Evolution of genome organizations of squirrels (Sciuridae) revealed by cross-species chromosome painting

With complete sets of chromosome-specific painting probes derived from flow-sorted chromosomes of human and grey squirrel (Sciurus carolinensis), the whole genome homologies between human and representatives of tree squirrels (Sciurus carolinensis, Callosciurus erythraeus), flying squirrels (Petaurista albiventer) and chipmunks (Tamias sibiricus) have been defined by cross-species chromosome painting. The results show that, unlike the highly rearranged karyotypes of mouse and rat, the karyotypes of squirrels are highly conserved. Two methods have been used to reconstruct the genome phylogeny of squirrels with the laboratory rabbit (Oryctolagus cuniculus) as the out-group: ( 1) phylogenetic analysis by parsimony using chromosomal characters identified by comparative cytogenetic approaches; ( 2) mapping the genome rearrangements onto recently published sequence-based molecular trees. Our chromosome painting results, in combination with molecular data, show that flying squirrels are phylogenetically close to New World tree squirrels. Chromosome painting and G-banding comparisons place chipmunks ( Tamias sibiricus), with a derived karyotype, outside the clade comprising tree and flying squirrels. The superorder Glires (order Rodentia + order Lagomorpha) is firmly supported by two conserved syntenic associations between human chromosomes 1 and 10p homologues, and between 9 and 11 homologues.

Karyotypic evolution of the family Sciuridae: inferences from the genome organizations of ground squirrels

Cross- species chromosome painting has made a great contribution to our understanding of the evolution of karyotypes and genome organizations of mammals. Several recent papers of comparative painting between tree and flying squirrels have shed some light

Influence of capping ligands on the self-organizations of gold nanoparticles into superlattice from CTAB reverse micelles

Gold nanoparticles with size 3-10 nm (diameter) were prepared by the reduction of HAuCl4 in a CTAB/octane + 1-butanol/H2O reverse micelle system using NaBH4 as the reducing agent. The as-formed gold nanoparticle colloid was characterized by UV/vis absorption spectrum and transmission electron microscopy(TEM). Various capping ligands, such as alkylthiols with different chain length and shape, trioctylphosphine (TOP), and pyridine are used to passivate the gold nanoparticles for the purpose of self-organization into superstructures. It is shown that the ligands have a great influence on the self-organization of gold nanoparticles into superlattices, and dodecanethiol C12H25SH is confirmed to be the best ligand for the self-organization. Self-organization of C12H25SH-capped gold nanoparticles into 1D, 2D and 3D superlattices has been observed on the carbon-coated copper grid by TEM without using any selective precipitation process.