Wangia profunda gen. nov., sp nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment

An orange-pigmented, Gram-negative, nonmotile, strictly aerobic and oxidase- and catalase-positive bacterium (SM-A87(T)) was isolated from the deep-sea sediment of the southern Okinawa Trough area. The main fatty acids were i15 : 0, i17 : 0 3OH, i15 : 1 G, i17 : 1 omega 9c, 15 : 0, i15 : 0 3OH and summed feature 3 (comprising i-15 : 0 2OH and/or 16 : 1 omega 7c). MK-6 was the predominant respiratory quinone. DNA G+C content was 35.8 mol%. Flexirubin-type pigments were absent. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain SM-A87(T) formed a distinct lineage within the family Flavobacteriaceae, with < 93% sequence similarity to the nearest strain of genus Salegentibacter. Moreover, strain SM-A87(T) could be distinguished from the nearest phylogenetic neighbors by a number of chemotaxonomic and phenotypic properties. On the basis of polyphasic analyses, it is proposed that strain SM-A87(T) be classified in a novel genus and a new species in the family Flavobacteriaceae, designated Wangia profunda gen. nov., sp. nov. The type strain is SM-A87(T) (CCTCC AB 206139(T)=DSM 18752).

Myroides profundi sp nov., isolated from deep-sea sediment of the southern Okinawa Trough

A Gram-negative, nonmotile, aerobic and oxidase- and catalase-positive bacterium,, designated D25(T), was isolated from the deep-sea sediments of the southern Okinawa Trough area. Phylogenetic analyses of 16S rRNA gene sequences showed that strain D25(T), fell within the genus Myroides, with 99.2%, 96.0% and 93.4% sequence similarities to the only three recognized species of Myroides. However, the DNA-DNA similarity Value between strain D25(T) and its nearest neighbour Myroides odoratimimus JCM 7460(T) was only 49.9% ( < 70%). Several phenotypic properties could be used to distinguish strain D25(T) from other Myroides species. The main cellular fatty acids of strain D25(T) were iso-C-15:0, iso-C-17:1 omega 9C, iso-C(17:0)3-OH and Summed Feature 3 (comprising C-16:1 omega 7c and/or iso-C(15:0)2-OH). The major respiratory quinone was MK-6. The DNA G+C content was 33.0 mol%. The results of the polyphasic taxonomy analysis suggested that strain D251(T) represents a novel species of the genus Myroides, for which the name Myroides profundi sp. nov. is proposed. The type strain is D25(T) (=CCTCC M 208030(T) = DSM 19823(T)).

Diversity of Both the Cultivable Protease-Producing Bacteria and Their Extracellular Proteases in the Sediments of the South China Sea

Protease-producing bacteria are known to play an important role in degrading sedimentary particular organic nitrogen, and yet, their diversity and extracellular proteases remain largely unknown. In this paper, the diversity of the cultivable protease-producing bacteria and their extracellular proteases in the sediments of the South China Sea was investigated. The richness of the cultivable protease-producing bacteria reached 10(6) cells/g in all sediment samples. Analysis of the 16S rRNA gene sequences revealed that the predominant cultivated protease-producing bacteria are Gammaproteobacteria affiliated with the genera Pseudoalteromonas, Alteromonas, Marinobacter, Idiomarina, Halomonas, Vibrio, Shewanella, Pseudomonas, and Rheinheimera, with Alteromonas (34.6%) and Pseudoalteromonas (28.2%) as the predominant groups. Inhibitor analysis showed that nearly all the extracellular proteases from the bacteria are serine proteases or metalloproteases. Moreover, these proteases have different hydrolytic ability to different proteins, reflecting they may belong to different kinds of serine proteases or metalloproteases. To our knowledge, this study represents the first report of the diversity of bacterial proteases in deep-sea sediments.

Bromophenols coupled with nucleoside bases and brominated tetrahydroisoquinolines from the red alga Rhodomela confervoides

Three new bromophenols C-N coupled with nucleoside base derivatives (1-3) and three new brominated 1,2,3,4-tetrahydroisoquinolines (5-7, together with a new brominated tyrosine derivative (4, have been isolated from polar fractions of an ethanolic extract of the red alga Rhodomela confervoides. By spectroscopic and chemical methods including HRMS and 2D NMR data, their structures were determined as 7-[3-bromo-2-(2,3-dibromo-4,5-dihydroxybenzyl)-4,5-dihydroxybenzyl]-3,7-dihydro-1H-purine-2,6-dione (1), 7-(2,3-dibromo-4,5-dihydroxybenzyl)-3,7-dihydro-1H-purine-2,6-dione (2, 9-[3-bromo-2-(2,3-dibromo-4,5-dihydroxybenzyl)-4,5-dihydroxybenzyl]adenine (3), (-)-8S-(3-bromo-5-hydroxy-4-methoxy)phenylalanine (4), (-)-3S-8-bromo-6-hydroxy-7-methoxy-1,2,3,4-tetrahydroisoquinoline-3-carboxylic acid (5), methyl (-)-3S-8-bromo-6-hydroxy-7-methoxy-1,2,3,4-tetrahydroisoquinoline-3-carboxylate (6), and methyl (-)-3S-6-bromo-8-hydroxy-7-methoxy-1,2,3,4-tetrahydroisoquinoline-3-carboxylate (7). Compounds 5-7 were semisynthesized by using 4 as the starting material.

Minor sesquiterpenes with new carbon skeletons from the brown alga Dictyopteris divaricata

Five minor sesquiterpenes (1-5) with two novel carbon skeletons, together with a minor new oplopane sesquiterpene ( 6), have been isolated from the brown alga Dictyopteris divaricata. By means of spectroscopic data including IR, HRMS, 1D and 2D NMR, and CD, their structures including absolute configurations were assigned as (+)-(1R, 5S, 6S, 9R)3- acetyl-1-hydroxy-6-isopropyl-9-methylbicyclo[4.3.0] non-3-ene ( 1), (+)-(1R, 3S, 4S, 5R, 6S, 9R)-3-acetyl-1,4-dihydroxy-6- isopropyl-9-methylbicyclo[4.3.0] nonane (2), (+)-(1R, 3R, 4R, 5R, 6S, 9R)-3-acetyl-1,4-dihydroxy-6-isopropyl-9-methylbicyclo[ ;4.3.0] nonane ( 3), (+)-(1S, 2R, 6S, 9R)-1-hydroxy-2-(1-hydroxyethyl)-6-isopropyl-9-methylbicyclo[4.3.0] non-4-en-3-one (4), (-)-( 5S, 6R, 9S)-2-acetyl-5-hydroxy-6-isopropyl-9-methylbicyclo[4.3.0] non-1-en-3-one ( 5), and (-)-( 1S, 6S, 9R)- 4-acetyl- 1-hydroxy-6-isopropyl-9-methylbicyclo[ 4.3.0] non-4-en-3-one ( 6). Biogenetically, the carbon skeletons of 1-6 may be derived from the co-occurring cadinane skeleton by different ring contraction rearrangements. Compounds 1-6 were inactive (IC50 > 10 mu g/mL) against several human cancer cell lines.

Phylogenetic relationships of five pika species (genus Ochotona) based on mitochondrial DNA restriction maps

Restriction site mapping of mitochondrial DNA (mtDNA) with 16 restriction endonucleases was used to examine the phylogenetic relationships of Ochotona cansus, O. huangensis, O. thibetana, O. curzoniae and O. erythrotis. A 1-kb length variation between O. erythrotis of subgenus Pika and other four species of subgenus Ochotona was observed, which may be a useful genetic marker for identifying the two subgenera. The phylogenetic tree constructed using PAUP based on 61 phylogenetically informative sites suggests that O. erythrotis diverged first, followed by O. cansus, while O. curzoniae and O. huangensis are sister taxa related to O. thibetana, The results indicate that both O. cansus and O. huangensis should be treated as independent species. If the base substitution rate of pikas mtDNA was 2% per million years, then the divergence time of the two subgenera, Pika and Ochotana, is about 8.8 Ma ago of late Miocence, middle Bao-dian of Chinese mammalian age, and the divergence of the four species in subgenus Ochotona would have occurred about 2.5 - 4.2 Ma ago, Yushean of Chinese mammalian age. This calculation appears to be substantiated by the fossil record.

仿人机器人控制系统的研究与实现

根据仿人机器人控制性能的要求,设计开发了关节控制器,并通过CAN总线把各个关节控制器、力传感器及上位机连接在一起,构成了分布式控制系统.利用无线局域网技术,实现了语音、视频等多媒体信息的传输,把监控台、头部、上身和移动平台连接在一起,构成了仿人机器人完整的控制系统.最后提出了一些设想以提高系统的性能.

仿人机器人系统的研究与实现

针对仿人机器人的结构和控制性能的要求,设计开发了机器人的关节控制器,并利用CAN总线把各个关节和力传感器及上位机连接在一起,构成了有效可靠的分布式控制系统;利用无线局域网技术,实现了语音、视频等多媒体信息的传输,构成了仿人机器人完整的控制系统。最后提出了一些设想以提高系统的性能。

基于局域网的多水下机器人仿真系统设计与实现

多水下机器人仿真系统是一个能够对多水下机器人系统的体系结构、协调控制、路径规划、学习算法等进行演示验证的分布式实时数字仿真系统,是开展多水下机器人技术研究的基础和有效手段.讨论了应用基于局域网的分布式仿真技术来解决多水下机器人系统仿真的问题,并详细说明了仿真系统的硬件组成和软件总体设计.

湖南、广西泥盆纪硅岩地球化学与沉积构造背景

During the Devonian, a complicated carbonate platform-basin configuration was created through transtensional rifting in the context of opening of Devonian South China Sea; extensive bedded chert, commonly interbedded with tuffaceous beds, occurred in the narrow, elongate interplatform basins (or troughs) in South China, where they occurred earlier (Early Devonian) in southern Guangxi and later (early Late Devonian) in northern Guangxi-south central Hunan. In order to unravel the origin and distribution of the bedded chert successions, and their relationships to basement faulting activities during the opening of the Devonian South China Sea, studies of element (major, minor and REE) geochemistry and Rb-Sr, Sm-Nd isotopic systematics are carried out upon the chert deposits. These chert deposits commonly have high SiO2 contents and (average 94.01%) and low TFe2O3 (average 0.55%), together with other geochemical parameters, suggestive of both biogenic and hydrothermal origins. However, Fe/Ti ratio are high along the elongate interplatform basins(troughs) to the northwest along Wuxiangling-Zhaisha-Chengbu, and to the southeast along Xiaodong-Mugui-Xinpu, suggesting relatively intense hydrothermal activities there. They generally contain very low total REE contents (∑REE average 31.21ug/g) with mediate negative Ce anomalies (mean Ce/Ce*=0.83) and low Lan/Cen values (average 1.64), indicating an overall continental margin basin where they precipitated. The northward increases in Ce/Ce* values, particularly along the elongate troughs bounded both to the east and west of the Guangxi-Huanan rift basin, suggest a northward enhancement of terrigenous influences, thereby reflecting a gradual northward propagation of open marine setting. Generally low positive Eu anomalies in the chert, except for the apparently high Eu anomalies in the chert from Chengbu (Eu/Eu* up to 4.6), suggest mild hydrothermal venting activities in general, except for those at Chengbu. The initial 87Sr/86Sr (0) ratios of chert generally vary from 0.712000 to 0.73000 , suggesting influences both from terrigenous influx and seawater. The Nd isotopic model ages (tDM or t2DM) and initial εNd (0) values of chert vary mostly from 1.5 to 2.1 Ga, and from –16 to –21, respectively, implying that the silica sources were derived from the provenances of the Palaeoproterozoic crust relics at depth. The high εNd (0) values of chert (-0.22 to 14.7) in some localities, mostly along the elongate troughs, suggest that silica sources may have been derived from deeper-seated mantle, being channeled through the interplate boundary fault zones extending downwards to the mantle. At Wuxiangling, Nanning, chert occurs extensively from the Emsian through the Frasnian strata, both U/Th ratios and tDM ages of chert reached up to a maximum in the early Frasnian corresponding to the extensive development of chert in South China, pointing to a maximum extensional stage of Devonian South China basin, which is supported by the Ce/Ce* values as is opposed to the previous datasets as the coeval minimum values.

塔里木盆地柯坪-巴楚露头区白云岩成岩作用机理研究

Through field outcrop dolomite observation, laboratory petrography (macroscopy, microscopy, cathodeluminescence and scan electronic microscopy), geochemistry (carbon-oxygen-strontium isotopes and trace elements) and fluid inclusion microthermometry study in Keping-Bachu area of Tarim Basin, it can be inferred that there are existing eight dolomite texture types within four evolution phases in Keping-Bachu area of Tarim Basin. The paragenesis of different dolomite texture types and associated minerals in Keping-Bachu area has been established. The carbon and oxygen isotopes of saddle dolomites and matrix dolomites overlap greatly. The Strontium isotopes results of Keping-Bachu outcrop area show that the strontium isotopes differentiation of the matrix and saddle dolomites is not obvious, the reason of which is that there is thousands of Cambrian-Ordovician dolomite strata below the stratum bearing the saddle dolomite. In the process of the heat flow upward migration, the isotopes of the heat interacts with the host rock, which leads to the similarity betwwen the strontium of the saddle dolomite and matrix dolomite. The strontium isotope of the saddle dolomite is not very radiogenic. the six types samples within four phases in the study area show Eu negatively. Comparing to the other types of samples, the δEu of saddle dolomite is relatively high falling into the range of 0.510-0.874, which shows that the saddle dolomite forms in the hydrothermal setting and is affected by the hydrothermal activity to some extend.The Lan/Ybn of saddle dolomite is high up to 15.726, which means that the HREE is very rich. It belongs to the typical hydrothermal genesis model. The δCe of saddle dolomite is positive anomaly, which is the result of high effect from the land source debris. The homogeneous temperature of the saddle dolomite falls into two ranges 110-120℃ and 125-160℃, after pressure correction, they are 141-152℃，157.5-196℃, the salinity of the saddle dolomite can reach to 20-25%. With the comparing with the burial history, the Th of the saddle dolomite is high than the ambient strata temperature, these data show that the saddle dolomite is of hydrothermal origin. The evolution trend of different dolomite and associated minerals is from matrix dolomite, dolomite cementation, saddle dolomite, quartz to calcite. Alonging with this evolution trend, the temperature of the diagenetic flow initiated from 80-100℃, after rising to 135-160℃, then gradually declined. Finally, a structurally-controlled dolomitization model is established in Keping-Bachu area of Tarim Basin.

特提斯喜马拉雅带晚白垩世-始新世沉积源区分析及其构造意义

Tethyan Himalayan Sequence (THS) is located at the frontier of the India-Asia collision zone, which can preserve critical information about collision. This paper reports detailed petrology, geochemistry, spinels electron microprobe data, and in situ U-Pb ages and Lu-Hf isotopic data on detrital zircons from the late Cretaceous to early Eocene strata in Gyantze and Gamba area, south Tibet that provide important constraints on the early tectonic evolution of the India-Asia collision. In Gyantze, the lithic arkose in Zongzhuo mélange is characterized by, SiO2 =80.4%, Al2O3=8.6%, Na2O=1.6%, K2O=1.1%, LaN/YbN=8.90, and εNd (0) =-10.27. Spinels compositions are characterized by low TiO2 (generally <0.1%) and a Cr number mainly between 70 and 80. The largest population of detrital zircons is within the 73-169Ma range with high εHf (t) and > 500 Ma with complex εHf (t) values. The lithic arkose in Rilang conglomerate is characterized by, SiO2 =56.5%, Al2O3=15.6%, Na2O=4.7%, K2O=0.6%, LaN/YbN=5.00-5.29, and εNd (0) =1.92. Spinels of 2006T98 display high TiO2 (generally >0.2%) and a Cr number mainly between 70 and 85, other spinels are characterized by low TiO2 (generally <0.2%) and a Cr number mainly between 60 and 90. The largest population of detrital zircons is within 90-146 Ma range with high εHf (t). The lithic arkose in Jiachala formation is characterized by, SiO2 =64.6%, Al2O3=12.1%, Na2O=1.9%, K2O=1.8%, LaN/YbN=7.73-9.13, and εNd (0) =-5.52~-8.43. Spinels in the Jiachala formation have low TiO2 (generally <0.2%) and a Cr number between 39 and 88. Detrital zircons have a wide range of age distribution of 82-3165Ma with complex εHf (t). In Gamba, The quartze sandstone in Jidula formation is characterized by, SiO2=97.4%, Al2O3=0.9%, Na2O=0.03%, K2O=0.18%, LaN/YbN=18.70-21.684, and εNd (0) between -13.1~-7.4. While the lithic arkose in Zhepure formation is characterized by, SiO2=68.4%, Al2O3=7.3%, Na2O=1.15%, K2O=0.52%, LaN/YbN=6.09-8.99, and εNd(0)=-5.8~-6.3. Based on our geochemical analysis, spinles electron microprobe data, U–Pb ages and Hf isotope data for detrital zircons of the late Cretaceous-Eocene strata in Gyantze and Gamba, southern Tibet, the following major conclusions can be drawn: 1. In Gyantze, the Zongzhuo mélange was mainly derived from accretionary prism/THS of continental slop and Gangdese arc. Rilang conglomerate was totally from Gangdese arc. The Jiachala formation was derived from THS, suture zone and Gangdese arc. 2. In Gamba, the Jidula formation was from India craton, while the Zhepure formation was derived from THS, suture zone and Gangdese arc. 3. The deposite of Zongzhuo mélange and Rilang conglomerate (73-55Ma) marks the collision between India and Asia. 4. Late Paleocene-Eocene tectonic evolution is consistent with foreland basin system.

A gas chromatographic analysis of light hydrocarbons on a column packed with modified silica gel

A one-meter long column packed with silica gel is used to separate light hydrocarbons. The silica gel has been modified with several kinds of gas chromatography stationary phases. Among these, PEG 2000 shows fairly good effect when using 80-100 meshes silica gel for the separation of mixture of methane, ethane, ethylene, acetylene, propane, propylene and n-, i-butane. The different behavior of silica gel between batch to batch is also found. When silica gel is coated with a small amount of Al2O3 prepared with sol-gel method, better resolution has been observed on a 2-meter column compared with the non-modified silica gel.