Electronic structures of hafnium dimer and trimer by density functional theory

Equilibrium geometries, vibrational frequencies and dissociation energies of hafnium dimer and trimer were studied by density functional methods B3LYP, BLYP, B3PW91, BHLYP, BP86, B3P86, mPW1PW91 and PBE1PBE. The results indicate that singlet is the ground state both for hafnium dimer and for trimer. For hafnium dimer, the calculated bond distance is less sensitive to the methods used. Except at BHLYP level, the calculated vibrational frequency is comparable to the experimental value. For hafnium trimer, equilateral triangle with D-3h symmetry is slightly favored compared with isosceles triangle with C-2v, symmetry except at BHLYP level. This conclusion is in agreement with experiment in which the ground state of Hf-3 is fluxional and low-spin or closed shell is preferred.

Microstructures and properties of melt-spun and as-cast Mg-20Gd binary alloy

Mg-20Gd(%, mass fraction) samples were prepared using melt-spinning and copper mold casting techniques. Microstructures and properties of the Mg-20Gd were investigated. Results show that the melt-spun ribbon is mainly composed of supersaturated alpha-Mg solid solution phase and the as-east ingot mainly contains alpha-Mg solid solution and Mg5Gd phase. The differential scanning calorimeter (DSC) curve of the ribbon exhibits a small exothermic peak in the temperature range from 630 to 680 K, which indicates that the ribbon contains a metastable phase (amorphous). Tensile strength at room temperature of the melt-spun ribbon and as-cast specimen are 308 and 254 MPa, respectively. The elongations of the two samples are less than 2%. The fracture surfaces demonstrate that the fracture mode of the as-cast Mg-20Gd is a typical cleavage fracture and that of the melt-spun sample is a combination of brittle fracture and ductile fracture.

Helix-sense-selective polymerization of N,N-diphenyl (meth)acrylamide by anionic catalysts

In this paper, the helix-sense-selective polymerization of N,N-diphenyl acrylamide (DPAA) and N,N-diplienyl methacrylamide(DPMAA) were studied with living helix prepolymer as anionic initiator, and the chiral optical properties of the obtained polymers were investigated too. It was shown that optically active polymers of DPAA and DPMAA could be obtained under the experimental condition, and exhibited the same screw sense as that of the prepolymer.

Studies on the structure of tricyclohexyltin-2-(1,2-dithioethylene)methylene-3-oxo-5-aryl-4-pentenicate

Three title compounds were prepared and the structure of title compound 2 was characterized by IR, H-1 NMR, C-13 NMR, Sn-119 NMR spectroscopy and the crystal structure of compound 2a was determined by X-ray analysis with the final R indices[I >2 sigma (I)] R-1 = 0.0350 and R-2,R-omega = 0.0888. The crystal of compound 2a belongs to triclinic system, space group P1 with a = 1.0598(6) nm, b = 1.307 4(10) nm, c = 1.378 6(10) nm, alpha = 62.666(7)degrees, beta = 72.530(2)degrees, gamma = 80. 680(2)degrees, V = 1.618 0 nm(3), D-x = 1. 444 g (.) cm(-3), Z = 1, F (000) = 728. The bond length of Sn1-O1 is 0. 2076 nm and Sn1 . . . O2 distance is 0.301 3 nm. The coordination about the tin atom can be considered as a distorted tetrahedral. The detail values of H-1 NMR, C-13 NMR, Sn-119 NMR, (2)J(119Sn-1H) and J(119Sn-13C) were obtained. delta (119Sn) = 23.836, (2)J(119Sn-1H) = 88.0 Hz, (1)J(119Sn-13C) = 347.1 Hz, (2)J(119Sn-13C) = 45.6 Hz.

Probabilistic distribution of one-phase structure seminvariants for an isomorphous pair of structures: Theoretical basis and initial applications

Given a special type of triplet of reciprocal-lattice vectors in the monoclinic and orthorhombic systems, there exist eight three-phase structure seminvariants (3PSSs) for a pair of isomorphous structures. The first neighborhood of each of these 3PSSs is defined by the six magnitudes and the joint probability distribution of the corresponding six structure factors is derived according to Hauptman's neighborhood principle. This distribution leads to the conditional probability distribution of each of the 3PSSs, assuming as known the six magnitudes in its first neighborhood. The conditional probability distributions can be directly used to yield the reliable estimates (0 or pi) of the one-phase structure seminvariants (1PSSs) in the favorable case that the variances of the distributions happen to be small [Hauptman (1975). Acta Cryst. A31, 680-687]. The relevant parameters in the formulas for the monoclinic and orthorhombic systems are given in a tabular form. The applications suggest that the method is efficient for estimating the 1PSSs with values of 0 or pi.

THE VALENCE CHANGE FROM RE3+ TO RE2+ (RE-EQUIVALENT-TO-EU, SM, YB) IN SRB4O7-RE PREPARED IN AIR AND THE SPECTRAL PROPERTIES OF RE2+

A valence change from RE3+ to RE2+ (RE=Eu, Sm, Yb) was observed in samples of SrB4O7: RE prepared by solid state reaction at high temperature in air. The phosphors SrB4O7: RE2+ show efficient luminescence at room temperature. The broad band d-f emissions of Eu2+ and Yb2+ are at 367 and 360 nm respectively. The sharp line f-f emissions of the Sm2+ ion (5D0-F-7(J)) are in the range 680-780 nm. The probable reasons for the valence change of Eu, Sm and Yb in this host are discussed.

THE SYNTHESES OF THE COMPLEXES (ETA-5-C5H5)LN(ETA-8-C8H8).NTHF AND (ETA-5-C9H7)LN(ETA-8-C8H8).2THF AND THE CRYSTAL-STRUCTURE DETERMINATION OF (ETA-5-C5H5)PR(ETA-8-C8H8).2THF AND (ETA-5-C9H7)PR(ETA-8-C8H8).2THF

LnCL3 reacts with NaC5H5 and K2C8H8 to yield the complexes (eta-5-C5H5)Ln(eta-8-C8H8).nTHF (Ln = Pr, Nd, n = 2; Ln = Gd, n = 1) and LnCl3 reacts with KC9H7 and K2C8H8 to yield the complexes (eta-5-C9H7)Ln(eta-8-C8H8).2THF (Ln = Pr, Nd; eta-5-C9H7 = indenyl); crystallography reveals (eta-5-C5H5)Pr(eta-8-C8H8).2THF and (eta-5-C9H7)Pr(eta-8-C8H8).2THF not to possess the parallel ring sandwich structure.

Natural Anthraquinone Derivatives from a Marine Mangrove Plant-Derived Endophytic Fungus Eurotium rubrum: Structural Elucidation and DPPH Radical Scavenging Activity

There is considerable interest in the isolation of potent radical scavenging compounds from natural resources to treat diseases involving oxidative stress. In this report, four new fungal metabolites including one new bisdihydroanthracenone derivative (1, eurorubrin), two new seco-anthraquinone derivatives [3, 2-O-methyl-9-dehydroxyeurotinone and 4, 2-O-methyl4-O-(alpha-D-ribofuranosyl)-9-dehydroxyeurotinone], and one new anthraquinone glycoside [6,3-O-(alpha-D-ribofuranosyl)questin], were isolated and identified from Eurotium rubrum, an endophytic fungal strain that was isolated from the inner tissue of the stem of the marine mangrove plant Hibiscus tiliaceus. In addition, three known compounds including asperflavin (2), 2-O-methyleurotinone (5), and questin (7) were also isolated and identified. Their structures were elucidated on the basis of spectroscopic analysis. All of the isolated compounds were evaluated for 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging activity.

Interaction between phycobilisomes from Porphyridium cruentum and thylakoid membranes from Gymnodinium sp or spinach

Thylakoid membranes were isolated from Gymnodinium sp. and spinach, whereas the phycobilisomes were isolated and purified from red alga Porphyridium cruentum. The absorption spectra of the purified phycobilisomes (PBS) showed three peaks at 548, 564, and 624 nm, respectively, and the ratio of the fluorescence intensity at the lambda(680)(em) to lambda(80)(em5) that at was about 7.3. All these results demonstrated that the purified PBS remained intact. The thylakoid membranes were incubated with the purified phycobilisomes, and the thylakoid membranes, which harbored the phycobilisomes, were purified by sucrose density gradient centrifugation. Meantime, the conjugates of phycobilisome-thylakoid membranes were constructed using glutaraldehyde and further purified. Their characteristics were studied by measuring the absorption spectra and fluorescence emission spectra. The results showed that the phycobilisomes from Porphyridium cruentum can attach to the thylakoid membranes from Gymnodinium sp. and spinach without covalent cross-linking, but the excited energy transfer did not occur. The conjugate of phycobilisome-thylakoid. membranes with covalent cross-linking exhibits the excited energy transfer between the phycobilisomes and the thylakoid membranes.

Cys-92, Cys-95, and the C-terminal 12 residues of the Vibrio harveyi ferric uptake regulator (Fur) are functionally inessential

Ferric uptake regulator (Fur) is a global regulator involved in multiple aspects of bacterial life. The gene encoding the Vibrio harveyi Fur (Fur(vh)) was cloned from a pathogenic V. harveyi strain isolated from diseased fish. Furvh shares 77% overall sequence identity with the Escherichia coli Fur (Fur(Ec)) and could complement a mutant of Fur(Ec). Like Fur(Ec), Fur(Vh), possesses two cysteine residues at positions 92 and 95, yet unlike Fur(Ec), in which these cysteine residues constitute part of the metal ion coordination site and hence are vital to the repressor activity, C92 and C95 of Fur(Vh) proved to be functionally inessential. Further study identified a Vibrio Fur signature sequence, which is preserved in all the ten Vibrio Fur proteins that have been discovered to date but in none of the non-vibrio Fur proteins. Site-directed and random mutation analyses of the signature residues, the cysteine residues, and seven highly charged amino acid residues indicated that D9, H32, C137, and K138 of Fur(vh) are functionally important but D9, C137, and K138 can be replaced by more than one functional substitutes. Systematic deletion analysis demonstrated that the C-terminal 12 residues of Fur(Vh) are functionally inessential. These results (i) indicated that the activation mechanism, or certain aspects of which, of Fur(Vh) is possibly different from that of Fur(Ec); and (ii) suggested that it is not very likely that the C-terminal 12 residues play any significant role in the activation or stability of Fur(Vh); and (iii) provided insights into the potential function of the local structure involving C137 and K138.

Electrochemical measurement of hydrogen peroxide in plasma: Evaluation of freshwater prawn (Macrobrachium rosenbergii) and crucian carp (Cyprinus carpio) phagocytes under natural conditions

An electrochemical technique for the real-time detection of hydrogen peroxide (H2O2) was employed to describe respiratory burst activity (RBA) of phagocytes in plasma which can be used to evaluate the ability of immune system and disease resistance. The method is based upon the electric current changes, by redox reaction on platinum electrode of extracellular hydrogen peroxide (H2O2) released from phagocytes stimulated by the zymosan at 680 mV direct current (d.c.). Compared with the control, activation of respiratory burst by zymosan particles results in a high amperometric response, and a current peak was obtained during the whole monitoring process. The peak current was proved by addition Of Cu2+ and other controls, to be the result of intense release of H2O2 from phagocytes. The peak area was calculated and used to evaluate the quantity of effective H2O2, which represents the quantity of H2O2 beyond the clearance of related enzymes in plasma. According to Faraday's law, the phagocytes' ability of prawns to generate effective H2O2 was evaluated from 1.253 x 10(-14) mol/cell to 6.146 x 10(-14) mol/cell, and carp from 1.689 x 10(-15) Mol/Cell to 7.873 x 10(-1)5 mol/cell. This method is an acute and quick detection of extracellular effective H2O2 in plasma and reflects the capacity of phagocytes under natural conditions, which could be applied for selecting species and parents with high immunity for breeding in aquaculture. (c) 2007 Elsevier Ltd. All rights reserved.

微孔配位聚合物的合成与表征

微孔配位聚合物是近年来被广泛研究的领域之一，这类材料在储气材料等领域的应用前景逐步被开发出来。作为良好的储气材料，配位聚合物必须具有规则的孔道结构和良好的稳定性。本论文以合成多维孔道新化合物为目标，成功合成并解析出13个微孔配位聚合物。对化合物的元素分析、红外和TGA等进行了表征，同时对部分化合物的紫外和荧光性质进行了测定。 首先，对微孔配位聚合物的最新研究动态进行了简要介绍，并对一些代表性化合物的结构类型、性能以及应用等进行了归纳总结。然后介绍了合成配位聚合物晶体的实验原理，化合物的表征方法。 本论文在水热条件下，成功合成了13个新化合物分别为：(C19H15N4)2(NO3)2∙3H2O (3-3)，(C19H15N4)2[CdCl4] (3-4)，2Ag(tta)∙AgNO3 (3-5)，Cu8(tta)15(H2O)Cl (3-6)，[Zn(5-CH3-tta)2(isoH)2] (BDC) (3-7)，Pb[(PO3)2C(OH) CH3]•H2O (4-1)，Ni(C5H4NCOO)2∙4H2O (5-2)，Co(C5H4NCOO)2(H2O)2∙2H2O (5-3)，[CdCl2(C13H12N2O)2] (5-4)，{C6H4(COOH)S}2 (5-5)，(Deta)(ClO4)NO3 (5-6)，(NH4)2[-Mo8O26] (6-1) 和 (NH4)2[Mo4O13] (6-2)。其中化合物3-5，3-6和3-7是由四氮唑和金属构筑的纳米孔道三维化合物；化合物3-3，3-4，5-2，5-3，5-4，5-5和5-6均具有超分子网络结构；4-1是有机膦酸为配体的二维层状化合物，是首例(5,5)连接的(47•63) (48•62)拓扑网络。化合物6-1是一维无限链骨架的钼酸盐，6-2是二维层状的钼酸盐，显示了不寻常的(32•4)(32•53•8)(3•42•54•6•82)(34•43•54•64) 拓扑网络。最后对论文进行概括总结，并展望了下一阶段的工作安排。

褐藻两个光系统的色素-蛋白质复合物的分离及特性研究

以褐藻裙带菜(Undaria pinnatifida)、萱藻(Scytosiphon lomentarius)、海蒿子(Sargassum confusum)、叉开网地藻(Dictyopteris divaricata)、海带(Laminaria japonica)、囊藻(Colpomenia sinuosa)、鼠尾藻(Sargassum thunbergii)、水云(Ectocarpus confervoides)为材料，对其色素-蛋白质复合物的分离技术及其特性进行了系统研究。通过对裙带菜色素-蛋白质复合物分离技术及其影响因素的研究，确立了褐藻的PAGE分离方法。采用Tris-Gly电泳分离系统，以非离子去污剂DMG或DIG为增溶剂(DMG: Chl=20: 1, DIG: Chl=50: 1, 4 ℃增溶1 h)，10%的分离胶浓度，丙烯酰胺与甲叉双丙烯酰胺的比例为30: 0.8,从裙带菜中成功地分离出8条含色素的蛋白质复合物带。采用Anderson命名系统，以高等植物菠菜为参照，将其命名为CPIa, CPI, CPa, LHC_1, LHC_2, LHC_3, LHC_4和LHC_5。游离色素较少。通过对三种褐藻的色素-蛋白质复合物的表观分子量测定、光谱学研究以及对裙带菜色素-蛋白质复合物的多肽组成分析，揭示了褐藻各种色素-蛋白质复合物的特征。CPIa是褐藻分子量较大的PSI复合物，为墨角藻黄素-叶绿素 a/c-蛋白质复合物。CPI是褐藻的PSI核心复合物，为P700-叶绿素 a-蛋白质复合物。CPa是褐藻的PSII复合物，为墨角藻黄素-叶绿素 a/c-蛋白质复合物。其余5条为捕光色素-蛋白质复合物，LHC_1和LHC_3是墨角藻黄素-叶绿素 a/c-蛋白质复合物，LHC_2, LHC_4和LHC_5是叶绿素 a/c-蛋白质复合物。根据裙带菜色素-蛋白质复合物的多肽分析结果并与高等植物比较，提出褐藻PSI和PSII的结构模型。褐藻PSI和PSII的反应中心多肽与高等植物相同，捕光复合物明显区别。褐藻LHCI和LHCII的多肽组成相同，都是由单一的20 kDa多肽组成。褐藻叶状体、叶绿体、类囊体膜和PSI复合物的77 K 荧光发射光谱具有特异性，缺少高等植物PSI特征的730 nm 荧光峰。叶状体的77 K 荧光发射光谱按荧光主峰的波长分为两种类型，一种类型的荧光主峰在690 nm，另一种类型的在705-720 nm。三种褐藻PSI复合物的77 K 荧光发射光谱相同，有两个分别们于680 nm和715 nm 的发射峰。褐藻的77 K 荧光特异是由PSI的结构决定的。根据褐藻PSI复合物的荧光特性以及去污剂增溶动力学分析结果，推动F715来自褐藻核心色素-蛋白质复合物，F680来源于PSI复合物中的捕光复合物。褐藻PSI复合物中缺少高等植物发射730 nm 荧光的LHCIb复合物的能量传递模型。

扇贝、对虾基因组BAC文库构建及其重要功能基因的初步筛选和分析

基因组大片段BAC文库是进行生物遗传学和基因组学研究必不可少的基础工具。为了深入开展栉孔扇贝（Chlamys farreri）和凡纳滨对虾（Litopenaeus vannamei）基因组学研究、阐明其基因组的结构与功能、图位克隆重要功能基因、构建高密度物理图谱并最终实现与已有遗传连锁图的整合，本研究在植物基因组BAC文库构建技术的基础上，针对海洋生物的特点进行了大胆的改革与尝试，最终成功构建了C. ferrari和L. vannamei两种重要海水养殖动物的基因组BAC文库。 本文构建的栉孔扇贝基因组BAC文库，由BamHI文库和MboI文库构成。其中BamHI文库含有73,728个BAC克隆，空载率约为1%，平均插入片段约为110 kb，覆盖栉孔扇贝单倍体基因组约8倍；MboI文库共有7,680个克隆组成，平均插入片段大小约为145 kb，插入率为100%，覆盖栉孔扇贝单倍体基因组约1.1倍。两个栉孔扇贝基因组BAC文库共由81,408个克隆组成，平均插入片段约为113 kb，覆盖率约为栉孔扇贝单倍体基因组大小的9.1倍。 将栉孔扇贝基因组BAC文库的192个384微孔培养板中的73,728个BAC克隆以4 x 4点阵形式制备了高密度DNA薄膜，用于对感兴趣的基因及DNA序列的筛选。高密度DNA薄膜的覆盖率约为栉孔扇贝单倍体基因组的8.3倍。针对栉孔扇贝先天免疫系统通路的6个重要功能基因，根据栉孔扇贝cDNA序列以及异缘物种DNA序列设计了Overgo探针。利用Overgo探针对高密度DNA薄膜杂交筛选的结果显示，平均每个基因检测到7.3个潜在阳性克隆。 本研究所构建的凡纳滨对虾基因组HindIII酶切BAC文库共有102,528个BAC克隆，存放于267个384微孔培养板中，平均插入片段大小约为101 kb，空载率约为5%，覆盖L. vannamei单倍体基因组约5倍。将其中240个384微孔培养板中的92,160个BAC克隆以4 x 4的矩阵排列形式制作了5张高密度凡纳滨对虾DNA薄膜，约覆盖整个对虾单倍体基因组的4.5倍。针对6个与对虾免疫、生殖生理有关的重要功能基因设计了Overgo探针，杂交筛选出20个阳性克隆，平均每个基因有3.3个潜在阳性克隆。 以上筛选结果不仅为进一步研究这些功能基因的结构与功能、表达与调控，揭示它们在扇贝和对虾以及其他近缘种的免疫系统、抗逆和生殖生理过程中的作用机理打下了基础，同时也间接验证了栉孔扇贝和凡纳滨对虾基因组BAC文库将成为基因筛选、基因的结构与功能分析、基因图位克隆、物理图谱构建以及大规模全基因组测序等方面的有力工具。

Preliminary study of the dynamic origin of the distribution pattern of bottom sediments on the continental shelves of the Bohai Sea, Yellow Sea and East China Sea

The bottom sediment types in the Bohai Sea, Yellow Sea and East China Sea (BYECS) are diversified, and their distribution pattern is very complicated. However, the bottom sediment types can be simplified to be sandy sediment, clayey sediment and mixed sediment, which comprise the complicated distribution pattern of bottom sediment in the BYECS. The continental shelves of the BYECS are broad, with shallow water depths and tidal currents which are permanent and dominate the marine dynamics in the BYECS. Based on numerical simulation of tidal elevations and currents in the BYECS, the rates of suspended load transport and bed load transport during a single tidal cycle for sediments of eight different grain size ranges are calculated. The results show that any sediment, whose threshold velocity is less than that of tidal current, has the same transport trend. Suspended load transport rare, bed load transport rate, and the ratio of the former to the latter decrease with grain size becoming coarser and coarser. The erosion/accretion patterns of sediments with different grain sizes are determined by the sediment transport rate divergences, and the results show that the patterns are the same for sediments with different grain sizes. Three main bottom sediment types, i.e. sandy sediment mainly composed of fine sand, clayey sediment mainly composed of silty clay, and mixed sediment mainly composed of fine sand, silt, and clay, are obtained by computation. The three bottom sediment types and their distribution pattern are consistent not only with sediment transport field and the sea bed erosion/accretion pattern obtained by simulation, but also with field data of bottom sediment types and divisions. In the BYECS, sand ridges form mainly in the areas with strong rectilinear tidal currents, sand sheets form mainly in the areas dominated by strong rotatory tidal currents, and clayey sediments, i.e. mud patches, form mainly in the areas with weak tidal currents. Hence, not only the sandy sediments but also the clayey sediments in the BYECS are formed under the control of the whole tidal current field of the BYECS. The three main bottom sediment types are not isolated respectively-in fact, they constitute a whole tidal depositional system. Under the condition with no cyclonic cold eddy, the clayey sediments in the BYECS can form in weak tidal current environments. Therefore, a cold eddy is not necessary for the deposition of clayey sediments in the BYECS. (C) 2000 Academic Press.