Abundance of Calanus sinicus across the tidal front in the Yellow Sea, China

The abundance of Calanus sinicus eggs, nauplii, copepodites and adults and chlorophyll a (Chl-a) concentration were studied across tidal fronts in October 2000, and May and June 2001 in the Yellow Sea, China. The aim of the study was to evaluate the role of tidal fronts in the ecology of C. sinicus. The hydrographic tidal fronts were identified by the horizontal temperature gradient in the bottom layer and the temperature profiles across the fronts. The survey results showed that the concentration of Chl-a was high in the vicinity of the fronts, particularly in spring and early summer. The abundance of C. sinicus eggs and nauplii was usually higher in the tidal fronts than in the adjacent areas. In May and June 2001, the abundance of copepodites and adults of C. sinicus peaked in the tidal front. In June 2001 and October 2000, many copepodites and adults were found in stratified region.

Inheritance of 15 microsatellites in the Pacific oyster Crassostrea gigas: segregation and null allele identification for linkage analysis

Microsatellites were screened in a backcross family of the Pacific oyster, Crassostrea gigas. Fifteen microsatellite loci were distinguishable and polymorphic with 6 types of allele-combinations. Null alleles were detected in 46.7% of loci, accounting for 11.7% of the total alleles. Four loci did not segregate in Mendelian Ratios. Three linkage groups were identified among 7 of the 15 segregating loci. Fluorescence-based automated capillary electrophoresis (ABI 310 Genetic Analyzer) that used to detect the microsatellite loci, has been proved a fast, precise, and reliable method in microsatellite genotyping.

PCR-DGGE analysis of intestinal bacteria and effect of Bacillus spp. on intestinal microbial diversity in kuruma shrimp (Marsupenaeus japonicus)

In this study, the intestinal microbiota of kuruma shrimp (Marsupenaeus japonicus) was examined by molecular analysis of the 16S rDNA to identify the dominant intestinal bacteria and to investigate the effects of Bacillus spp. on intestinal microbial diversity. Samples of the intestines of kuruma shrimp fed normal feed and Bacillus spp. amended feed. PCR and denaturing gradient gel electrophoresis (DGGE) analyses were then performed on DNA extracted directly from the guts. Population fingerprints of the predominant organisms were generated by DGGE analysis of the universal V3 16S rDNA amplicons, and distinct bands in the gels were sequenced. The results suggested that the gut of kuruma shrimp was dominated by Vibrio sp. and uncultured gamma proteobacterium. Overall, the results of this study suggest that PCR-DGGE is a possible method of studying the intestinal microbial diversity of shrimp.

CE determination of 2-(9-carbazole)ethyl chloroformate-labeled oligopeptides

A pre-column derivatization method for sensitive determination of oligopeptides, using the tagging reagent 2-(9-carbazole)ethyl chloroformate (CEOC-Cl) followed by capillary electrophoresis (CE) with diode-array detection, has been developed. Maximum yield close to 100% were observed when a three to fourfold molar excess of reagent was used at pH 9.0-10.0. Excess reagent was extracted with n-hexane-ethyl acetate 9:1-10:1 (v/v); this enabled direct analysis using CE with no significant disturbance from the major fluorescent reagent degradation by-products. The effects on the results of buffer pH and of SDS and organic modifier concentrations were examined. Good baseline resolution in the separation of five CEOC-peptides was achieved with a 48.5-cm total length (effective length 40 cm) 50-mu m inner diameter capillary column.

不同基板预热温度对激光金属沉积成形过程温度场的影响

为降低成形过程的热应力,抑制成形过程裂缝的产生,减小成形过程试样和基板的翘曲变形,激光金属沉积成形往往需要进行基板预热,因此研究不同基板预热温度对激光金属沉积成形过程温度场的影响具有非常重要的意义.根据有限元分析中的"单元生死"技术,利用APDL编程建立了基板预热对激光金属沉积成形过程温度场影响的三维多道多层数值模拟模型,详细分析了基板未预热和分别预热到200,300,400,500,600℃时对沉积成形过程温度场和温度梯度的影响.通过中国科学院沈阳自动化研究所自行研制的激光金属沉积成形系统和基板预热系统,在与模拟过程相同的参数下,利用镍基合金粉末在基板未预热和分别预热到300,400,500,560℃时进行了成形试验,试验结果跟数值模拟结果吻合较好.

塔里木盆地塔中地区寒武-奥陶系烃源岩古地温及成烃演化史研究

The present maturity of Cambrian and Ordovician source rocks in Tazhong area, Tarim basin, is studied using several organic petrology methods and conodont CAI method. The highest palaeotemperature that the Cambrian-Ordovician undergone is revealed by Laser Roman Microprobe (LRM) analysis and by simulating experiment of the kerogen chemical kinetics. In according to all above study, the thermal history of Cambrian and Ordovician is reconstructed based on numerical simulating approaches. The characteristics of secondary hydrocarbon generating are studied by inclusions analysis. The reflectances of the samples in the drills located in Tazhong area show that the maturities of Cambrian source rocks are in the stages of condense oil-dry gas, and that of Ordovician source rocks range from peak of oil generating to wet gas stage. The palaeotemperature data of Cambrian-Orovician source rocks from well Tacan 1, based on LRM analysis, are in coincidence with that from other methods. Also are the palaeotemperature data of Cambrian-Orovician source rocks in well Tacan 1 based on the simulating experiments of kerogen pyrolysis, similar to the homogenization temperatures of inclusions in the source rocks. Aaccording to the vitrinite inflectance data of the TZ12 well and Tacan 1 well, the paleotemperature gradients are analysized and reconstructed. These data show that the paleotemperature gradient in Tazhong area was the highest during Cambrian-Ordovician period, it was up to 3.5°C/100m. Following, the temperature gradient descended gradually and it reached to the lowest at present (2.2°C/100m). The histories of maturation and hydrocarbon generation of Cambrian and Ordovician source rocks in Tazhong area are researched systematically and quantitatively, the results show that periods of oil generation from Cambrian and Ordovician source rocks lasted for a long time from Ordovician to Carbonferious periods because the central Cambrian stratum in the north slope of Tazhong area is buried differently in depth. The top of the Cambrian entered into the peak of oil generation in middle-late Ordovician, and most area of the north slope of Tazhong area entered into the peak of oil generation in Carbonferious period, and on the uplift belt some of source rocks entered into the peak of oil generation in Permian period. In early Devonian, the central of the Lower Ordovician source rocks near the Manjiaer depression reached the peak of oil generation and near the top of the Tazhong uplift did not reached the peak of oil generation until early Cretaceous. The middle-upper Ordovician entered into the peak of oil generation in early-middle Jurassic. The time of the middle-upper Ordovician in the top of the uplift belt entering into the peak of oil generation was delayed, because the source rock was buried shallowly, and it did not reached the peak of oil generation until middle Cretaceous. Middle-upper Ordovician in the top of the north slope has been in the peak of oil generation now, it is consistent with the maturity (1.0-1.2%Ro) of the source rocks. The characteristics of the inclusions formed by kerogens are different from that by crystal-enclosed organic matters(OM) during secondary hydrocarbon generation of Cambrian and Ordovician source rocks. The secondary hydrocarbon generation mainly occurred in Mesozoic-Cenozoic period, in an area of about 9000km2 in the north slope. The intensity of the secondary hydrocarbon generation of Cambrian and Ordovician is up to 21kg/torg and 36kg/torg) respectively. Using the staged gas chromatography, the high-over maturated carbonate source rocks are analysized to release the adsorbed OM, inclusions OM and crystal-enclosed OM, respectively, and to evaluate their relative contributions to secondary hydrocarbon generation. The three periods of oil and gas migration and petroleum pools formation in Tazhong area are determined according to organic inclusions and solid bitumen.

Electrophoretic migration behavior of DNA fragments in polymer solution

A newly developed polymer coil shrinking theory is described and compared with the existing entangled solution theory to explain electrophoretic migration behaviour of DNA in hydroxypropylmethylcellulose (HPMC) polymer solution in buffer containing 100 mM tris(hydroxymethyl)aminomethane 100 mM boric acid, 2 mm ethylenediaminetetraacetic acid at pH 8.3. The polymer coil shrinking theory gave a better model to explain the results obtained. The polymer coil shrinking concentration, C-s, was found to be 0.305% and the uniform entangled concentration, C+, 0.806%. The existence of three regions (the dilute, semidilute, and concentrated solution) at different polymer concentrations enables a better understanding of the system to guide the selection of the best conditions to separate DNA fragments. For separating large fragments (700/800 bp), dilute solutions (HPMC < 0.3%) should be used to achieve a short migration time (10 min). For small fragments (200/300 bp), concentrated solutions are preferred to obtain constant resolution and uniform separation. The best resolution is 0.6% HPMC due to a combined interaction of the polymer coils and the entangled structure. The possibility of DNA separation in semidilute solution is often neglected and the present results indicate that this region has a promising potential for analytical separation of DNA fragments.

Alternative splicing of the FMR1 gene in human tissues of fetal and adult

To study the time- and tissue-specificity of alternative splicing of the FMR1 gene, we analyzed the alternative splicing pattern of the FMR1 gene in human tissues from adult and fetus using RT-PCR coupled with capillary electrophoresis. Seven alternative splicing variants of FMR1 were found in adult liver and lung. The major three alternative splicing variants of the FMR1 gene in all analyzed fetal tissues were same, though the number of minor isoforms and the relative abundance of major isoforms were different. The major difference of the alternative splicing pat tem between adult and fetus was in exon 12 and 17. The results suggest that the alternative splicing pattern of the FMR1 gene is non-tissue-specific in the same developmental stage and a developmental switch may be present.