Differences in the rDNA-bearing chromosome divide the Asian-Pacific and Atlantic species of Crassostrea (Bivalvia, Mollusca)

Karyotype and chromosomal location of the major ribosomal RNA genes (rDNA) were studied using fluorescence in situ hybridization (FISH) in five species of Crassostrea: three Asian-Pacific species (C. gigas, C. plicatula, and C. ariakensis) and two Atlantic species (C. virginica and C. rhizophorae). FISH probes were made by PCR amplification of the intergenic transcribed spacer between the 18S and 5.8S rRNA genes, and labeled with digoxigenin-11-dUTP. All five species had a haploid number of 10 chromosomes. The Atlantic species had 1-2 submetacentric chromosomes, while the three Pacific species had none. FISH with metaphase chromosomes detected a single telomeric locus for rDNA in all five species without any variation. In all three Pacific species, rDNA was located on the long arm of Chromosome 10 (10q)-the smallest chromosome. In the two Atlantic species, rDNA was located on the short arm of Chromosome 2 (2p)-the second longest chromosome. A review of other studies reveals the same distribution of NOR sites (putative rDNA loci) in three other species: on 10q in C. sikamea and C. angulata from the Pacific Ocean and on 2p in C. gasar from the western Atlantic. All data support the conclusion that differences in size and shape of the rDNA-bearing chromosome represent a major divide between Asian-Pacific and Atlantic species of Crassostrea. This finding suggests that chromosomal divergence can occur under seemingly conserved karyotypes and may play a role in reproductive isolation and speciation.

Complete mitochondrial genome of the Asian paddle crab Charybdis japonica (Crustacea: Decapoda: Portunidae): gene rearrangement of the marine brachyurans and phylogenetic considerations of the decapods

Given the commercial and ecological importance of the Asian paddle crab, Charybdis japonica, there is a clearly need for genetic and molecular research on this species. Here, we present the complete mitochondrial genome sequence of C. japonica, determined by the long-polymerase chain reaction and primer walking sequencing method. The entire genome is 15,738 bp in length, encoding a standard set of 13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNA genes, plus the putative control region, which is typical for metazoans. The total A+T content of the genome is 69.2%, lower than the other brachyuran crabs except for Callinectes sapidus. The gene order is identical to the published marine brachyurans and differs from the ancestral pancrustacean order by only the position of the tRNA (His) gene. Phylogenetic analyses using the concatenated nucleotide and amino acid sequences of 13 protein-coding genes strongly support the monophyly of Dendrobranchiata and Pleocyemata, which is consistent with the previous taxonomic classification. However, the systematic status of Charybdis within subfamily Thalamitinae of family Portunidae is not supported. C. japonica, as the first species of Charybdis with complete mitochondrial genome available, will provide important information on both genomics and molecular ecology of the group.

Cold event at 5 500 a BP recorded in mud sediments on the inner shelf of the East China Sea

A 700-year record (1.0-1.5 a resolution) of the East Asian winter monsoon (EAWM), based on grain-size analysis and AMS(14)C dating of Core EC2005 from the inner-shelf mud wedge of the East China Sea (ECS), was compared with the Dongge stalagmite delta O-18 record during the mid-Holocene. The upper muddy section of Core EC2005 has been formed mainly by suspended sediments derived from the Changjiang (Yangtze) River mouth since 7.3 ka BP. High precipitation and a strengthened EAWM might have played key roles in the high sedimentation rate (1 324-1 986 cm/ka) between 5.9-5.2 ka BP. The EAWM strengthened when the Asian summer monsoon weakened, especially around 5 500 a BP, which corresponded to a worldwide cold event. The EAWM during the mid-Holocene shows statistically significant solar periodicities at 62 and 11 a. The 5 500 a BP cold event might be resulted from orbital forcing and changes in solar activity.

History and variability of Asian interior aridity recorded by eolian flux in the Chinese Loess Plateau during the past 7 Ma

Eolian flux in the Chinese Loess Plateau was reconstructed by measuring the dry bulk density and CaCO3 content of the late Cenozoic loess-paleosol-red clay sequences in the Lingtai profile. Comparison of eolian flux variation between the Lingtai profile and the ODP sites 885/886 in the North Pacific shows a significant wet-dry variability in addition to a gradual drying trend in the dust source regions in interior Asia. Especially, the increase of eolian fluxes from both continental and pelagic eolian sediments indicates a sharp drying of the dust source regions between 3.6 and 2.6 MaBP, which might be attributed to the tectonic uplift of the Tibetan Plateau, which cut down the moisture input to the interior Asia. The average value and variability of eolian flux are higher after 2.6 MaBP than before, which may be related to the Quaternary climatic fluctuations on the glacial-interglacial timescale after the commencement of major Northern Hemisphere Glaciations. The eolian fluxes of the Lingtai profile and Core V21-146 in northwest Pacific show a synchronous variation on the 10(4)-10(5) a timescale, indicating that the flux variations from both continental and marine records are closely correlated to the Quaternary climatic fluctuation forced by the ice volume changes on a global scale.

PALEOMONSOONS OF CHINA OVER THE LAST 130,000 YEARS - PALEOMONSOON RECORDS

The characteristics of the modern monsoon climate of China may be used as clues for recognizing the records of paleomonsoon climate. The present paper deals primarily with the various paleomonsoon records of the last 130,000 years in the southeast monsoon area. These records mainly come from the following three fields: (i) the historical, (ii) the geological, including loess-paleosol sequence, deserts, lakes, snowlines, timberlines, the phenomena of continental desertization and so on, and (iii) the biological, presented by vegetation a.d mammals. Among these records, the loess-paleosol sequence in the Loess Plateau reflects a climatic history characterized by alternation of two different climatic periods when the Asian winter monsoon and summer monsoon showed pronounced effects on environment, respectively.

Responses of summertime extreme wave heights to local climate variations in the East China Sea

We detected the responses of summertime extreme wave heights (H-top10, average of the highest 10% of significant wave heights in June, July and August) to local climate variations in the East China Sea by applying an empirical orthogonal function analysis to Htop10 derived from the WAVEWATCH- III wave model driven by 6 hourly sea surface wind fields from ERA-40 reanalysis over the period 1958-2002. Decreases in H-top10 in the northern East China Sea ( Yellow Sea) correspond to attenuation of the East Asian Summer Monsoon, while increases in the south are primarily due to enhancement of tropical cyclone activities in the western North Pacific.

Role of snow depth in spring of Tibetan Plateau in onset of South China Sea summer monsoon

The role of snow depth of Tibetan Plateau in the onset of South China Sea summer monsoon and the influence of ENSO on snow depth of Tibetan Plateau are investigated with use of data from ECMWF reanalysis and NCEP/NCAR reanalysis. The results are as follows: (1) The snow depth data from ECMWF reanalysis are tested and reliable, and can be used to study the influence of snow depth of Tibetan Plateau on the onset of South China Sea summer monsoon; (2) Anomaly of snow depth of Tibetan Plateau causes anomaly in air temperature and its contrast between the Indian Ocean and the continent resulting in easterly wind anomaly over 500 hPa and hence as well as in the atmospheric circulation in the lower layer. For the year of negative anomaly of snow depth a westerly wind anomaly with a cyclone pair takes place, while for positive anomaly of snow depth an easterly anomaly occurs with an anticyclone pair; (3) While positive anomaly of SST occurs in the eastern Pacific Ocean, positive anomaly of air pressure also takes place over the eastern Indian Ocean and the South China Sea, causing stronger meridional pressure gradient between the ocean and continent and then westerly wind anomaly. At the same time, the atmospheric pressure increases in the northern Tibetan Plateau, northerly wind gets stronger, and subtropical front strengthens. All of these are favorable for snowfall over Tibetan Plateau.

An approach to prediction of the South China Sea summer monsoon onset

In the present paper, correlation between the South China Sea summer monsoon (SCSSM) onset and heat content in the upper layer of the warm pool in the western Pacific Ocean is examined using the Scripps Institution of Oceanography dataset for the period of 1955-1998 and an approach to prediction the SCSSM onset is proposed. Correlation showes that there exists interdecadal variability of the SCSSM onset demarcated by 1970 with the largest correlation coefficient in the area west of the center of the warm pool rather than near its centers, implying certain effect from other factors involved besides ENSO. As the correlation is poor for the period before 1970, the heat content anomaly of the warm pool after 1970 is used to indicate early or late onset of the SCSSM beforehand. An ideal representative area (1A degrees x1A degrees) for the warm pool heat content was determined with its center at 3A degrees N/138A degrees E. The nearest TAO (TAO-Tropical Atmosphere Ocean-array) mooring to the center is at 2A degrees N/137A degrees E, and chosen to calculate the heat content for prediction. It is suggested that the TAO mooring at 2A degrees N/137A degrees E could be used to predict the SCSSM onset with the heat content in the upper layer, if the correlation between the SCSSM onset and the heat content of the warm pool runs like that of after 1970. On the other hand, if the situation does like the one before 1970, the representative station is determined at 13A degrees S/74A degrees E with relatively poor correlation, meaning that the warm pool in the western Pacific Ocean plays more important role in the SCSSM onset than the Indian Ocean.

大气季节内振荡对东亚夏季风活动的影响研究

利用ERA40逐日再分析资料、NCEP/NCAR2逐日再分析资料、中国740个测站日降水资料、上海台风研究所提供的西太平洋热带气旋资料、Kaplan等重建的月平均SSTA资料、NOAA逐日长波辐射（OLR）等资料，应用离散功率谱分析、带通滤波、EOF分析等统计方法，研究了东亚夏季风(EASM）的移动特征、东亚地区季节内振荡(ISO)的基本特征、季节内振荡对东亚夏季风活动的影响、季节内振荡对东亚夏季风异常活动的影响机理。主要结论如下： （1）综合动力和热力因素定义了可动态描述东亚夏季风移动和强度的指数，并利用该指数研究了东亚夏季风的爆发和移动的季节内变化及其年际和年代际变化特征。研究发现，气候平均东亚夏季风前沿分别在28候、33候、36候、38候、40候、44候出现了明显的跳跃。东亚夏季风活动具有显著的年际变率，主要由于季风前沿在某些区域异常停滞和突然跨越北跳或南撤引起，造成中国东部旱涝灾害频繁发生。东亚夏季风的活动具有明显的年代际变化，在1965年、1980年、1994年发生了突变，造成中国东部降水由“南旱北涝”向“南涝北旱”的转变。 （2）东亚季风区季节内变化具有10~25d和30~60d两个波段的季节内振荡周期，以30-60d为主。存在三个主要低频模态，第一模态主要表征了EASM在长江中下游和华北地区活动期间的低频形势；第二模态印度洋-菲律宾由低频气旋式环流控制，主要表现了ISO在EASM爆发期间的低频形势；第三模态主要出现在EASM在华南和淮河活动期间的低频形势。第一模态和第三模态是代表东亚夏季风活动异常的主要低频形势。 （3）热带和副热带地区ISO总是沿垂直切变风的垂直方向传播。因此，在南海-菲律宾东北风垂直切变和副热带西太平洋北风垂直切变下，大气热源激发菲律宾附近交替出现的低频气旋和低频反气旋不断向西北传播，副热带西太平洋ISO以向西传播为主。中高纬度地区，乌拉尔山附近ISO以向东、向南移动或局地振荡为主；北太平洋中部ISO在某些情况下向南、向西传播。 （4）季风爆发期，伴随着热带东印度洋到菲律宾一系列低频气旋和低频反气旋， 冷空气向南输送，10~25天和30~60天季节内振荡低频气旋同时传入南海加快了南海夏季风的爆发。在气候态下，ISO活动表现的欧亚- 太平洋（EAP）以及太平洋-北美（PNA）低频波列分布特征(本文提出的EAP和PNA低频波列与传统意义上的二维定点相关得到的波列不同)。这种低频分布形式使得欧亚和太平洋中高纬度的槽、脊及太平洋副热带高压稳定、加强，东亚地区的低频波列则成为热带和中高纬度ISO相互作用影响东亚夏季风活动的纽带。不同的阶段表现不同的低频模态，30~60d低频模态的转变加快了EASM推进过程中跳跃性；30-60d低频模态的维持使得EASM前沿相对停滞。 （5）30-60d滤波场，菲律宾海域交替出现的低频气旋和低频反气旋不断向西北传播到南海-西太平洋一带。当南海-西太平洋地区低频气旋活跃时，季风槽加强、东伸，季风槽内热带气旋（TC）频数增加；当南海-西太平洋低频反气旋活跃时，季风槽减弱、西退，TC处于间歇期，生成位置不集中。 （6）在El Nino态下，大气季节内振荡偏弱，北传特征不明显，但ISO由中高纬度北太平洋中部向南和副热带西太平洋向西的传播特征显著，东亚地区ISO活动以第三模态为主，EASM集中停滞在华南和淮河流域，常伴随着持续性区域暴雨的出现，易造成华南和江淮流域洪涝灾害，长江和华北持续干旱。在La Nina态下，大气季节内振荡活跃，且具有明显的向北传播特征，PNA低频波列显著，东亚地区ISO活动以第一模态单峰为主；EASM主要停滞在长江中下游和华北地区，这些地区出现异常持续强降水，华南和淮河流域多干旱；在El Nino态向La Nina态转换期，ISO活动以第一模态双峰为主，长江中下游常常出现二度梅。

黄土高原中部60万年来黄土—古土壤序列有机碳同位素研究

Vegetation is very sensitive to climate change. Carbon isotopes in paleosol have been widely used to contruct the propotion of plants using C3 and C4 photosynthetic pathways. δ13C of Loess organic matter were analyzed on the loess- paleosols samples from Jingchuan sections and Luochuan S4—S5 sequence. This paper presents a long carbon isotope time series, covering the last 600kyr. δ13C record of Loess organic matter in Jingchuan is correlated with marine oxygen isotope records. Basing on former research work, this paper discusses temperature, rainfall and P CO2 effect on δ13Corg value. In the interglacial periods, carbon isotope is more sensitive than other proxies and indicates several climate fluctuations. The main conclusions are as follows: 1. Obtained δ13C composition from paleosols and loess sediments in Jingchuan range of -20.0‰ to -24.6‰, the maximum biomass of C4 is 35%, indicating a C3 and C4 mixed steppe with C3 dominated. C4 plant is not always expansion during paleosols periods. The minimum values of Jingchuan section appeared in S4 soil, and the vegetation was almost pure C3 plant at that time. δ13Corg value in S5-2 is also lower than loess in S5, reaching the minimum valus of S5 soil. 2. PCO2 variation has little impact on δ13Corg value in interglacial periods for the last 600kyr. The correlation between δ13Corg value curve and magnetic susceptibility curve as proxy of summer monsoon in general, means summer monsoon drive C4 plant expansion during glacial and interglacial. 3. The lowerδ13Corg values in S4 and S5-2 appear at Jingchuan and Luochuan, suggest origin from woodland or C3 grassland. Whatever vegetation it is, indicate strengthened East Asian summer monsoon and increase of precipitation. C4 plant percentage is lower in S5-1 and S1 which have stronger summer monsoon, than S0 and S2. And it also indicates increase of precipitation.δ13Corg values has not always non-linearity correlation with summer monsoon. 4. The maximum entroy spectral analysis of δ13C values of the last 600kyr indicates there is 21 kyr cycles in Loess sequence. It means that summer monsoon in the Chinese Loess Plateau also has the precession cycles like its origin low latitude.

最近130ka来黄土物质化学风化强度的空间格局

Chemical weathering intensity of loess deposits is largely determined by three factors: chemical weathering in source regions, grain size and post-depositional weathering. The third factor is influenced by climatic conditions such as precipitation and temperature, and the dust sedimentation rate in the area of deposition. Previous studies have shown that the (CaO+MgO+Na2O)/TiO2 ratio of decarbonated residue from loess is independent of grain size changes and thus is a reliable proxy for chemical weathering. However, the validity of (CaO+MgO+Na2O)/TiO2 to describe changes in monsoon intensity requires further study. In this study, 48 sections over the last glacial-interglacial cycle on the Chinese Loess Plateau were sampled, and the major elemental concentrations of 248 decarbonated residue samples were measured to investigate the utility of the (CaO+MgO+Na2O)/TiO2 ratio as a proxy for changes in monsoon intensity. Results show that the (CaO+MgO+Na2O)/TiO2 ratio, is relatively more sensitive to climate change than other indexes independent of grain size, and is not affected substantially by sedimentation rate. Assuming the weathering regime is relatively stable in the loess source regions, the (CaO+MgO+Na2O)/TiO2 ratio is a reliable proxy for the intensity of summer monsoon. A decreasing (CaO+MgO+Na2O)/TiO2 ratio from northwest to southeast both in loess and paleosols indicates that the Chinese Loess Plateau is in the control of the East Asian summer monsoon during both interglacial and glacial times. In addition, the spatial distributions of (CaO+MgO+Na2O)/TiO2 ratios show a greater north-south gradient during interglacial periods than during glacial periods. This may suggest that the spatial precipitation gradient, controlled by the summer monsoon, is steeper during interglacials than in glacials.

巴丹吉林沙漠及其南缘地区的水化学和环境同位素特征与环境演变

The Badain Jaran Desert lies on the Alashan Plateau in western Inner Mongolia. Because of huge dunes, permanent lakes and on the northern fringe of the Asian summer monsoon, the Badain Jaran Desert has been drawing attentions of many experts. And they have made great progress in dune’s geomorphology, botany in desert, paleoclimate change and other study areas. We analyzed environmental isotope and ion chemistry in lakes and groundwater of the desert and southeastern area, and collected some other evidences from 14C dating, fossils and archeology. According to chemical analysis, we discuss the difference spatial character of ion chemistry and environmental isotope in lakes and groundwater of the desert and adjacent. Contrasting with ion chemistry and isotope results in other arid area, we argue origin of groundwater and lakes in the desert area, and get a preliminary understanding of desert lakes’ evolution during Holocene. Some main conclusions were drawn as follows: 1. It has a obvious difference in hydrophysical parameters between lakes and groundwater in the desert and margin. 2. The results of ion analysis show that Na+ and Cl- are dominant in most lakes of the desert. Meanwhile, Na+ 、Cl- and HCO3- are dominant in groundwater of the desert and adjacent, and alsoMg2+、Ca2+、and NO3- have more percentage than in lakes. 3. Owing to different solubilities, the conten of main ions in water varies with the content of TDS. Whereas the content of TDS is over 100 g/L, the content of SO42-、HCO3-、Mg2+and Ca2+ in lakes descend. 4. The result of isotope analyzing indicate the lakes and groundwater in southeast desert have a similar vaporing trend with the groundwater in the southeast margin of the desert. It imply there would have some kind of contact between groundwater in margin and lakes of southeast desert. 5. Contrasting with isotope results of groundwater in other arid area, it show that the groundwater in the desert and Yabulai area should be phreatic water which have a low water table. Therefore, we conclude that the groundwater in southeast part of the desert and southern margin mainly are recharged by precipitation of local abundant rainfall and groundwater of low mountain of southern area. 6. And all of these evidences, which are different from salinity, the content of CO32- and geological data, show that the bigger northern lake group and southeastern lake group in the desert have different groundwater replenishing system because a fold belt lie between of the two group lakes and obstruct them in landform. and HCO3- 7. The 14C dating results of fossil and lacustrine deposits show that there maybe have a wider range of shoreline during early and middle Holocene than today. 8. By the discovery and study of some pieces of pottery and fine stoneware, we preliminary conclude that there maybe have some certain amount of early human activities in the Badain Jaran Desert.

东北二龙湾玛珥湖32ka以来沉积序列的粒度组成特征及其古气候意义

Longgang maar area in Northern China is a sensitive region to the change of Asian summer monsoon, and also an important area to understand the dynamic mechanism of global paleoclimate and paleoenvironment changes. The grain-size and major element analyses have been carried out on the samples of the core from Erlongwan maar for reconstruction of high –resolution paleoenvironment change in Northeast China. Subsampling was done by 1cm interval for the upper 19.39m. Connecting multi-proxies (including,dry density, total organic carbon, etc.), we have acquired the following conclusions: 1、 the coarse fraction in grain size reflects the intensity of surface flow, and thus the intensity of monsoon rainfall in the region. 2、 the 19.39-m-long sediment covering the past 33ka, can be divided into 3 periods: The last glacial stage (33-18.5ka B.P.)：summer monsoon rainfall was low, temperature was minimum and climatic deteriorated. The last deglaciation (18.5-10 ka B.P.): temperature rose and surface water inflow increased. But it experienced a period, a Younger Dryas-like climatic deterioration. Holocene(10-0 ka B.P.)：summer monsoon rainfall reached maxima and varied at century scale and major millennial scale. 3、 the climatic variability in the whole Holocene is positively correlated with Atlantic ice-rafting events and there is an influence of sunspot activity in the late Holocene