Diffusion and single molecule dynamics on biomolecular interface binding energy landscape

We propose a new approach to study the diffusion dynamics on biomolecular interface binding energy landscape. The resulting mean first passage time (MFPT) has 'U'curve dependence on the temperature. It is shown that the large specificity ratio of gap to roughness of the underlying binding energy landscape not only guarantees the thermodynamic stability and the specificity [P.A. Rejto, G.M. Verkhivker, in: Proc. Natl. Acad. Sci. 93 (1996) 8945; C.J. Tsai, S. Kumar, B. Ma, R. Nussinov, Protein Sci. 8 (1999) 1181; G.A. Papoian, P.G. Wolynes, Biopolymers 68 (2003) 333; J. Wang, G.M. Verkhivker, Phys. Rev. Lett. 90 (2003) 198101] but also the kinetic accessibility. The complex kinetics and the associated fluctuations reflecting the structures of the binding energy landscape emerge upon temperature changes. The theory suggests a way of connecting the models/simulations with single molecule experiments by analysing the kinetic trajectories.

Impedance spectrum measurement in liquid liquid interface electrochemistry .1. Analysis of various kinds of interfacial impedance in the four-electrode system

Applying impedance spectrum technique to liquid/liquid interfacial electrochemistry, we present the theoretical expression of the liquid/liquid interfacial impedance in the four - electrode electrolytic cell measured by alternating current impedance method. The influence of the electrolytic cell parameters and input passage parameters of the impedance apparatus on impedance spectrum curves are theoretically studied.

The relation between distribution of zooplankton and salinity in the Changjiang Estuary

Seasonal netzplankton samples from stations in the Changjiang (Yangtze River) Estuary were collected from May, 2004 to February, 2005. The dominant species and their contribution to the total zooplankton abundance were determined. Moreover, the relationship between the salinity and abundance was studied with stepwise linear regression. During the whole year, the salinity was positively correlated with the abundance, while the temperature, negatively. Linear regression analysis showed also a high positive correlation with salinity for total abundance in August and November, while in February and May, no obvious relations were found. The most abundant community was composed of neritic and brackish-water species. The North Passage (NP) (salinity <5) was greatly diluted by freshwater while the North Branch (NB) was brackish water with salinity range of 12-28. Consequently, clear decline in abundance of zooplankton was along the estuarine haloclines from the maximum in the area of high salinity to the minimum in the limnetic zone. Total zooplankton abundance and biomass were lower in NP than the NB in all seasons. In short, the salinity influenced the abundance of each species of zooplankton, and ultimately determined the total abundance of zooplankton. Furthermore, a winter peak in the abundance existed, which might be caused by the flourishing of Sinocalanus sinensis, a widely distributed species in the Changjiang Estuary.

Genetic model of the hydrate system in the fine grain sediments in the northern continental slope of South China Sea

Gas hydrate samples were obtained firstly in China by drilling on the northern margin of South China Sea (SCS). To understand the formation mechanism of this unique accumulation system, this paper discusses the factors controlling the formation of the system by accurate geophysical interpretation and geological analysis, based on the high precision 2-D and 3-D multichannel seismic data in the drilling area. There are three key factors controlling the accumulation of the gas hydrate system in fine grain sediment: (1) large volume of fluid bearing methane gas Joins the formation of gas hydrate. Active fluid flow in the northern South China Sea makes both thermal gas and/or biogenic gas migrate into shallow strata and form hydrate in the gas hydrate stability zone (GHSZ). The fluid flow includes mud diapir and gas chimney structure. They are commonly characterized by positive topographic relief, acoustic turbidity and push-down, and low reflection intensity on seismic profiles. The gas chimneys can reach to GHSZ, which favors the development of BSRs. It means that the active fluid flow has a close relationship with the formation and accumulation of gas hydrate. (2) The episodic process of fracture plays an important role in the generation of gas hydrate. It may provide the passage along which thermogenic or biogenic gas migrated into gas hydrate stability zone (GHSZ) upward. And it increases the pore space for the growth of hydrate crystal. (3) Submarine landslide induced the anomalous overpressure activity and development of fracture in the GHSZ. The formation model of high concentration gas hydrate in the drilling sea area was proposed on the basis of above analysis.

Interbasin freshwater, heat and salt transport through the boundaries of the East and South China Seas from a variable-grid global ocean circulation model

The monthly and annual mean freshwater, heat and salt transport through the open boundaries of the South and East China Seas derived from a variable-grid global ocean circulation model is reported. The model has 1/6degrees resolution for the seas adjacent to China and 30 resolution for the global ocean. The model results are in fairly good agreement with the existing estimates based on measurements. The computation shows that the flows passing through the South China Sea contribute volume, heat and salt transport of 5.3 Sv, 0.57 PW and 184 Ggs(-1), respectively (about 1/4) to the Indonesian Throughflow, indicating that the South China Sea is an important pathway of the Pacific to Indian Ocean throughflow. The volume, heat and salt transport of the Kuroshio in the East China Sea is 25.6 Sv, 2.32 PW and 894 Ggs(-1), respectively. Less than 1/4 of this transport passes through the passage between Iriomote and Okinawa. The calculation of heat balance indicates that the South China Sea absorbs net heat flux from the sun and atmosphere with a rate of 0.08 PW, while the atmosphere gains net heat flux from the Baohai, Yellow and East China Seas with a rate of 0.05 PW.

Dynamics of the cold-water event off the southeast coast of the United States in the summer of 2003

The cold-water event along the southeast coast of the United States in the summer of 2003 is studied using satellite data combined with in situ observations. The analysis suggests that the cooling is produced by wind-driven coastal upwelling, which breaks the thermocline barrier in the summer of 2003. The strong and persistent southwesterly winds in the summer of 2003 play an important role of lifting the bottom isotherms up to the surface and away from the coast, generating persistent surface cooling in July-August 2003. Once the thermocline barrier is broken, the stratification in the nearshore region is weakened substantially, allowing further coastal cooling of large magnitudes by episodic southerly wind bursts or passage of coastally trapped waves at periods of a few days. These short-period winds or waves would otherwise have no effects on the surface temperature because of the strong thermocline barrier in summer if not for the low-frequency cooling produced by the persistent southwesterly winds.

Effect of graded levels of rapeseed oil in isonitrogenous diets on the development of the gastrointestinal tract, and utilisation of protein, fat and energy in broiler chickens

The effect of feeding 0, 4, 8 and 16% rapeseed oil from 12-42 days of age was studied in broiler chickens on performance, digestibility of nutrients, and development of gastrointestinal tract, protein and energy metabolism. Thirty six female chickens (Ross 208) with initial body weight average 246 g were allocated to the four groups and kept pair-wise in metabolism cages. The chickens were fed similar amounts of metabolisable energy (ME) per day and similar amounts of essential amino acids relative to ME by adjusting with crystalline amino acids. The chickens were subjected to four balance periods each of five days with two 24 h measurements of gas exchange in two open-air-circuit respiration chambers inserted on the second and third day of each period. The addition of rapeseed oil increased the amount of gutfill indicating a reduced rate of passage and causing a hypertrophy of the gastrointestinal tract. There was a positive effect on feed utilisation as well as on digestibility especially of dietary fat together with higher utilisation of protein with addition of rapeseed oil. The partial fat digestibility of rapeseed oil estimated by regression was 91.1% and the partial metabolisability (ME/GE) of the rapeseed oil was estimated to 85% yielding an apparent metabolisable energy value of 34.30 MJ/kg.

小型爬壁机器人系统设计与应用

针对一种小型的双足爬壁机器人,设计开发了基于DSP2812处理芯片的控制系统.该机器人系统采用双足真空吸盘式结构和用3个电机驱动5个关节的欠驱动结构.双足真空吸盘式结构使其可以在光滑的墙面和天棚行走,又能够在交接面之间完成跨步行走.而欠驱动结构减少了电机的数目,从而减小了机器人的尺寸和降低了机器人的质量和能量消耗,但它也给机器人的控制和运动规划带来了新的挑战.已完成的系统设计包括运动模式设计、关节控制、通信模块设计和吸盘足控制等.实验结果证明了所提出方案的可行性.

埕北断阶带油气运聚动力学研究

The problem of oil and gas migration and accumulation have been investigated for many years in petroleum geology field. However, it is still the most weak link. It is a challenge task to research the question about the dynamics of hydrocarbon migration and accumulation. The research area of this article,Chengbei step-fault zone is the important exploration area of Dagang oil field.The oil distribution is complicated in this area because of abundant faults and rock-reservoir-cap assemblage.In recent years, oil shows is often discovered, but no large-scale pool is found. The most important problem influencing exolore decision is lake of kowning about accumulation process of oil and resources potential. According to the geology characteristic and exolore difficult, the analysis principles of dynamics is used in this paper. The course from source to reservoir is considered as main research line, and relation of valid source rcok, migration dynamic and heterogeneous distribution of carrier is discussed especially in key time. By use of numerial model the couling of migration and passage is realized and dynamic process of oil migration is analysed quantitatively. On the basis of other research about structure and sendiment, basin model is built and parameters are choiced. The author has reconstructed characteristic and distribution of fluid dynamical in main pool-forming time by numerical model. The systems of oil migration and acuumulaiton are divided according to distribution of fluid potential. Furthermore, the scope of valid sourece rock and scale of discharging hydrocarbon is studied in geology history by the method of producting hydrocarbon poential. In carrier research, it is outstanding to analyse the function that fault controls the oil-gas migration and accumulation. According to the mechanism of fault sealing, the paper author puts forward a new quantitative method evaluating fault opening and sealing properties-fault connective probability by using the oil and gas shows in footwall and hangwall reservoir as the index of identifying fault sealing or non-sealing. In this method, many influencing factors are considered synthetically. Then the faut sealing propery of different position in third deimention of faults controlling hydrocarbon acummulation are quantitative evaluated, and it laies a foundation for building compex carrier systems. Ten models of carrier and dynamical are establishe by analysis of matching relation of all kinds of carriers in main pool-forming period. The forming process and distribution of main pathway has been studied quantitatively by Buoyancy-Percolation mode, which can conbine valid source rock, migration dynamical and carrier. On the basis of oil-gas migration and accumulation model, the author computes the loss of hydrocarbon in secondary migration, ahead of cap formation, and the quantity of valueless accumulation according to the stage of migration and accumulation and the losing mechamism. At the same time, resource potential is evaluated in every migration and accumulation system. It shows that the quanlity of middle systems arrive to 5.67×108t, which has a huge explore potential prospect. Finally, according to the result of quantitve analysis above mentioned, the favorable explore aims are forcasted by the way of overlapping migration pathway and valid trap and considering factors of pool-forming. The drilling of actual wells proved that the study result is credible. It would offer strong support to optimize explore project in Chengbei step-fault zone.

电离层行进式扰动的GPS台网监测研究

In this dissertation, we investigated two types of traveling ionospheric disturbances (TIDs)/gravity waves (GWs) triggered separately by auroral energy input during super geomagnetic storms and solar terminator (ST) under quiet geomagnetic conditions (kp<3+) using TEC measurements from the global network of GPS receivers. Research into the generation and propagation of TIDs/GWs during storms greatly enhance our understandings on the evolution processes of energy transportation from the high-latitude’s magnetosphere to the low-latitude ionosphere and the conjugated effect of TIDs propagation between the northern and southern hemispheres. Our results revealed that the conjugacy of propagation direction between the northern and southern hemispheres was subject to the influence of Coriolis force. We also figure out the evolution processes of ionospheric disturbances at the global scale. These are important topics that had not been well addressed previously. In addition, we also obtained thee wave structures of medium scale TIDs excited by the solar terminator (ST) moving over the northern America and physical mechanisms involved. Our observations confirm that the ST is a stable and repetitive source of ionospheric wave disturbances and the evidence of solar terminator generated disturbances has been demonstrated experimentally via the GPS TEC measurement. The main researches and results of this dissertation are as follows. First, the global traveling ionospheric disturbances (TIDs) during the drastic magnetic storms of October 29–31, 2003 were analyzed using the Global Position System (GPS) total electron content (TEC) data observed in the Asian-Australian, European and North American sectors. We collected the most comprehensive set of the TEC data from more than 900 GPS stations on the International GNSS Services (IGS) website and introduce here a strategy that combines polynomial fitting and multi-channel maximum entropy spectral analysis to obtain TID parameters. Moreover, in collaboration with my thesis advisor, I have developed an imaging technique of 2-dimensional map of TIDs structures to obtain spatial and temporal maps of large scale traveling ionospheric disturbances (LSTIDs). The clear structures of TEC perturbations map during the passage of TIDs were displayed. The results of our study are summarized as follows: (1) Large-scale TIDs (LSTIDs) and medium-scale TIDs (MSTIDs) were detected in all three sectors after the sudden commencement (SC) of the magnetic storm, and their features showed longitudinal and latitudinal dependences. The duration of TIDs was longer at higher latitudes than at middle latitudes, with a maximum of about 16 h. The TEC variation amplitude of LSTIDs was larger in the North American sector than in the two other sectors. At the lower latitudes, the ionospheric perturbations were more complicated, and their duration and amplitude were relatively longer and larger. (2) The periods and phase speeds of TIDs were different in these three sectors. In Europe, the TIDs propagated southward; in North America and Asia, the TIDs propagated southwestward; in the near-equator region, the disturbances propagated with the azimuth (the angle of the propagation direction of the LSTIDs measured clockwise from due north with 0°) of 210° showing the influence of Coriolis force; in the Southern Hemisphere, the LSTIDs propagated conjugatedly northwestward. Both the southwestward and northeastward propagating LSTIDs are found in the equatorial region. These results mean that the Coriolis effect cannot be ignored for the wave propagation of LSTIDs and that the propagation direction is correlated with the polar magnetic activity. (3) The day (day of year: 301) before the SC (sudden commencement) of magnetic storm, we observed a sudden TEC skip disturbances (±10 TECU). It should be a response for the high flux of proton during the solar flare event, but not the magnetic storms. Next, the most comprehensive and dense GPS network’s data from North-America region were used in this paper to analyze the medium scale traveling ionospheric disturbances (MSTIDs) which were generated by the moving solar terminator during the quiet days in 2005. We applied the multi-channel maximum entropy spectral analysis to calculated TID parameters, and found that the occurrence of ST-MSTIDs depends on the seasonal variations. The results of our study are summarized as follows: (1) MSTIDs stimulated by the moving ST (ST-MSTIDs) are detected at mid-latitudes after the passage of the solar terminator with the life time of 2～3 hours and the variation amplitude of 0.2～0.8 TECU. Spectral analysis indicated that the horizontal wavelength, average period, horizontal phase velocity of the MSTIDs are around 300±150 km，150±80 m/s and 25±15 min, respectively. In addition, ST-MSTIDs have wave fronts elongating the moving ST direction and almost parallel to ST. (2) The statistical results demonstrate that the dusk MSTIDs stimulated by ST is more obvious than the dawn MSTIDs in summer. On the contrary, the more-pronounced dawn MSTIDs occurs in winter. (3) Further analysis indicates that the seasonal variations of ST-MSTIDs occurrence frequency are most probably related to the seasonal differences of the variations of EUV flux in the ionosphere region and recombination process during sunrise and sunset period at mid-latitudes. Statistical study of occurrence characteristics of TIDs using the GPS network in North-American and European during solar maximum, In conclusion, statistical studies of the propagation characteristics of TIDs, which excited by the two common origins including geomagnetic storms and moving solar terminator, were involved with global GPS TEC databasein this thesis. We employed the multichannel maximum entropy spectral analysis method to diagnose the characteristics of propagation and evolvement of ionospheric disturbances, also, the characteristics of their regional distribution and climatological variations were revealed by the statistic analysis. The results of these studies can improve our knowledge about the energy transfer in the solar-terrestrial system and the coupling process between upper and lower atmosphere (thermosphere-ionosphere-mesosphere). On the other hand, our results of the investigation on TIDs generated by particular linear origin such as ST are important for developing ionospheric irregularity physics and modeling the transionosphere radio wave propagation. Besides, the GPS TEC representation of the ST-generated ionospheric structure suggests a better possibility for investigating this phenomenon. Subsequently, there are scientific meaning of the result of this dissertation to deeply discuss the energy transfer and coupling in the ionosphere, as well as realistic value to space weather forecast in the ionosphere region.

吐哈盆地山前带构造岩相带及油气藏预测研究

This paper based on the example of mountain front tectonic belt of Tuha basin - a typical basin in west China, using geological, logging and seismic data, combining the two methods-comprehensive analysis of geological-geophysical data and numerical simulation together, studies the types of tectonic lithofacies and the mechanism of oil/gas accumulation in mountain front tectonic belt, and predicts favorable exploration areas. The tectonic lithofacies in periphery belt of compressional basin is systematically studied for the first time. The distribution and systematically analyzed with geological, logging and seismic data; the bury history of formations in the mountain front are restored with the back-stripping technique; the tectonic depression history of the mountain front is studied according to Airy Balanced Model; the tectonic evolution history is restored with the balanced section technique; according to the space composition of tectonic units and sedimentary systems of different geological time, the tectonic facies belt of the middle and lower Jurassic in the piedmont is divided into 12 types, and the controls of each type's tectonic lithofacies belt on the conditions of oil/gas generation, reservation and sealing are analyzed in depth. 3D numerical simulation and analysis is applied to the tectonic stress field in the hydrocarbon reservoir-forming-period for the first time. Because of the complex evolution of mountain front of Tuha basin, 3D numerical simulation of tectonic stress field in the hydrocarbon reservoir-forming-period helps to study the magnitude of the maximum principal stress, the minimum principal stress and the shear stress, the range and distribution of the principal stress, and controls of the upwards factors on the oil/gas migration and accumulation. Through the study on the oil-controlling fault's evolution, sealing mechanism and sealing history, the coupling of two effects of the fault-passage and sealing screen for oil/gas migration can be defined. Using the basic principle of petroleum system analysis, the paper systematically studies the hydrocarbon reservoir-forming mechanism and the time-space matching of the factors that affect the formation of reservoir, such as the space matching of active oil/gas matching of the active period of fault, the migration period of oil/gas and the formation period of trap. Through comprehensive analysis, the favorable exploration targets are selected in selected in the mountain front.

商都盆地二氧化碳气成藏条件研究

The bedding sequences, based on the results from others, have been constructed by geological researches. Furthermore, the reservoir, gas-bearing characteristics and reservoir-blanket association have been increasingly understudied by the geological and seismic studies as well as the log data. The deep dynamics for the formation and development of Shangdu basin resulted from complicated fault system and its continued action have been obtained. The studies on the reservoir condition reveal that the mantle-derived magmatism provided the materials for the CO_2 gas reservoir after Paleogene Period and the huge regional fault not only control the evolution of basin and sedimentary but also pay a role as a passage of the CO_2. The sandstone of river course formed in Paleogene System, with very good reservoir condition, are widely developed in the study area. The blanket with good condition is composed by the basalt in Hannuoba Formation and lake facies shale of Shangdou Formation. Local structures and good encirclement are resulted from the different sedimentary environment and later differential sagging. All statements above demonstrate that there is a very good pool-forming condition for the CO_2. In addition, the high abundance of H_2 recognized during drill exploration are also of significance.More than 30 inorganic CO_2 gas reservoirs have been determined during the exploration for the oil-bearing basins in the eastern China, which are developed along the two sides of Tanlu Fault or within it. In which the CO_2 gas reservoir in Shangdou basin is an inorganic gas reservoir far away from Tanlu Fault. Thus the determination of the CO_2 gas reservoir in Shangdou basin is significant for sciences due to the first exploration for the inorganic CO_2 gas reservoir in our country. The geophysical exploration carried on the CO_2 gas reservoir is benefited for the research of prospecting techniques of CO_2 reservoir.