Genetic diversity and divergence in Chinese yak (Bos grunniens) populations inferred from blood protein electrophoresis

In 6 Chinese yak (Bos. grunniens) populations including 177 yaks, 34 blood protein loci were studied by horizontal starch gel electrophoresis, four of these loci (AKP: ALB, LDH-1, TF) were found to be polymorphic. The percentage of polymorphic loci(P) is 0.118, the mean individual heterozygosity(H) is 0.015, which means a low level of genetic diversity in the whole Chinese yak population. The coefficient of gene differentiation (G(ST)) is 0.0625, which indicated an almost-indistinguishable divergence among different populations at the level of blood protein electrophoresis.

Polymorphism in mitochondrial DNA (mtDNA) of yak (Bos grunniens)

Mitochondrial DNAs (mtDNA) from 21 yaks (Bos grunniens) were assayed for restriction fragment length polymorphisms by using 20 restriction endonucleases, six of which (AvaI, AvaII, BglII, EcoRI, HindIII, and HpaI) detected polymorphism. Four different mtD

New insights into the karyotypic relationships of Chinese muntjac (Muntiacus reevesi), forest musk deer (Moschus berezovskii) and gayal (Bos frontalis)

To investigate the karyotypic relationships between Chinese muntjac (Muntiacus reevesi), forest musk deer (Moschus berezovskii) and gayal (Bos frontalis), a complete set of Chinese muntjac chromosome-specific painting probes has been assigned to G-banded chromosomes of these three species. Sixteen autosomal probes (i.e. 6-10, 12-22) of the Chinese muntjac each delineated one pair of conserved segments in the forest musk deer and gayal, respectively. The remaining six autosomal probes (1-5, and 11) each delineated two to five pairs of conserved segments. In total, the 22 autosomal painting probes of Chinese muntjac delineated 33 and 34 conserved chromosomal segments in the genomes of forest musk deer and gayal, respectively. The combined analysis of comparative chromosome painting and G-band comparison reveals that most interspecific homologous segments show a high degree of conservation in G-banding patterns. Eleven chromosome fissions and five chromosome fusions differentiate the karyotypes of Chinese muntjac and forest musk deer; twelve chromosome fissions and six fusions are required to convert the Chinese muntjac karyotype to that of gayal; one chromosome fission and one fusion separate the forest musk deer and gayal. The musk deer has retained a highly conserved karyotype that closely resembles the proposed ancestral pecoran karyotype but shares none of the rearrangements characteristic for the Cervidae and Bovidae. Our results substantiate that chromosomes 1-5 and 11 of Chinese muntjac originated through exclusive centromere-to-telomere fusions of ancestral acrocentric chromosomes. Copyright (C) 2005 S. Karger AG, Basel.

Hypoxia-inducible factor 1 alpha cDNA cloning and its mRNA and protein tissue specific expression in domestic yak (Bos grunniens) from Qinghai-Tibetan plateau

Adaptation to hypoxia is regulated by hypoxia-inducible factor 1 (HIF-1), a heterodimeric transcription factor consisting of an oxygen-regulated a-subunit and a constitutively expressed beta-subunit. How animals living on Qinghai-Tibetan plateau adapt to the extreme hypoxia environment is known indistinctly. In this study, the Qinghai yak which has been living at 3000-5000 m attitude for at least two millions of years was selected as the model of high hypoxia-tolerant adaptation species. The HIF-1 alpha ORFs (open reading frames) encoding for two isoforms of HIF-1 alpha have been cloned from the brain of the domestic yak. Its expression of HIF-1 alpha was analyzed at both mRNA and protein levels in various tissues. Both its HIF-1 alpha mRNA and protein are tissue specific expression. Its HIF-1 alpha protein's high expression in the brain, lung, and kidney showed us that HIF-1 alpha protein may play an important role in the adaptation to hypoxia environment. (c) 2006 Elsevier Inc. All rights reserved.

Assessment of cattle genetic introgression into domestic yak populations using mitochondrial and microsatellite DNA markers

Hybridization between yak Poephagus grunniens and taurine Bos taurus or indicine B. indicus cattle has been widely practiced throughout the yak geographical range, and gene flow is expected to have occurred between these species. To assess the impact of cattle admixture on domestic yak, we examined 1076 domestic yak from 29 populations collected in China, Bhutan, Nepal, India, Pakistan, Kyrgyzstan, Mongolia and Russia using mitochondrial DNA and 17 autosomal microsatellite loci. A cattle diagnostic marker-based analysis reveals cattle-specific mtDNA and/or autosomal microsatellite allele introgression in 127 yak individuals from 22 populations. The mean level of cattle admixture across the populations, calculated using allelic information at 17 autosomal microsatellite loci, remains relatively low (mY(cattle) = 2.66 +/- 0.53% and Q(cattle) = 0.69 +/- 2.58%), although it varies a lot across populations as well as among individuals within population. Although the level of cattle admixture shows a clear geographical structure, with higher levels of admixture in the Qinghai-Tibetan Plateau and Mongolian and Russian regions, and lower levels in the Himalayan and Pamir Plateau region, our results indicate that the level of cattle admixture is not significantly correlated with the altitude across geographical regions as well as within geographical region. Although yak-cattle hybridization is primarily driven to produce F-1 hybrids, our results show that the subsequent gene flow between yak and cattle took place and has affected contemporary genetic make-up of domestic yak. To protect yak genetic integrity, hybridization between yak and cattle should be tightly controlled.

Genetic diversity of cattle in South China as revealed by blood protein electrophoresis

Genetic variation of 31 blood protein loci in 236 cattle from eight South China populations (including mithan, Bos frontalis) and a Holstein population was investigated by means of horizontal starch gel electrophoresis. Thirteen loci (ALB, CAR, Hb-b, Np, PGM, Amy-I, PEP-B, AKP, 6PGD, Cp, Pa, EsD, and TF) were found to be polymorphic. The comparison of average heterozygosities (H) shows that all the native cattle embrace a rich genetic diversity Our results on protein polymorphism suggest that cattle in China originated mainly from Bos indicus and Bos taurus; Xuwen, Hainan, Wenshan, and Dehong cattle and the Dehong zebu are close to zebu-type cattle, and Diqing and Zhaotong cattle are close to the taurine. The mithan was very different from other native cattle, and we suggest that its origin was complicated and may be influenced by other cattle species.

Mitochondrial DNA variation in cattle of South China: origin and introgression

Ten restriction endonucleases were used to investigate the mitochondrial DNA restriction fragment length polymorphism (mtDNA RFLP) of 11 native cattle breeds and one cultivated cattle breed in South China. Twenty-three restriction morphs were detected, which can be sorted into five haplotypes, A phylogenetic tree of the haplotypes was constructed by using the 'upgma' method. Our study showed that haplotype I and II are identical to the zebu (Bos indicus) and taurine (Bos taurus) haplotypes, respectively. Zebu and taurine were the two major origins of cattle populations in South China, and the zebu probably had more influence on the native cattle population than taurine did. Haplotype III is identical to haplotype I of yak (Bos grunniens), which was only detected in the Diqing cattle breed. Haplotype IV was detected for the first time. This haplotype, found only in Dehong cattle, might be from an independent domestication event, probably from another Bos indicus population. Divergence of haplotypes I and IV occurred about 268,000-535 000 years ago, much earlier than the 10,000-year history of cattle husbandry. Our results also suggest a secondary introgression of mtDNA from yak to Diqing cattle.

Zebu Cattle Are an Exclusive Legacy of the South Asia Neolithic

Animal domestication was a major step forward in human prehistory, contributing to the emergence of more complex societies. At the time of the Neolithic transition, zebu cattle (Bos indicus) were probably the most abundant and important domestic livestock species in Southern Asia. Although archaeological evidence points toward the domestication of zebu cattle within the Indian subcontinent, the exact geographic origins and phylogenetic history of zebu cattle remains uncertain. Here, we report evidence from 844 zebu mitochondrial DNA (mtDNA) sequences surveyed from 19 Asiatic countries comprising 8 regional groups, which identify 2 distinct mitochondrial haplogroups, termed I1 and I2. The marked increase in nucleotide diversity (P < 0.001) for both the I1 and I2 haplogroups within the northern part of the Indian subcontinent is consistent with an origin for all domestic zebu in this area. For haplogroup I1, genetic diversity was highest within the Indus Valley among the three hypothesized domestication centers (Indus Valley, Ganges, and South India). These data support the Indus Valley as the most likely center of origin for the I1 haplogroup and a primary center of zebu domestication. However, for the I2 haplogroup, a complex pattern of diversity is detected, preventing the unambiguous pinpointing of the exact place of origin for this zebu maternal lineage. Our findings are discussed with respect to the archaeological record for zebu domestication within the Indian subcontinent.

Highly Functionalized Daphnane Diterpenoids from Trigonostemon thyrsoideum

Trigonothyrins A-C (1-3), which are highly functionalized daphnane diterpenoids, were isolated from the stems of Trigonostemon thyrsoideum. Compounds 1-3 represent the first examples of daphnanes with an oxygen-bridged four-membered-ring system, and a linkage mode of 12,13,14-orthoester. Compound 3 was observed to inhibit HIV-1 induced cytopathic effects. The EC50 value was 2.19 mu g/mL, and the therapeutic index (TI) was more than 90.

半野生大额牛的研究进展和保护利用现状

下载PDF阅读器大额牛(Bos frontalis)在我国又叫独龙牛,是一种半野生的珍稀牛种.本文较系统地介绍大额牛的起源、繁殖特点、生产性能与杂交利用、疾病调查、迁地保护、饲养管理等研究进展,提出我国独龙牛保护、利用中存在的问题及相应对策和建议.

蟾蜍皮肤活性蛋白与多肽的研究

近年来，我们致力于蟾蛛（Bufo andrewski）皮肤活性组份的研究，构建了缥蛛皮肤cDNA文库，检测了蟾蛛皮肤分泌液中多种生物活性，进一步纯化得到了四个新的生物活性蛋白：溶菌酶、抗爱滋病毒蛋白以及两个丝氨酸蛋粼酶抑制剂，并，简述如下；I、第三章报导了我们从蟾蛛皮肤分泌液中分离得到的一个谊薇酚犷杰女呱BA一娜"zym"）·BA一lvs"Zym"经5DS一PAGE检测为一条带，其分子量约为巧k珍。·它是一个高效的溶菌酶，每毫克蛋白的溶菌活性为2．7xl护俪ts，还能抑制革兰氏阳性菌（金黄色葡萄球菌Slaj，匆褚ococcusaureus）和革兰氏阴性菌（大肠杆菌Esch邵ichiacoli）生长，其最小抑菌浓度（MIC）分别为1．36拼M和84并M。使用PCR筛选法，我们从蟾蛛皮肤c溯A文库中克隆得到编码BA一lyso即me的cDNA序列。BA一lysozymeN末端测序和肤质量图谱确认了蛋白和基因的网一性。它的蛋白全序列与鸡溶菌酶的相似性为5氏5％。系统发育分析显示，与其最相似的是来源于海龟的溶菌酶。11、第四章介绍了我们从蟋蛛皮肤分泌液中分离得到的一个新的抗lllV蛋白，命名为BAS一AH。BAS一AH是一个分子量为63kD。的单链蛋白，每摩尔蛋白质含有0．89摩尔血红素辅基。BAS一AH对人T淋巴细胞系CS166细胞的毒性（CCS。）为9．5尽M。BAs一AH具有较强的抗HIV活性，它对HIV感染和复制具有剂量依赖抑制效应，其选择指数（CCso／Ecs。）分别为14．4和11．4·BAS一麟J也能抑制HIV的逆转录酶，其1C5（）为L32冬以。BAs一AH的N末端氨基酸为NA以KADvIGKIsILLGQDI』slvAAM，与己知的抗Hlv蛋白没有同源性·表明它可能是一个新的抗川v蛋自。BAs一AH没有检测到抗菌活性、蛋自酶水解活性、胰蛋自酶抑制剂活性、L一氨基酸氧化酶活性和过氧化氢酶活性。班、第五伞报导了我们通过离子交换、分子筛和反向层析，从蟾赊皮肤中分离得到的一个新的胰蛋白酶抑制剂，命名为BATI。BATI是一个单链糖蛋自·其分子量为22kD。。它是吵～个热稳定的竞争性的抑制剂，能有效抑制胰蛋自酶·其抑制常数凡为14nM。B灯I对凝血酶、弹性蛋白酶以及糜蛋白酶都没有抑制作用。BATI的N末端序列为El犯ITD，不同于其它物种来源的蛋白酶抑制剂。W、第六章介绍了蟾蛛皮肤分泌液中纯化得到的另外一个蛋白酶抑制剂（命名为baserpin）。与上述BATI不同的是，basel咖n不可逆地抑制多种蛋白酶。它是一个分子量约为60kDa的单链糖蛋白，除了能抑制胰蛋白酶，还能有效抑制糜蛋白酶和弹性蛋白酶。它抑制上述三种酶的二级反应常数（编）分别为4．6x1护M一，s一l、8．9》1护M一15一I以及6．8xl护M一ls一l。BaserPin是第一个来源于两栖类皮肤的不可逆抑制剂，其N末端氨基酸序列为HTQYPDILIAKPxDK，与其它物种来源的蛋白酶抑制剂不同。本论文综述了蟾蛛皮肤中的活性组份，报导了我们近年来研究蟾蛛皮肤活性蛋白与多肤的进展，分四章详细介绍了蟾蛛皮肤中纯化得到的四个活性蛋白。BA一lysozyme是两栖类动物中第一个得到蛋白质全序列的溶菌酶，能有效抑制革兰氏阳性菌和革兰氏阴性菌生长；BA象AH是一个含血红素辅基的抗HIV蛋白，其独特的理化性质和功能证明它是一个新的抗病毒蛋白。根据所鉴定的性质判断，BATI和bos仰in分别属于竞争性抑制剂和不可逆抑制剂。其中，base印in是第一个从两栖类皮肤中分离得到的不可逆抑制剂。

The cDNA cloning and mRNA expression of cytoplasmic Cu, Zn superoxide dismutase (SOD) gene in scallop Chlamys farreri

Cu, Zn superoxide dismutases (SODs) are rnetalloenzymes that represent one important line of defence against reactive oxygen species (ROS). A cytoplasmic Cu. Zn SOD cDNA sequence was cloned from scallop Chlamys farreri by the homology-based cloning technique. The full-length cDNA of scallop cytoplasmic Cu, Zn SOD (designated CfSOD) was 1022 bp with a 459 bp open reading frame encoding a polypeptide of 153 amino acids. The predicted amino acid sequence of CfSOD shared high identity with cytoplasmic Cu. Zn SOD in molluscs, insects, mammals and other animals, such as cytoplasmic Cu, Zn SOD in oyster Crassostrea sostrea gigas (CAD42722), mosquito Aedes aegypti (ABF18094), and cow Bos taurus (XP_584414). A quantitative reverse transcriptase real-time PCR (qRT-PCR) assay was developed to assess the mRNA expression of CfSOD in different tissues and the temporal expression of CfSOD in scallop challenged with Listonella anguillarum, Micrococcus luteus and Candida lipolytica respectively. Higher-level mRNA expression of CfSOD was detected in the tissues of haemocytes, gill filaments and kidney. The expression of CfSOD dropped in the first 8-16 h and then recovered after challenge with L. anguillarum and M. litteus, but no change was induced by the C. lipolytica challenge. The results indicated that CfSOD was a constitutive and inducible acute-phase protein, and could play an important role in the immune responses against L. anguillarum and M. luteus infection. (C) 2007 Elsevier Ltd. All rights reserved.