without plant hormone supplement was used for rooting and plant propagation. For screening of salt tolerant calli, stem segments of watercress were plated onto callus initiation medium containing 1/3 natural seawater. Seventeen out of the 325 plated explants produced calli. The growth curves demonstrated that the growth rate of salt-tolerant calli on saline medium almost matched that of the control calli on normal medium. Some of the salt-tolerant calli were transferred to the normal regeneration medium or saline regeneration medium to induce plant regeneration. In the first case, buds and shoots were regenerated in the same way as those of control calli on normal regeneration medium. More than 1 000 regenerated shoots were obtained of which 83 regenerated shoots were cut and transferred to saline MS base medium. At first, all shoot growth was inhibited, but 40 days after the transfer, rapid-growing axillary shoots were observed on 16 of the original shoots but none on the control shoots on saline MS base medium. Moreover, green spots appeared on most calli 10 days after they were transferred to saline medium, however buds appeared only on 5 calli from the 30 transferred calli and at the end only 2 rapid-growing shoots were obtained from two calli. In total, 18 variant lines were obtained through. propagation of the salt-tolerant shoots on saline MS base medium. RAPD analysis was performed in 10 of the 18 salt-tolerant variant lines and DNA variation was detected in all the tested variant lines.