表层土壤中菲的紫外光降解研究

多环芳烃化合物(PAHs)由于致癌、致畸和致突变而受到广泛关注。本实验以多环芳烃菲(Phe)为目标污染物,研究了温度、腐植酸和紫外辐射强度对Phe光降解的影响并对不同因素对降解动力学的影响作了研究。结果表明,Phe的降解在20℃到30℃范围内,随着温度的升高,光降解率增加;腐植酸在Phe污染土壤的光降解中起敏化作用,可显著促进光解,腐植酸浓度为5mg·kg-1足以达到敏化的效果;Phe光降解速率常数随辐射强度的降低而降低,呈正相关,光解的半衰期随着辐射强度的降低而增加,呈负相关。

共基质对10株细菌降解苯并芘的作用研究

从石油污染的污泥中分离驯化出10株细菌(SB01～SB10),利用生物摇床实验对其降解苯并芘(BaP)的效能进行试验,研究了有(或无)共基质(葡萄糖Glu,或菲PHE)对细菌降解BaP的影响,并采用ANOVA和Tukey多重比较进行分析。结果表明(,1)当以BaP为惟一碳源和能源且BaP初始浓度为50mg·L-1时(MS1),SB01的降解率最高,5d可降解31.0%;以Glu为共代谢基质时(MS2),SB09的降解率最高,可达36.9%;以PHE为共代谢基质时(MS3),SB01对BaP的降解率为46.0%。(2)Glu对SB01、SB02、SB03、SB07、SB10降解BaP有抑制作用,对SB01抑制作用最明显,使SB01的降解率降低了13.1%,Glu对SB05,SB08降解率无明显促进或抑制作用。(3)PHE对细菌降解BaP均表现出促进作用,对SB01的促进作用最明显,使其降解率提高15.0%。(4)Glu对SB09的促进作用大于PHE的促进作用,而对SB06,PHE的促进作用大于Glu。

共基质对10株细菌降解芘的作用

从石油污染的污泥中分离出10株细菌(SB01-SB10),研究了有(或无)共基质(葡萄糖Glu,或菲PHE)对细菌降解芘(PYR)的影响.结果表明:当以PYR为唯一碳源和能源时(MS1),SB01的PYR降解率最高,5d可降解30.4%;以Glu为共代谢基质时(MS2),SB09的PYR降解率最高,可达37.7%;以PHE为共代谢基质时(MS3),SB10的PYR降解率为50.2%.Glu抑制SB01、SB03对PYR的降解,对SB01抑制作用最明显,使SB01的PYR降解率降低7.9%;Glu对SB02、SB07、SB08、SB10降解率无明显促进或抑制作用.PHE对细菌降解PYR均有促进作用,对SB10的促进作用最明显,使其降解率提高29.8%.Glu与PHE对SB04和SB09降解PYR的促进作用无显著差异,而对其它各菌株而言,PHE对PYR降解的促进作用大于Glu.

生物反应器法处理PAHs污染土壤的研究

利用自行设计的生物泥浆反应器研究了多环芳烃 (PAHs)污染土壤生物修复技术 .结果表明 ,在相同环境条件下 ,污染物自身的理化性质是影响生物修复的关键因素 ,苯环越多、分子量越大 ,越难以被微生物利用 ,故菲 (PHE)比芘 (PY)具有更高的污染可修复性 .温度、空气流量是重要的调控因子 .本实验中 ,生物泥浆反应器处理PAHs污染土壤选择的最佳运行工艺参数是 :温度 2 0～ 30℃ ,水土比 2∶1,空气流量8L·h-1·L-1,接种量 5 0g·kg-1.该工艺参数为生物泥浆反应器技术实用化及其他相关研究工作的深入开展提供了理论依据

Dewetting behavior of polystyrene film filled with (C6H5C2H4NH3)(2)PbI4

The dewetting behavior of thin (about 30 nm) polystyrene (PS) films filled with different amount of (C6H5C2H4NH3)(2)PbI4 (PhE-PbI4) on the silicon substrate with a native oxide layer was investigated. For different additive concentrations, PhE-PbI4 showed different spatial distributions in the PS films, which had a strong influence on the film wettability, dewetting dynamics, and mechanism. With 0.5 wt % additive, PhE-PbI4 formed a noncontinuous diffusion layer, which caused a continuous hole nucleation in the film. With about 1 wt % additive, a continuous gradient distribution layer of PhE-PbI4 formed in the film, which inhibited the dewetting.

Systematic study of the transfer of amino acids across the water/1,2-dichloroethane interface facilitated by dibenzo-18-crown-6

Facilitated ion transfer reactions of 20 amino acids with di.benzo-18-crown-6 (DB18C6) at the water/1,2-dichloroethane (W/DCE) interfaces supported at the tips of micro- and nano-pipets were investigated systematically using cyclic voltammetry. It was found that there were only 10 amino acids, that is, Leu, Val, Ile, Phe, Trp, Met, Ala, Gly, Cys, Gln (in brief), whose protonated forms as cations can give well-defined facilitated ion transfer voltammograms within the potential window, and the reaction pathway was proven to be consistent with the transfer by interfacial complexation/dissociation (TIC/TID) mechanisms. The association constants of DB 18C6 with different amino acids in the DCE (beta(0)), and the kinetic parameters of reaction were evaluated based on the steady-state voltammetry of micro- or nano-pipets, respectively The experimental results demonstrated that the selectivity of complexation of protonated amino acid by DB18C6 compared with that of alkali metal cations was low, which can be attributed to the vicinal effect arising from steric hindrance introduced by their side group and the steric bulk effect by lipophilic stabilization.

Circular dichroism and resonance Raman comparative studies of wild type cytochrome c and F82H mutant

The UV-visible, circular dichroism (CD), and resonance Raman (RR) spectra of the wild type yeast iso-1-cytochrome c (WT) and its mutant F82H in which phenylalanine-82 (Phe-82) is substituted with His are measured and compared for oxidized and reduced forms. The CD spectra in the intrinsic and Soret spectral region, as well as RR spectra in high, middle, and low frequency regions, are discussed. From the analysis of the spectra, it is determined that in the oxidized F82H the two axial ligands to the heme iron are His-18 and His-82 whereas in the reduced form the sixth ligand switches from His-82 to Met-80 providing the coordination geometry similar to that of WT. Based on the spectroscopic data, the conclusion is that the porphyrin macrocycle is less distorted in the oxidized F82H compared to the oxidized WT. Similar distortions are present in the reduced form of the proteins. Frequency shifts of Raman bands, as well as the decrease of the or-helix content in the CD spectra, indicate more open conformation of the protein around the heme. (C) 2000 John Wiley & Sons, Inc.

Electrospray ionization mass spectrometry of cyclodextrin complexes with amino acids in incubated solutions and in eluates of gel permeation chromatography

1:1 complexes of beta-cyclodextrin (CD) with three amino acids (Gly, Phe and Trp) have been detected as ions in the gas phase using infusion positive and negative ion electrospray ionization mass spectrometry (ESI-MS). In contrast with the positive ion ESI mass spectra of simple aqueous solutions, the aggregates and adducts usually formed in the ESI process did not appear in the positive ion ESI spectra of solutions buffered with ammonium acetate (NH4Ac), even at higher analyte concentrations, These studies suggest that addition of buffer and/or use of a low analyte concentration should be used to overcome formation of aggregates and metal ion adducts in such mass spectrometry studies. Also, the deprotonated complexes are dissociated by collision induced dissociation (CID) to form an abundant product ion, the deprotonated CD, requiring transfer of a proton to the amino acid carboxyl group, To understand formation of complexes in the gas phase, gel permeation chromatography (GPC) was used to separate free amino acids (AAs) from complexes in an incubated solution. The ESI mass spectra of the GPC fractions show the presence of 1:1 complexes of both CD-aromatic amino acids and CD-aliphatic amino acids. Compared with CD-aliphatic amino acid complexes, CD-aromatic amino acid complexes appear to be destabilized in the gas phase, possibly because the hydrophobic interaction which binds the aromatic group of amino acids in the CD cavity in solution may become repulsive when solvent evaporates from the droplets during the electrospray process, whereas those complex ions formed as proton bound dimers are stabilized by electrostatic forces, the major binding force for such complexes in the gas phase. In addition, the GPC technique coupled with off-line ESI-MS can rapidly separate CD complexes by size, and provides some information on the character of the complexes in solution. (C) 1998 John Wiley & Sons, Ltd.

光学活性芳族氰醇的合成及其稳定性的研究

光学活性芳族氰醇以及由它转变而成的α-羟基酸、α-羟基酯、α-羟基酮和β-羟基胺等光学活性异构体都是重要的农药和医药中间休,从实用观点看,利用催化不对称合成来制取光活性氰醇,更具有重要意义。近年来,环状二肽Cyclo[L(D)-Phe-L(D)-His]用于催化芳族氰醇的不对称合成,由于具有与D-羟腈酶相类似的高活性和高对映选择性,尤为

The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration

Sulfide: quinone oxidoreductase (SQR) is a flavoprotein with homologues in all domains of life except plants. It plays a physiological role both in sulfide detoxification and in energy transduction. We isolated the protein from native membranes of the hyperthermophilic bacterium Aquifex aeolicus, and we determined its X-ray structure in the "as-purified,'' substrate-bound, and inhibitor-bound forms at resolutions of 2.3, 2.0, and 2.9 angstrom, respectively. The structure is composed of 2 Rossmann domains and 1 attachment domain, with an overall monomeric architecture typical of disulfide oxidoreductase flavoproteins. A. aeolicus SQR is a surprisingly trimeric, periplasmic integral monotopic membrane protein that inserts about 12 angstrom into the lipidic bilayer through an amphipathic helix-turn-helix tripodal motif. The quinone is located in a channel that extends from the si side of the FAD to the membrane. The quinone ring is sandwiched between the conserved amino acids Phe-385 and Ile-346, and it is possibly protonated upon reduction via Glu-318 and/or neighboring water molecules. Sulfide polymerization occurs on the re side of FAD, where the invariant Cys-156 and Cys-347 appear to be covalently bound to polysulfur fragments. The structure suggests that FAD is covalently linked to the polypeptide in an unusual way, via a disulfide bridge between the 8-methyl group and Cys-124. The applicability of this disulfide bridge for transferring electrons from sulfide to FAD, 2 mechanisms for sulfide polymerization and channeling of the substrate, S2-, and of the product, S-n, in and out of the active site are discussed.

Complete mitochondrial genome of the sea cucumber Apostichopus japonicus (Echinodermata: Holothuroidea): The first representative from the subclass Aspidochirotacea with the echinoderm ground pattern

Complete mitochondrial genome plays an important role in the accurate revelation of phylogenetic relationships among metazoans. Here we present the complete mitochondrial genome sequence from a sea cucumber Apostichopus japonicus (Echinodermata: Holothuroidea), which is the first representative from the subclass Aspidochirotacea. The mitochondrial genome of A. japonicus is 16,096 bp in length. The heavy strand consists of 31.8% A, 20.2% C, 17.9% G, and 30.1% T bases (AT skew = 0.027: GC skew = 0.062). It contains thirteen protein-coding genes (PCGs), twenty-two transfer RNA genes, and two ribosomal RNA genes. There are a total of 3793 codons in all thirteen mitochondrial PCGs, excluding incomplete termination codons. The most frequently used amino acid is Leu (15.77%), followed by Set (9.73%), Met (8.62%), Phe (7.94%), and Ala (7.28%). Intergenetic regions in the mitochondrial genome of A. japonicus are 839 bp in total, with three relatively large regions of Unassigned Sequences (UAS) greater than 100 bp. The gene order of A. japonicus is identical to that observed in the five studied sea urchins, which confirms that the gene order shared by the two classes (Holothuroidea and Echinoidea) is a ground pattern of echinoderm mitochondrial genomes. Bayesian tree based on the cob gene supports the following relationship: (outgroup, (Crinoids, (Asteroids, Ophiuroids, (Echinoids, Holothuroids)))). (C) 2009 Elsevier B.V. All rights reserved.

The complete mitochondrial genome of the mantid shrimp Oratosquilla oratoria (Crustacea: Malacostraca: Stomatopoda): Novel non-coding regions features and phylogenetic implications of the Stomatopoda

The complete mitochondrial (mt) genome sequence of Oratosquilla oratoria (Crustacea: Malacostraca: Stomatopoda) was determined; a circular molecule of 15,783 bp in length. The gene content and arrangement are consistent with the pancrustacean ground pattern. The mt control region of O. oratoria is characterized by no GA-block near the 3' end and different position of [TA(A)]n-blocks compared with other reported Stomatopoda species. The sequence of the second hairpin structure is relative conserved which suggests this region may be a synapomorphic character for the Stomatopoda. In addition, a relative large intergenic spacer (101 bp) with higher A + T content than that in control region was identified between the tRNA(Glu) and tRNA(Phe) genes. Phylogenetic analyses based on the current dataset of complete mt genomes strongly support the Stomatopoda is closely related to Euphausiacea. They in turn cluster with Penaeoidea and Caridea clades while other decapods form a separate group, which rejects the monophyly of Decapoda. This challenges the suitability of Stomatopoda as an outgroup of Decapoda in phylogenetic analyses. The basal position of Stomatopoda within Eumalacostraca according to the morphological characters is also questioned. (C) 2010 Elsevier Inc. All rights reserved.

八株海洋微生物次级代谢产物的研究

本论文选取4株胶州湾海洋放线菌和4株条斑紫菜丝状体相关丝状真菌，进行了次级代谢产物的分离纯化与鉴定，共得到78个单体化合物，其中10个为新颖结构。对部分纯化合物进行了抑菌，抗肿瘤活性测试，并对菌株进行了菌种鉴定。具体结果如下： 从胶州湾放线菌M491，M097，M361和M353得到40个单体化合物，其中6个为新颖结构化合物。从M491分离到14个单体化合物，包括2个新结构倍半萜15-hydroxy-T-muurolol (1a)和11,15-dihydroxy-T-muurolol (1b)，2个首次报道的微生物来源的倍半萜T-muurolol (2b)和3α-hydroxy-T-muurolol (2c)，2个新颖结构大环内酯chalcomycin C (7)和chalcomycin D (8)。制备了3-oxo-T-muurolol (2a)单晶体，纠正了前人发表的错误结构。从M353分离得到10个化合物，包括2个新颖倍半萜5-hydroxy-epi-isozizaene (28)和5,14-dihydroxy-isozizaene (30)。自M097和M361分别分离得到12个，4个已知结构化合物。 从健康条斑紫菜丝状体分离得到了12株真菌。从优势附生菌N5分离得到了12个化合物，包括phenylacetic acid (42)，p-hydroxyphenylethyl alcohol (43)和L-β-phenyllactic acid (49)等广谱抗生素和紫菜生长调节剂。 对分离自白斑病条斑紫菜丝状体真菌N27，EF8，GA4进行了次级代谢产物研究，分离得到38个单体化合物。从GA4分离得到了16个化合物，4个为新结构化合物，包括1个酰脲类化合物hualyzin (62)和3个phenalenone族新化合物7-methyl isonorherqueinone (69)，7,8-dimethyl atrovenetin (70)和8-methyl-deoxyherqueinone (73)。从真菌N27和EF8分别分离得到12个和2个已知结构化合物。 采用MTT法，对37株人体肿瘤细胞株活性表明：chalcomycin C (7)和chalcomycin D (8)具有非常强的细胞毒活性，其平均IC50分别为0.027 μg/mL和0.007 μg/mL。7,8-Dimethyl atrovenetin (71)和8-methyl deoxyherqueinone (73)具有中等细胞毒活性，其平均IC50分别为5.1 μg/mL和0.7 μg/mL。 此外，本文首次报道了几个已知化合物的细胞毒活性，分别是chalcomycin （0.015 μg/mL），kalamycin (0.06 µg/mL)，(+)-homononactic acid（1.9 µg/mL），(+)-nonactic acid（2.3 µg/mL），griseoviridin（3.9 µg/mL），cyclo（L-Trp-L-Phe）（3.3 µg/mL），WIN 64821（5.8 µg/mL）和3,5-dihydroxy-2-methyl-4-pyrone（3.3 µg/mL）。 菌种鉴定结果表明：M353归属链霉菌，GA4，N27归属青霉属，EF8归属曲霉属，N5为枝孢霉属。

The distribution, enrichment and source of potential harmful elements in surface sediments of Bohai Bay, North China

A geochemical study of Bohai Bay surface sediments was carried out to analyze the potential harmful element (PHE: Ge, Mo, In, Sn, Sb,Te, Tl, Bi and V) concentrations, transportation and deposition, enrichment factors and sources. Germanium, Mo, In, Sn, Sb, Te, Tl, Bi and V concentrations in the surface sediments were: 1.43-1.71, 0.52-1.43, 0.04-0.12, 2.77-4.14, 1.14-2.29, 0.027-0.085, 0.506-0.770, 0.27-0.63 and 70.35-115.90 mu g/g, respectively. The distributions of total PHE concentrations, together with sequential extraction analyses, showed that the PHEs were mainly due to natural inputs from the continental weathering delivered to the bay by rivers and atmospheric transportation and deposition. However, high Mo, Sb, Te, Bi and V occurred in non-residual fractions, suggesting some anthropogenic inputs in addition to the natural inputs. Besides sources, the distributions of PHEs were influenced by the coupling of physical, chemical and biological processes. Enrichment factor (EF) was computed for each site for each element in order to assess the polluting elements and the degree of pollution at each site. Results revealed that the EFs were generally lower than 1.0, particularly for Ge, Mo, In, Sn, Tl and V; however, the EFs were higher (>1.5), particularly for Sb, Te and Bi, revealing moderate contamination. (C) 2010 Elsevier B.V. All rights reserved.

线形脑啡肽(N—Tyr~1—Gly~2—Gly~3—Phe~4—Leu~5)的NMR溶液构象研究

本文在Bruker AM-400 NMR谱仪上,在不同温度下研究了线形脑啡肽(N-Tyr~1-Gly~2-Gly~3-Phe~4-Leu~5)在DMSO中的NMR溶液构象。由NMR测试结果,得到了NH化学位移温度梯度系数、扭转角φ、χ＇约束和~1H-~1H NOE距离约束,用目标函数法计算了脑啡肽的溶液构象,分析了优势边链构象。研究结果指明了多肽骨架的柔变性且处于构象平衡中。