New Nuclear SNP Markers Unravel the Genetic Structure and Effective Population Size of Albacore Tuna (Thunnus alalunga)

In the present study we have investigated the population genetic structure of albacore (Thunnus alalunga, Bonnaterre 1788) and assessed the loss of genetic diversity, likely due to overfishing, of albacore population in the North Atlantic Ocean. For this purpose, 1,331 individuals from 26 worldwide locations were analyzed by genotyping 75 novel nuclear SNPs. Our results indicated the existence of four genetically homogeneous populations delimited within the Mediterranean Sea, the Atlantic Ocean, the Indian Ocean and the Pacific Ocean. Current definition of stocks allows the sustainable management of albacore since no stock includes more than one genetic entity. In addition, short-and long-term effective population sizes were estimated for the North Atlantic Ocean albacore population, and results showed no historical decline for this population. Therefore, the genetic diversity and, consequently, the adaptive potential of this population have not been significantly affected by overfishing.

Diversidad taxonómica y funcional de invertebrados acuáticos en la Península Ibérica: patrones de distribución espacial

[ES] Las estructuras de las comunidades de agua dulce pueden variar bajo diferentes gradientes de origen natural y antropogénico. En nuestro trabajo testamos la relación entre variables geográficas ambientales y la diversidad, tanto taxonómica como funcional, de macroinvertebrados acuáticos, con la idea de poder definir patrones de distribución espacial a lo largo de los sistemas fluviales de la Península Ibérica. La altitud del punto de muestreo, el tamaño de la cuenca, los usos del suelo, la pluviometría y la geología de las cuencas aguas arriba de los puntos de muestreo fueron usadas como variables predictoras. Encontramos que el grado de cobertura urbana afectaba negativamente a la diversidad taxonómica, reduciendo así mismo la diversidad funcional. Sin embargo, nuestros resultados indicaron un efecto positivo en la diversidad bajo el efecto perturbador de las coberturas agrícolas. A su vez, encontramos una correlación entre la altitud y la cobertura de áreas urbanizadas y agrícolas en la cuenca. La geología de la cuenca tenía una mínima repercusión en las estructuras de las comunidades. En general, nuestros resultados sugieren que la diversidad de macroinvertebrados responde con mayor fuerza a las presiones antrópicas que a los gradientes naturales.

Streptococcus pyogenes Pneumonia in Adults: Clinical Presentation and Molecular Characterization of Isolates 2006-2015

Introduction In the preantibiotic era Streptococcus pyogenes was a common cause of severe pneumonia but currently, except for postinfluenza complications, it is not considered a common cause of community-acquired pneumonia in adults. Aim and Material and Methods This study aimed to identify current clinical episodes of S. pyogenes pneumonia, its relationship with influenza virus circulation and the genotypes of the involved isolates during a decade in a Southern European region (Gipuzkoa, northern Spain). Molecular analysis of isolates included emm, multilocus-sequence typing, and superantigen profile determination. Results Forty episodes were detected (annual incidence 1.1 x 100,000 inhabitants, range 0.29-2.29). Thirty-seven episodes were community-acquired, 21 involved an invasive infection and 10 developed STSS. The associated mortality rate was 20%, with half of the patients dying within 24 hours after admission. Influenza coinfection was confirmed in four patients and suspected in another. The 52.5% of episodes occurred outside the influenza seasonal epidemic. The 67.5% of affected persons were elderly individuals and adults with severe comorbidities, although 13 patients had no comorbidities, 2 of them had a fatal outcome. Eleven clones were identified, the most prevalent being emm1/ST28 (43.6%) causing the most severe cases. Conclusions S. pyogenes pneumonia had a continuous presence frequently unrelated to influenza infection, being rapidly fatal even in previously healthy individuals.