Robust Tensor Analysis With L1-Norm

Tensor analysis plays an important role in modern image and vision computing problems. Most of the existing tensor analysis approaches are based on the Frobenius norm, which makes them sensitive to outliers. In this paper, we propose L1-norm-based tensor analysis (TPCA-L1), which is robust to outliers. Experimental results upon face and other datasets demonstrate the advantages of the proposed approach.

L1-Norm-Based 2DPCA

In this paper, we first present a simple but effective L1-norm-based two-dimensional principal component analysis (2DPCA). Traditional L2-norm-based least squares criterion is sensitive to outliers, while the newly proposed L1-norm 2DPCA is robust. Experimental results demonstrate its advantages.

表面相关多次波衰减方法与应用研究

The function of seismic data in prospecting and exploring oil and gas has exceeded ascertaining structural configuration early. In order to determine the advantageous target area more exactly, we need exactly image the subsurface media. So prestack migration imaging especially prestack depth migration has been used increasingly widely. Currently, seismic migration imaging methods are mainly based on primary energy and most of migration methods use one-way wave equation. Multiple will mask primary and sometimes will be regarded as primary and interferes with the imaging of primary, so multiple elimination is still a very important research subject. At present there are three different wavefield prediction and subtraction methods: wavefield extrapolation; feedback loop; and inverse-scattering series. I mainly do research on feedback loop method in this paper. Feedback loop method includs prediction and subtraction.Currently this method has some problems as follows. Firstly, feedback loop method requires the seismic data used to predict multiple is full wavefield data, but usually the original seismic data don’t meet this assumption, so seismic data must be regularized. Secondly, Multiple predicted through feedback loop method usually can’t match the real multiple in seismic data and they are different in amplitude, phase and arrrival time. So we need match the predicted multiple and that in seismic data through estimating filtering factors and subtract multiple from seismic data. It is the key for multiple elimination how to select a correct matching filtering method. There are many matching filtering methods and I put emphasis on Least-square adaptive matching filtering and L1-norm minimizing adaptive matching filtering methods. Least-square adaptive matching filtering method is computationally very fast, but it has two assumptions: the signal has minimum energy and is orthogonal to the noise. When seismic data don’t meet the two assumptions, this method can’t get good matching results and then can’t attenuate multiple correctly. L1-norm adaptive matching filtering methods can avoid these two assumptions and then get good matching results, but this method is computationally a little slow. The results of my research are as follows: 1. Proposed a method that interpolates seismic traces based on F-K migration and demigration. The main advantage of this method is that it can interpolate seismic traces in any offsets. It shows this method is valid through a simple model. 2. Comparing different Least-square adaptive matching filtering methods. The results show that equipose multi-channel adaptive matching filtering methods can get better results of multiple elimination than other matcing methods through three model data and two field data. 3. Proposed equipose multi-channel L1-norm adaptive matching filtering method. Because L1-norm is robust to large amplitude differences, there are no assumption on the signal has minimum energy and orthogonality, this method can get better results of multiple elimination. 4. Research on multiple elimination in inverse data space. The method is a new multiple elimination method and it is different from those methods mentioned above.The advantages of this method is that it is simple in theory and no need for the adaptive subtraction and computationally very fast. The disadvantage of this method is that it is not stabilized in its solution. The results show that equipose multi-channel and equipose pesudo-multi-channel least-square matching filtering and equipose multi-channel and equipose pesudo-multi-channel L1-norm matching filtering methods can get better results of multiple elimination than other matcing methods through three model data and many field data.

A 5.6-mW Power Dissipation CMOS Frequency Synthesizer for L1/L2 Dual-Band GPS Application

This paper presents a wide tuning range CMOS frequency synthesizer for dual-band GPS receiver, which has been fabricated in a standard 0.18-um RF CMOS process. With a high Q on-chip inductor, the wide-band VCO shows a tuning range from 2 to 3.6GHz to cover 2.45GHz and 3.14GHz in case of process corner or temperature variation, with a current consumption varying accordingly from 0.8mA to 0.4mA, from a 1.8V supply voltage. The measurement results show that the whole frequency synthesizer costs a very low power consumption of 5.6mW working at L I band with in-band phase noise less than -82dBc/Hz and out-of-band phase noise about -112 dBc/Hz at 1MHz offset from a 3.142GHz carrier.

重庆西山坪西园建材厂滑坡应急抢险治理工程设计与研究

以西山坪西园建材厂滑坡体工程地质勘察资料为依据,分析了滑坡体的岩土组成和物理力学性质以及造成滑坡的原因.认为影响山体滑坡的因素除与边坡地层岩性、微地貌特征、气象及水文条件有关外,修建厂房开挖与切割边坡坡脚则是重要的诱发原因.定性得出该滑坡的形成机制和类型为牵引式、浅层、小型土质新型滑坡.在此基础上,应用规范所推荐的极限平衡法,对该滑坡体的3个主要地质剖面(A-A'、B-B'、C-C')进行了稳定性计算与分析,得到不同工况下滑坡体稳定系数值.其中,在最不利组合工况(自重+暴雨+地震)下,滑坡体稳定系数仅为0.99～1.03,处于不稳定状态.根据计算结果,按照<长江三峡库区滑坡灾害防治规范>要求及"技术可行、安全可靠、经济合理、简单易实施"的设计原则,对该滑坡的应急抢险方案进行了设计,提出以抗滑桩拦挡工程为主、坡顶修筑截排水沟、地表裂缝回填夯实等综合治理方案.抗滑桩设置1排,分3段,根据每段不同的剩余下滑力设计抗滑桩的断面尺寸和埋设深度,使该滑坡体治理后,其安全系数分别满足不同工况下的规范要求.该方案已通过了三峡库区滑坡灾害防治专家组的审核,目前,正处于实施阶段.

Effects of rainfall infiltration on deep slope failure

With the finite element method and the limit equilibrium method, a numerical model has been estab-lished for examining the effects of rainfall infiltration on the stability of slopes. This model is able to reflect the variations in pore water pressure field in slopes, dead weight of the soil, and soil softening caused by rainfall infiltration. As a case study, an actual landslide located at the Nongji Jixiao in Chongqing was studied to analyze the effects of rainfall infiltration on the seepage field and slope sta-bility. The simulated results showed that a deep slope failure is prone to occur when rainfall infiltration leads to a remarkable variation in the seepage field, especially when the pore water pressure in slopes increases in a large range.

高桩码头不均匀沉降模型实验与数值模拟

以使用5年以上的高桩码头的大管桩为研究对象,采用模型实验的方法对大管桩的不均匀沉降进行了系统研究.首先通过量纲分析,确定模型实验的各个物理量和相关参数,以及模型材料(PVC管)等;然后利用电测技术,经过大量实验,获得大管桩的不均匀沉降量和变化规律;同时,利用数值模拟,分析了大管桩不均匀沉降变化规律,验证了模型实验结果的可靠性,说明了利用数值模拟方法分析大管桩不均匀沉降是可行的.

Effect of oxygen substitution by halide ions on structure, thermal stability and upconversion fluorescence in Er3(+)/Yb3(+)-codoped germanium-bismuth glasses

For the first time. effect of halide ions (F-, Cl-, Br-, and I-) introduction on structure, thermal stability, and upconversion fluorescence in Er3+/Yb3+-codoped oxide-halide germanium-bismuth glasses has been systematically investigated. The results show that halide ions modified germanium-bismuth glasses have lower maximum phonon energy and phonon density, worse thermal stability. longer measured lifetimes of I-4(l1/2) level, and stronger upconversion emission than germanium-bismuth glass. All these results indicate that halide ions play an important role in the formation of glass network, and have an important influence on the upconversion luminescence. The possible upconversion mechanisms of Er3+ ion are also evaluated. © 2005 Elsevier Ltd. All rights reserved.

异质性环境中两种匍匐茎草本植物的克隆可塑性

　　克隆植物常常生长在资源异质性分布的环境中，克隆植物特有的生活史特征使其对环境和资源变化产生的反应规范（Reaction norm）具有特殊的表现和适应意义。本文以匍匐茎草本植物蛇莓(Duchesnea indica)和活血丹(Glechoma longituba)为材料，研究克隆植物在不同异质性环境中的反应规范，即可塑性（plasticity）和克隆分株间相互作用（即克隆整合（clonal integration））对表型的影响及其适应意义。 蛇莓和活血丹是具有不同分枝类型的两种匍匐茎草本植物。对于匍匐茎草本植物而言，生境中光资源分布在时间和空间上的变化极为丰富。本文主要研究在不同环境中，这两种克隆植物克隆分株间的相互作用是如何通过影响其形态特征，从而影响其光资源获取策略。 实验涉及了4种光照条件，分为5个部分，分别在大棚和野外进行。 1．同质光环境中蛇莓和活血丹克隆片段的可塑性 在大棚中，将整个克隆片段（clonal fragment）都放置在光照强度分别为自然光照PPFD（Photosynthetic Photon Flux Density）的100％、50％和10％三种不同的同质光环境中，目标是通过比较不同光照强度同质环境中不同基因型的形态特征，揭示匍匐茎草本克隆植物的反应规范及遗传差异。实验结果发现，当光照强度从100% PPFD 降到 50% PPFD时，活血丹增加对地上部分生物量投资，增加部分多投入到匍匐茎上，用于支持匍匐茎实现觅食行为，叶片和叶柄的变化不大。同样条件下，蛇莓的生物量投资却向根部转移，地上部分叶片和叶柄形态上的变化比匍匐茎的形态变化显著，出现增强对光资源吸收能力的变化。当光照强度从50%降到 10%时，活血丹继续增加对地上部分的生物量投资，但由于光照强度弱，几乎不足以维持新的匍匐茎的发生，所有增加的生物量部分都投入到叶片和叶柄的变化上。这种条件下，蛇莓的生物量投资依然向根部转移，叶片和叶柄为增加对光资源吸收能力而发生了相应变化，匍匐茎的新增数减少，形态变化也不大。实验证明，可能由于匍匐茎的发生方式不同，活血丹的匍匐茎节间长度，叶片和叶柄的关联程度比蛇莓相应性状的关联程度强。不同基因型的蛇莓和活血丹对光照梯度的反应有显著差异。 2．异质光环境中蛇莓克隆片段的可塑性 针对克隆植物分株间在相当长的时间里形体相连，而环境异质性可能存在于分株大小的空间尺度，设置异质环境，将蛇莓的不同相连分株放置在不同的光资源斑块中，研究其整合作用在适应异质性环境过程中的作用及其对表型的影响。首先设置同一种资源（光资源）的梯度差异斑块。 在光斑块中，整合作用发生与否、作用方式与资源梯度、分株自身所处斑块的资源条件和分株的年龄结构有关。在不同的条件下，整合作用可能造成对表型的不同影响，从而可能加剧或削弱分株对本地资源的反应（局部反应，local response）。整合作用对分株局部反应的影响强度和方向，在不同基因型间存在明显差异。这些基因型间的差异暗示，整合作用可能也是具有遗传基础的一种独立性状。 3．光块斑和养分斑块共存环境中活血丹克隆片段的可塑性 设置光和养分的资源互补性斑块。将相连分株种植在不同斑块中。当生长在高光低养斑块中的分株与其互补斑块（低光高养斑块）的分株相连时，其适合度相关性状的值增加，根冠比是可塑的，通过相应的形态变化，高光照斑块中的分株捕获光资源的能力增强，但两种斑块中植株的吸收养分的能力却没有大的变化。收益－损耗分析显示整合作用有益于异质环境中的植株，低光高养斑块中植株的生物量获益。实验结果证明了异质环境中相连分株间存在光合产物和养分传递。在这种环境种，分株形态的变化对本地斑块发生趋富反应，形态的改变有助于对本地丰富资源的吸收。这种反应有利于克隆片段对资源的吸收。 4．野外环境中蛇莓克隆片段的可塑性 基于大棚实验资料，对野外林下蛇莓种群进行监测。首先对单株在林下复杂的光环境中的表现进行了跟踪，结果发现，随着分株数目的增加，适合度相关性状值有所提高，而处于不同位置的相连分株在形态上的差异不显著。大棚实验中发现的显著形态变化在具有显著差异的自然环境条件下没有发生，这可能暗示着在资源条件变化频率较高的环境中整合作用的作用方式。分株不是对某一时刻资源条件进行形态特化，而是通过对所扩展的总体区域的总的环境条件调整表型。这样，从克隆片段的水平上看，资源的吸收可能达到较高水平。在密度增大，植株间互相荫蔽使得光照减弱的情况下，匍匐茎的变化没有表现出觅食行为，叶片和叶柄出现增大增长等增强吸收光能力的相应表型变化，证明叶片叶柄是克服光照不足的主要器官。这些结果与大棚实验结果一致。蛇莓基株对于相连分株内部可能具有密度调节功能，从而通过减弱叶片增大的趋势，增长匍匐茎，分散新生分株，使密度保持在一定程度，不对种群的发展造成阻碍作用。非相连分株间随着密度的增大，相互间的作用方式类似于非克隆植物：出现叶片增大，叶柄增长的现象，同时密度制约了适合度相关性状如分株数目等的增加。 5．野外环境中蛇莓种群格局动态 最后，在进化的单位，种群水平上对蛇莓种群在自然界的动态进行了调查。Spearman相关分析，没有发现光资源和测量指标在量上的相关。在自然界中整合作用使大量分散分布、相互连接的分株相互作用，以促进基株对资源的获取。Moran’s I指数分析显示，随时间的推进，各个指标在相关尺度上有所增加。这暗示了整合作用的存在，分株间联系的加强。大棚实验中观察到的关于各个器官的作用的结论在自然界中得到进一步的验证。蛇莓匍匐茎在遮荫环境中不是作为觅食器官。为了争取对更多光资源的吸收，蛇莓在叶片数和叶形态上发生改变。对分株数、叶片数、匍匐茎数目的分布格局的调查显示出没有一定的规律性，而且处于不断的变化中。这一结果可能暗示种群发展过程中处理异质性分布资源的对策的变化。 此外，本文还揭示了可塑性和整合作用在基因型间的差异，针对所发现的现象，从作用的遗传机制上对可塑性及其适应意义进行了讨论。结合分子生物学和地统计学等学科的研究成果，对进一步的实验提出了方法和路线。

家畜放牧对典型草原土壤-植被系统氮素转化的影响

草地生态系统中，放牧对调节物质流动和营养循环起着关键的作用。内蒙古地区已有上千年的游牧历史，放牧是该地区重要的草地利用方式之一。然而，近50年来，由于人口的剧增以及对草原的不合理利用与管理，使得内蒙古草原发生了严重的退化与沙漠化。理解放牧对氮循环的定量影响，对我们更合理地利用草地、防治生态系统的进一步退化以及探求最佳恢复途径都具有重要的意义。中国科学院内蒙古草原生态系统定位站精准设置的5种放牧强度处理（0.00, 1.33, 2.67, 4.00, 5.33 羊/公顷）为我们的研究提供了理想的平台。2005、2006年生长季期间，在经过16年不同放牧强度处理的一个典型草原样地上，我们测定了氮素输入（氮沉降、生物固氮）、转化（净氮矿化）、输出（反硝化及氨气挥发）速率等N循环的重要参量。同时，测定了微生物生物量碳、氮（Cmic，Nmic）及微生物呼吸（Rmic），研究了微生物在氮循环中的作用。另外，还测定了植物、土壤、固氮体中的15N自然丰度值，探讨了其对不同放牧强度的响应格局与机理。 结果表明，干湿混合沉降物全氮浓度最高达11.53 mg N l–1，沉降量最高为1.77 kg N ha–1m–1。月均氮沉降量与浓度正相关，它们与降水量均关系密切，前者更密切。结皮面积所占比例很小，不超过8%。结皮含氮量为1.01-1.43 g N kg–1，受放牧的影响不显著，但随放牧强度的增加有降低的趋势。土壤结皮能固氮，但固氮量不超过土壤氮含量的1倍。地耳的固氮量为结皮的10-20倍，故是主要的固氮体。尽管地耳含氮量受放牧影响不显著，但放牧是不放牧条件下地耳氮含量的1.58倍。 土壤NH4+-N浓度随季节变化范围为1.71-9.45 µg N g–1，它们在各放牧处理之间的差异不显著。土壤NO3–-N浓度变幅为0.27-11.21 µg N g–1。总无机氮浓度在不放牧条件下的变幅为2.69-14.57 µg N g–1，占总氮的0.49-2.6%;放牧条件下的变幅为2.49-8.66 µg N g–1，占总氮的0.35-1.21%。总无机氮浓度随季节和放牧强度的变化趋势与硝态氮相似，表现为2005年夏季期间有逐渐增加的趋势，而在2006年整个生长季期间有逐渐降低的趋势。不放牧比放牧条件下含氮量高，但在4个放牧处理之间的差异不显著。净氮矿化速率的变幅为–0.61-0.27 µg N g–1d–1，峰值通常出现在7月。净氮矿化速率在各处理间没有一致性差异，但中牧（2.67、4.00 羊/公顷）通常比重牧（5.33 羊/公顷）下的值高。净氮硝化速率通常很低，波动在–0.32-0.16 µg N g–1之间，2005年夏季及2006年春秋季的值相对较高。净氮硝化速率在各放牧处理之间差异不显著，但重牧条件下的值通常最低。累积净氮转化量在年际间差异大，2005年总体上遵循正态分布模式，而2006年随着放牧强度的增加有直线下降的趋势，2006年比2005年的累积量高。土壤温度和湿度比放牧强度对净氮矿化的影响更加显著。放牧强度通过调节这两个土壤因子对氮动态而产生间接影响。 反硝化和N2O的释放速率低，前者变幅为0.33-6.21µg N kg–1 d–1，后者为0.42-11.28 µg N kg–1 d–1。释放量夏季较强，春秋较弱。放牧对反硝化释放影响不显著，只在2005年对N2O释放影响显著。尽管如此，反硝化和N2O释放速率整体表现出在不放牧比放牧条件下高的趋势，且比最高放牧强度5.33 羊/公顷下的反硝化速率显著高。然而，它们在4个放牧处理之间的差异始终不显著。累积反硝化和N2O释放存在年际变化，2006年的值显著高。它们随着放牧强度的递增有逐渐降低的趋势，这在2006年表现得尤为明显，这种结果主要归因于土壤总氮量在长期放牧条件下随放牧压力的增加而逐渐降低。 氨气挥发速率变幅为0.88-3.52 g N ha–1d–1，高峰值出现在5月，2005比2006年同期的速率大。两年间放牧强度对氨气挥发的影响都较弱，2005年影响更弱。不放牧条件下的氨气挥发量通常最低，这在生长季的前期表现得更为明显，中牧及重牧条件下通常最高。放牧能影响氨气挥发与氨态氮，硝态氮及总无机氮浓度之间的关系，即不放牧条件下相关性显著，而放牧条件下相关性不显著。年际间氨气挥发速率与无机氮浓度之间的关系趋势相反，2005年负相关，2006年正相关。在水分充足的2006年，所有处理条件下氨气挥发与土壤水分及温度之间显著相关，但在单独每个放牧处理下，相关性不显著。 Cmic变幅大，为13.97-350.45 μg C g–1，占土壤总有机碳的1.58-8.35%。最高和最低值分别出现在夏季和春季。它们在各处理间差异不显著，不放牧下的值相对偏高。Cmic与土壤有机C和全N、前期的立枯、凋落量及含N量、优势种前期的地上生物量、根系生物量、土壤温度以及水分之间关系密切。氮素状态如氨态氮、总无机氮含量、反硝化以及N2O释放速率，氨气挥发速率与Cmic之间关系密切。Nmic占土壤全氮的0.41-2.74%，不受季节和放牧强度的显著影响。Nmic与可溶性N，表土层根系全N，立枯有机C，地上生物量之间关系密切。氮循环过程中氨气挥发速率受Nmic的影响。Rmic随季节而变化，通常5月份值最高。Rmic随着放牧强度的增加有稍降低的趋势。Rmic与土壤可溶性C、有机C，不同土层根系有机C，凋落物、立枯量及其C、N含量、全N，地上生物量，优势种前期的生物量，土壤温度之间关系密切。土壤氮循环动态如氨态氮、硝态氮、总无机氮浓度及反硝化速率与Rmic之间关系密切。 土壤、植物、地耳、生物结皮的δ15N值与放牧强度之间相关关系不显著。然而，放牧有增加表层土和植物的δ15N值而降低表土、地耳、结皮的δ15N值的趋势。表层土δ15N值与前一年生长季末期硝态氮及总无机氮浓度，反硝化速率及累积氨气挥发之间密切相关。 土壤碳含量的变幅为10.44-17.19 g C kg–1，全氮量的变幅为0.54-0.82 g N kg–1。长期的高强度放牧降低了土壤碳、氮储量。根系碳、氮含量分别为土壤碳、氮含量的40-50和10倍。立枯和凋落物有机碳含量变幅为446.94-507.01 g C kg–1，与放牧强度之间关系不密切;氮含量变幅为4.58-7.18 g N kg–1，与放牧强度之间显著负相关。优势种木地肤、冷蒿的含碳量与放牧强度之间相关不显著，但含氮量与之显著相关。 综述以上结果，不同放牧强度对内蒙草地生态系统氮循环中不同过程产生影响的程度各不相同，这种影响主要是通过它与土壤环境因子如温度、水分的联合作用而间接产生。

武汉月湖和莲花湖表层沉积物中持久性有机物的污染状况

采用气-质联用技术分析了武汉汉阳月湖和莲花湖的4个表层沉积物样品中的有机污染物,探讨了两湖沉积物受持久性有机物污染的程度。月湖中共检测出124种有机物,其中属环境优先控制污染物和美国EPA筛选的内分泌干扰物19种;莲花湖中共检测出186种有机物,环境优先控制污染物和美国EPA筛选的内分泌干扰物34种。主要污染物包括:酞酸酯、酯类、酚类、杂环和苯及其衍生物等。污染物浓度顺序为L1>L2>Y2>Y1,莲花湖中有机物浓度明显高于月湖。两湖邻苯二甲酸酯的含量最高,占了污染物总量的96%～98%,邻苯二甲酸乙基己基

Short and long peptidoglycan recognition proteins (PGRPs) in zebrafish, with findings of multiple PGRP homologs in teleost fish

Peptidoglycan recognition protein (PGRP) specifically binds to peptidoglycan and is considered to be one of the pattern recognition proteins in the innate immunity of insect and mammals. Using a database mining approach and RT-PCR, multiple peptidoglycan recognition protein (PGRP) like genes have been discovered in fish including zebrafish Danio rerio, Japanese pufferfish TakiFugu rubripes and spotted green pufferfish Tetraodon nigroviridis. They share the common features of those PGRPs in arthropod and mammals, by containing a conserved PGRP domain. Based on the predicted structures, the identified zebrafish PGRP homologs resemble short and long PGRP members in arthropod and mammals. The identified PGRP genes in T. nigroviridis and TakiFugu rubripes resemble the long PGRPs, and the short PGRP genes have not been found in T. nigroviridis and TakiFugu rubripes databases. Computer modelling of these molecules revealed the presence of three alpha-helices and five or six beta-strands in all fish PGRPs reported in the present study. The long PGRP in teleost fish have multiple alternatively spliced forms, and some of the identified spliced variants, e.g., tnPGRP-L3 and tnPGRP-L4 (in: Tetraodon nigroviridis), exhibited no characters present in the PGRP homologs domain. The coding regions of zfPGRP6 (zf: zebrafish), zfPGRP2-A, zfPGRP2-B and zfPGRP-L contain five exons and four introns; however, the other PGRP-like genes including zfPGRPSC1a, zfPGRPSC2, tnPGRP-L1-, tnPGRP-L2 and frPGRP-L (fr: Takifugu rubripes) contain four exons and three introns. In zebrafish, long and short PGRP genes identified are located in different chromosomes, and an unknown locus containing another long PGRP-like gene has also been found in zebrafish, demonstrating that multiple PGRP loci may be present in fish. In zebrafish, the constitutive expressions of zfPGRP-L, zfPGRP-6 and zfPGRP-SC during ontogeny from unfertilized eggs to larvae, in different organs of adult, and the inductive expression following stimulation by Flavobacterium columnare, were detected by real-time PCR, but the levels and patterns varied for different PGRP genes, implying that different short and long PGRPs may play different roles in innate immune response. (c) 2007 Elsevier Ltd. All rights reserved.

Purification and characterization of hydrosoluble components from the sap of Chinese lacquer tree Rhus vernicifera

Continuous gradient elution chromatography (CGEC) was employed to purify and separate enzymes and polysaccharides from the sap of Rhus vernicifera Chinese lacquer tree. There are three different molecules with laccase enzyme activity. Two are enzymes of each other (L1, and L2), whereas the third (RL) is an entirely separate entity. Two polysaccharides (GP1 and GP2) were also found. The Rhus laccase (RL), and isoenzymes L1 and L2, have peak molecular masses of 109,100, 120,000, 103,000 respectively; each has four copper atoms per molecule, and the pI values were 8.2, 8.6, and 9.1, respectively. The structure of the laccases was studied by Fourier-transform infrared (FT-IR) and Matrix-assisted laser desorption/ionization time-of flight (MALDI-TOF) mass spectrometry. The typical amide I (1646 cm(-1)) and amide II (1545 cm(-1)) bands were observed. The results from MALDI-TOF were similar to those from CGEC, but the molecular mass from the MALDI-TOF was significantly different from that obtained from sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). (c) 2006 Elsevier B.V. All rights reserved.

Characterization of cDNA encoding immunoglobulin light chain of the Mandarin fish (Siniperca chuatsi)

Immunoglobulin light chain cDNA sequences of a perciform fish, the mandarin fish Siniperca chuatsi were amplified from head kidney mRNA by reverse transcription (RT)-PCR and RACE methods using degenerated primer and gene specific ones. In cDNA sequences of the VL region, nucleotide exchanges were present mainly within CDRs, although a lesser degree of variability was also found in FRs. Moreover, the length of CDRI and CDR3 in the mandarin fish is shorter than in most other fish species. In the middle of S. chuatsi CL region, a microsatellite sequence (AGC)(6-8) was found, which is also present in another perciform species, the spotted wolffish (Anarhichas minor). The comparison of amino acid sequence of the mandarin fish CL domain with those of other vertebrates showed the highest degree of similarity of 94.5% to the spotted wolffish, while the similarity with rainbow trout (Oncorhynchus mykiss) Ig L1 (62.7%) and channel catfish (Ictalurus punctatus) Ig LG (55.9%) isotypes is also higher. However, there is only 50% identity in the VL regions between the mandarin fish and the wolffish. The sequence similarity of the mandarin fish CL domain with those of higher vertebrate did not readily allow it to be classified as kappa or lambda isotype. The phylogenetic analyses also demonstrated that the CL genes of the mandarin fish and most other teleost fish cluster as a separate branch out of the mammal kappa and lambda branches. (C) 2003 Elsevier B.V. All rights reserved.