Absorption characteristic and nonvolatile holographic recording in LiNbO3 : Cr : Cu crystals

The absorption characteristic of lithium niobate crystals doped with chromium and copper (Cr and Cu) is investigated. We find that there are two apparent absorption bands for LiNbO3:Cr:Cu crystal doped with 0.14 wt.% Cr2O3 and 0.011 wt.% CuO; one is around 480 nm, and the other is around 660 nm. With a decrease in the doping composition of Cr and an increase in the doping composition of Cu, no apparent absorption band in the shorter wavelength range exists. The higher the doping level of Cr, the larger the absorbance around 660 nm. Although a 633 nm red light is located in the absorption band around 660 nm, the absorption at 633 nm does not help the photorefractive process; i.e., unlike other doubly doped crystals, for example, LiNbO3:Fe:Mn crystal, a nonvolatile holographic recording can be realized by a 633 nm red light as the recording light and a 390 nm UV light as the sensitizing light. For LiNbO3:Cr:Cu crystals, by changing the recording light from a 633 nm red light to a 514 nm green light, sensitizing with a 390 nm UV light and a 488 nm blue light, respectively, a nonvolatile holographic recording can be realized. Doping the appropriate Cr (for example, N-Cr = 2.795 X 10(25)m(-3) and N-Cr/N-Cu = 1) benefits the improvement of holographic recording properties. (c) 2005 Optical Society of America.

复折射率光纤传输特性分析的Davidenko方法

增益或损耗对光纤的传输特性影响很大。使用Davidenko方法对复折射率光纤的传输特性进行了分析。研究了复折射率纤芯或复折射率包层阶跃光纤,通过比较发现,使用Davidenko方法得到的解与精确解符合得很好。对于芯区为复折射介质的光纤,HE11模与LP01模增益值偏差约为0.6%;对于包层区为复折射率介质的光纤,HE11模与LP01模增益值偏差约为2%。实际研究工作中,为了得到更精确的结果,应该求解全矢量的复本征方程,尤其是包层具有增益或损耗的光纤。

Investigation on the static recording characteristic of super-resolution near-field structure with antimony mask layer

Static recording characteristic of super-resolution near-field structure with antimony (Sb) is investigated in this paper. The recording marks are observed by a scanning electron microscopy (SEM), a high-resolution optical microscopy with a CCD camera and an atomic force microscopy (AFM). The super-resolution mechanism is also analyzed based on these static recording marks. Results show that the light reaching on recording layer is composed of two parts, one is the linear transmissive light (propagating field) and the other is the nonlinear evanescent light in the optical near field. The evanescent light may be greatly enhanced in the center of the spot because Sb will transit from a semiconductor to a metal when it is melted under the high laser power irradiation. This local melted area in the spot center may be like a metal tip in the optical near field that can collect and enhance the information that is far beyond the diffraction limit, which leads to the super-resolution recording and readout. (c) 2005 Elsevier Ltd. All rights reserved.

Focusing properties of concentric piecewise cylindrical vector beam

The focusing properties of a concentric piecewise cylindrical vector beam is investigated theoretically in this paper. The beam consists of three portions with different and changeable phase retardation and polarization. Numerical simulations show that the evolution of the focal shape is very considerable by changing the radius and polarization rotation angle of each portion of the vector beam. And some interesting focal spots may occur, such as two- or three-peak focus, dark hollow focus, ring focus, and two-ring-peak focus. Corresponding gradient force patterns are also computed, and novel trap patterns, including cup shell shape trap with one trap at its each side along axis, rectangle shell shape trap with one trap at its each side, dumbbell optical trap, spherical shell optical trap, may occur, which shows that the concentric piecewise cylindrical vector beam can be used to construct controllable optical tweezers. (c) 2006 Elsevier GmbH. All rights reserved.

Analysis of characteristic matrix for a uniaxially birefringent thin film

As the principal section consistent with the principal plane, electromagnetic propagation in a uniaxially birefingent thin film can be described with a concise 2 x 2 characteristic matrix, in which the refractive indices of the forward and backward propagating extraordinary rays are different and dependent. In this letter, based on Huygen's construction, the refractive indices and effective optical admittances of the forward and backward propagating extraordinary rays are discussed further, and the 2 x 2 characteristic matrix is simplified. Furthermore, the input optical admittance, reflectance and transmittance of assembly is presented, just as an isotropic thin film. The result can be extended to the general case of multilayer uniaxially birefringent thin films with their optic axes in the incident plane. Copyright (c) EPLA, 2007.

应用SVM预测杜鹃属（Rhododendron L.）在中国的潜在分布中心

杜鹃属(Rhododendron L.)是中国种子植物中最大的属，其现代分布和分化中心是我国西南部的横断山区和东喜马拉雅地区。我国西部、西南部的云南、四川、西藏等地共有杜鹃达450种，仅特有种就有约300种。对杜鹃属分布的深入研究是横断山区生物多样性保护不可缺少的重要部分。 由于物种分布与环境因子之间存在着紧密的联系，利用环境因子作为预测物种分布模型的变量是当前最普遍的建模思路。但是绝大多数物种分布预测模型都遇到了难以解决的“高维小样本”问题――模型在标本数据不足时无法给出合理的预测，或者模型无法处理大量的环境变量。机器学习领域的理论和实践已经证明，基于结构风险最小化原理的支持向量机(Support Vector Machine, SVM)算法非常适合“高维小样本”的分类问题。为了探索其应用在物种分布预测问题上的可能性，本文创新性的实现了基于SVM算法的物种分布预测系统。然后，本文以30个杜鹃属(Rhododendron L.)物种为检验对象，利用其标本数据和11个1km的栅格环境变量图层作为模型变量，预测其在中国的潜在分布区。本文通过全面的模型评估——专家评估，ROC (Receiver Operator Characteristic)曲线和曲线下方面积AUC (Area Under the Curve)——来比较模型的性能。试验结果表明，我们所实现的以SVM为核心的物种分布预测系统无论在计算速度还是预测效果上都远远优于当前广泛使用的GARP (Genetic Algorithm for Rule-Set Prediction)预测系统。 之后，本文进一步探讨了SVM预测系统预测效果与环境变量维数和标本点个数的关系。试验结果表明，对于只有少量标本点的物种SVM的预测结果仍然具有相当的合理性。由此可见， SVM预测系统很好的解决了以前众多模型无法克服的稀有种和标本点稀少的物种的潜在分布区模拟问题。同时本文发现大的环境维数（高维）对于物种潜在分布区的预测有着决定性的作用，因此模型处理高维问题的能力显得至关重要。 最后，我们使用中国所有可获取的杜鹃属标本数据，以及83个1km的栅格环境变量图层，对400种杜鹃属物种的潜在分布区进行预测。根据预测出来的物种潜在分布区，我们得到了中国杜鹃属物种潜在多样性分布格局，特有物种潜在多样性分布格局，濒危杜物种潜在的分布格局，各亚属物种潜在分布格局，以及不同生活型物种潜在多样性分布格局。这些分布区图不仅可以对杜鹃属起源研究提供分析验证的条件，还能为其引种、保护和新种的搜寻提供有利的空间依据。

In vitro construction of a recombinant human embryonic brain-derived neurotrophin-4 gene and pEGFP-N1 vector

BACKGROUND: Neurotrophin-4 (NT-4) can promote neuronal growth, development, differentiation, maturation, and survival. NT-4 can also improve recovery and regeneration of injured neurons, but cannot pass through the blood-brain barrier, which limits its ac

Analysis of the characteristic sequence of intein and revision of its motifs

Since the first intein (Sce VMA) was found in Saccharomydes cerevisiae ATPases gene in 1990, more and more inteins were identified. It is necessary to analyze the new inteins to understand the sequence charateristics of inteins. By searching protein and n

Identification, characteristic and phylogenetic analysis of type II DNA topoisomerase gene in Giardia lamblia

The genes encoding type II DNA topoisomerases were investigated in Giardia lamblia genome, and a type IIA gene, GlTop 2 was identified. It is a single copy gene with a 4476 by long ORF without intron. The deduced amino acid sequence shows strong homology to eukaryotic DNA Top 2. However, some distortions were found, such as six insertions in the ATPase domain and the central domain, a similar to 100 as longer central domain; a similar to 200 as shorter C-terminal domain containing rich charged residues. These features revealed by comparing with Top 2 of the host, human, might be helpful in exploiting drug selectivity for antigiardial therapy. Phylogenetic analysis of eukaryotic enzymes showed that kinetoplastids, plants, fungi, and animals were monophyletic groups, and the animal and fungi lineages shared a more recent common ancestor than either did with the plant lineage; microsporidia grouped with fungi. However, unlike many previous phylogenetic analyses, the "amitochondriate" G. lamblia was not the earliest branch but diverged after mitochondriate kinetoplastids in our trees. Both the finding of typical eukaryotic type IIA topoisomerase and the phylogenetic analysis suggest G. lamblia is not possibly as primitive as was regarded before and might diverge after the acquisition of mitochondria. This is consistent with the recent discovery of mitochondrial remnant organelles in G. lamblia.

Phylogenetic relationships among Trichodinidae (Ciliophora : Peritricha) derived from the characteristic values of denticles

The phylogenetic relationships among trichodinids remain obscure. As an important diagnostic marker, the morphology of the denticles in the adhesive disc as well as the adoral spiral has been widely used in generic discrimination and species identification of trichodinids. We studied the characters of denticles of the ten genera of Trichodinidae and the sole genus Urceolaria of Urceolariidae by using a quantitative method. The characteristic values were used to generate Manhattan distance, on which the dendrogram was based to construct with the Unweighted Paired Group Method using the Arithmetic mean (UPGMA). The investigations show that all the genera of the family Trichodinidae were clearly separate from the outgroup Urceolaria, and within the Trichodinidae: (i) Dipartiella grouped with Trichodinella and Tripartiella and lay in the closest position to the outgroup with a low dissimilarity, suggesting Dipartiella might be the most primitive genus in the family; (ii) Hemitrichodina clustered in a single clad and lay in the farthest position to the outgroup with the highest dissimilarity, indicating that it might be the most advanced genus; and (iii) the other 6 genera, Trichodina, Paratrichodina, Semitrichodina, Vauchomia, Pallitrichodina and Trichodoxa clustered in a big clad with very low dissimilarity, showing that they are closely related to each other. We discuss the evolutionary trend of the denticle and conclude that the denticles of the adhesive disc should be an apomorphic feature of the trichodinids and their changes could reflect the evolutionary tendencies of these ciliates.

Characteristic analysis of the optical delay in frequency response of resonant cavity enhanced (RCE) photodetectors

With consideration of the modulation frequency of the input lightwave itself, we present a new model to calculate the quantum efficiency of RCE p-i-n photodetectors (PD) by superimposition of multiple reflected lightwaves. For the first time, the optical delay, another important factor limiting the electrical bandwidth of RCE p-i-n PD excluding the transit time of the carriers and RCd response of the photodetector, is analyzed and discussed in detail. The optical delay dominates the bandwidth of RCE p-i-n PD when its active layer is thinner than several 10 nm. These three limiting factors must be considered exactly for design of ultra-high-speed RCE p-i-n PD.

Characteristic study of maximum modal gain of p-doped 1.3 mu m InAs/GaAs quantum dot lasers

We report an experimental and theoretical study of maximum modal gain of p-doped 1.3 mu m InAs/GaAs quantum dot (QD) lasers. The maximum modal gain of the QD laser with five stacks of QDs is as high as 17.5 cm(-1) which is the same as that of the undoped laser with identical structures. The expression of the maximum modal gain is derived and it is indicated that p-doping has no effect to the maximum modal gain. We theoretically calculated the maximum modal gain of the QD lasers and the result is in a good agreement with the experimental data. Furthermore, QDs with lower height or smaller aspect ratio are beneficial to achieving a greater maximum modal gain that leads to lower threshold current density and higher differential modal gain, which is good for the application of p-doped 1.3 mu m InAs/GaAs QD lasers in optical communications systems.