NOAA/MLML Radiometric Data Acquisition and Processing

This report is a detailed description of data processing of NOAA/MLML spectroradiometry data. It introduces the MLML_DBASE programs, describes the assembly of diverse data fues, and describes general algorithms and how individual routines are used. Definitions of data structures are presented in Appendices. [PDF contains 48 pages]

Oceanographic, meteorological, satellite and aircraft observations for project Little Window 2: May 1971

ENGLISH: In May 1971, a joint united states - Mexican experiment, Project Little Window 2, (LW-2) involving data collected by satellite, aircraft and ship sensors was made in the southern part of the Gulf of California. LW-2 was planned as an improved and enlarged version of LW-l (conducted the previous year; Stevenson and Miller, 1971) with field work scheduled to be made within a 200 by 200 km square region in the Gulf of California. The purposes of the new field study were to determine through coordinated measurements from ships, aircraft and satellites, the utility of weather satellites to measure surface temperature features of the ocean from space and specifically to evaluate the high resolution infrared sensors aboard N~ 1, ITOS 1 and NIMBUS 4 and to estimate the magnitude of the atmospheric correction factors needed to bring the data from the spacecraft sensors into agreement with surface measurements. Due to technical problems during LW-2, however, useful data could not be obtained from ITOS 1 and NIMBUS 4 so satellite information from only NOAA-1 was available for comparison. In addition, a new purpose was added, i.e., to determine the feasibility of using an Automatic picture Transmission (APT) receiver on shore and at sea to obtain good quality infrared data for the local region. SPANISH: En mayo 1971, los Estados Unidos y México realizaron un experimento en conjunto, Proyecto Little Window 2 (LW-2), en el que se incluyen datos obtenidos mediante captadores de satélites, aviones y barcos en la parte meridional del Golfo de California. Se planeó LW-2 para mejorar y ampliar el proyecto de LW-l (conducido el año anterior; Stevenson y Miller, 1971), realizándose el trabajo experimental en una región de 200 por 200 km cuadrados, en el Golfo de California. El objeto de este nuevo estudio experimental fue determinar mediante reconocimientos coordinados de barcos, aviones y satélites la conveniencia de los satélites meteorológicos para averiguar las características de la temperatura superficial del océano desde el espacio, y especialmente, evaluar los captadores infrarrojos de alta resolución a bordo de NOAA 1, ITOS 1 Y NIMBUS 4, y estimar la magnitud de los factores de corrección atmosféricos necesarios para corregir los datos de los captadores espaciales para que concuerden con los registros de la superficie. Sin embargo, debido a problemas técnicos durante LW-2, no fue posible obtener datos adecuados de ITOS 1 y NIMBUS 4, as1 que solo se pudo disponer de la información de NOAA 1 para hacer las comparaciones. Además se quiso determinar la posibilidad de usar un receptor de Trasmisión Automático de Fotografias (APT) en el mar para obtener datos infarojos de buena calidad en la región local. (PDF contains 525 pages.)

Social structure and underwater behavior of harbor seals in southern Monterey Bay, California

To understand harbor seal social and mating strategies, I examined site fidelity, seasonal abundance and distribution, herd integrity, and underwater behavior of individual harbor seals in southern Monterey Bay. Individual harbor seals (n = 444) were identified by natural markings and represented greater than 80% of an estimated 520 seals within this community. Year to year fidelity of individual harbor seals to southern Monterey Bay coastline was 84% (n = 388), and long-term associations (>2 yrs) among individuals were common (>40%). Consistent with these long-term associations, harbor seals were highly social underwater throughout the year. Underwater social behavior included three primary types: (1) visual and acoustic displays, such as vocalizing, surface splashing, and bubble-blowing; (2) playful or agonistic social behavior such as rolling, mounting, attending, and biting; and (3) signal gestures such as head-thrusting, fore-flipper scratch~ng, and growling. Frequency of these types of behavior was related to seal age, gender, season, and resource availability. Underwater behavior had a variety of functions, including promotion of learning and social development, reduction of aggression and preservation of social bonds by maintaining social hierarchy, and facilitation of mate selection during breeding season. Social behavior among adult males was significantly correlated with vocalization characteristics (r = 0.99, X2 = 37.7, p = 0.00087), indicating that seals may assess their competition based on underwater vocalization displays and adopt individual strategies for attracting females during breeding season based on social status. Individual mating strategies may include defending underwater territories, using scramble tactics, and developing social alliances. (PDF contains 105 pages)

Report on the analysis of salmon scale samples returned by anglers on the Rivers Ribble and Hodder

Fisheries technical staff from the North West Central Area of the National Rivers Authority (NRA) currently provide a service for the ageing of salmon scales from fish caught by anglers on the Rivers Ribble and Hodder in order to gather information on the biological characteristics of the salmon population on the River Ribble system in terms of weight, freshwater age and sea age. At the beginning of each fishing season, scale envelopes are distributed by the NRA to angling clubs and some individual anglers. Scales taken from salmon caught on the rivers are returned to the NRA Central Area Office by the anglers, or more often, by NRA bailiffs. The age of each fish caught is then determined by the identification and counting of annuli for both the river and sea zones on the scale. Information is provided by the angler on the scale packet concerning the length and weight of the fish caught, and the date, location and method of capture. Both this information and the age of the fish is recorded on a database. These data can be used to investigate the distribution, and exploitation patterns of the different age classes of the salmon stock within the river system. This report is principally concerned with the scale samples received in 1994, although comparison is also made with samples from 1993 and 1992. References to data will all relate to that received in 1994 unless an alternate year is stated.

Population structure of pink salmon (Oncorhynchus gorbuscha) in British Columbia and Washington, determined with microsatellites

Population structure of pink salmon (Oncorhynchus gorbuscha) from British Columbia and Washington was examined with a survey of microsatellite variation to describe the distribution of genetic variation. Variation at 16 microsatellite loci was surveyed for approximately 46,500 pink salmon sampled from 146 locations in the odd-year broodline and from 116 locations in the even-year broodline. An index of genetic differentiation, FST, over all populations and loci in the odd-year broodline was 0.005, with individual locus values ranging from 0.002 to 0.025. Population differentiation was less in the even-year broodline, with a FST value of 0.002 over all loci, and with individual locus values ranging from 0.001 to 0.005. Greater genetic diversity was observed in the odd-year broodline. Differentiation in pink salmon allele frequencies between broodlines was approximately 5.5 times greater than regional differentiation within broodlines. A regional structuring of populations was the general pattern observed, and a greater regional structure in the odd-year broodline than in the even-year broodline. The geographic distribution of microsatellite variation in populations of pink salmon likely ref lects a distribution of broodlines from separate refuges after the last glaciation period.

Catch rates and demographics of loggerhead sea turtles (Caretta caretta) captured from the Charleston, South Carolina, shipping channel during the period of mandatory use of turtle excluder devices (TEDs)

Trawling was conducted in the Charleston, South Carolina, shipping channel between May and August during 2004–07 to evaluate loggerhead sea turtle (Caretta caretta) catch rates and demographic distributions. Two hundred and twenty individual loggerheads were captured in 432 trawling events during eight sampling periods lasting 2–10 days each. Catch was analyzed by using a generalized linear model. Data were fitted to a negative binomial distribution with the log of standardized sampling effort (i.e., an hour of sampling with a net head rope length standardized to 30.5 m) for each event treated as an offset term. Among 21 variables, factors, and interactions, five terms were significant in the final model, which accounted for 45% of model deviance. Highly significant differences in catch were noted among sampling periods and sampling locations within the channel, with greatest catch furthest seaward consistent with historical observations. Loggerhead sea turtle catch rates in 2004–07 were greater than in 1991–92 when mandatory use of turtle excluder devices was beginning to be phased in. Concurrent with increased catch rates, loggerheads captured in 2004–07 were larger than in 1991–92. Eighty-five percent of loggerheads captured were ≤75.0 cm straight-line carapace length (nuchal notch to tip of carapace) and there was a 3.9:1 female-to-male bias, consistent with limited data for this location two decades earlier. Only juvenile loggerheads ≤75.0 cm possessed haplotypes other than CC-A01 or CC-A02 that dominate in the region. Six rare and one un-described haplotype were predominantly found in June 2004.

Effect of combined thyroxine and cortisol treatment on hatching of eggs, post-embryonic growth and survival of larvae of Heteropneustes fossilis

In order to record the effects of thyroxine and cortisol (individual/combined) on hatching, post-embryonic growth and survival of larvae of Heteropneustes fossilis, newly fertilized eggs were given bath immersion treatments of L-thyroxine (T sub(4); 0.05 mg/l), cortisol (0.50 mg/l) and T sub(4)+ cortisol (0.05 mg/l+0.50 mg/l) for 15 days. Hatching of eggs, growth and survival of the larvae improved significantly (P<0.001) in the hormone treated groups as compared to those of control. The frequency of deformities was reduced in the combined hormone treatment group. The present observations suggest that the advanced digestive function probably induced by T sub(4)+cortisol treatment might have resulted in improvement in food utilization during the critical phases of first feeding and promoted vital developmental processes resulting in uniform growth, decreased mortality, better survival and transformation of larvae to juveniles. This combined hormone therapy appears to have practical utility in fish hatchery practice for better success in larval rearing.

Evaluation of external anchor tags for estimation of growth and survival in tilapia (Oreochromis shiranus chilwae Trewavas)

The effects of tagging with Roy FD-68B T-bar anchor tags on estimates of growth in Tilapia (Oreochromis shiranus chilwae) were investigated in a pond and in a field experiment. In the pond experiment, mean length increments of tagged and marked fish were compared. In the field experiment growth of tagged and "untouched" individual wild fish were compared by measuring scale circuli spacing (Circ.), which is correlated to instantaneous growth rate. Length increments of tagged and untagged/marked fish were not significantly different in either experiment. In the pond experiment, the total mortality rate in the small tagged fish was significantly higher than in the marked fish. The recoveries of tagged fish in the pond experiment increased with fish size. Recoveries exceeded 80% at lengths over 13 cm TL. The ratios of tagged to marked recoveries were 1.02 and 0.74 for large and small fish respectively. The study shows that tagging of Tilapia with Roy anchor tags does not in general alter the growth rates of the fish.

Die Fruchtbarkeit von Dorschen in der Ostsee - was verrät sie uns?

About 1500 ovaries of Baltic cod were prepared for estimating the potential absolute and relative individual fecundity. The female cod were sampled in the Belt Sea, ICES Subdivision (SD) 22, in the Arkona Sea, SD 24, and in the Bornholm Sea, SD 25. The investigations started in1992 and until 1999 cruises were carried out to catch female cod in the different sub-divisions every year. The results shows that the potential fecundity is not a stable biological parameter, and that significant changes are possible within a relative short period. It was demonstrated that the developments of the potential individual fecundity of the western (Gadus morhua morhua) and eastern Baltic cod stocks (Gadus morhua callarias) were different. In contrast to the stable individual fecundity of the western cod the absolute and relative fecundity of the eastern repeat spawners increased from 1993 to 1999, significantly. The reason of this development seems to be the dramatic decrease of the eastern cod stock and the more successful reproduction of individuals that produce oocytes with a lower dry weight in combination with a higher relative fecundity.

Fischbestände der Ostsee, ihre Entwicklung seit 1970 und Schlussfolgerungen für ihre fischereiliche Nutzung - Teil 2: Hering

The herring of the Baltic Sea shows a complicated population structure. Comparable to herring in other areas it can also be discriminated as spring and autumn spawning herring. Autumn spawning herring has been nearly vanished since the late 1960’s. Baltic Sea spring spawning herring show a broad variety as far as morphometric and other biological characteristics are concerned. It seems not very likely that all those differences are genetically based. The spawning sites of populations are, however, often clearly separated and such groups of herring are in most cases characterized by distinct differences in individual growth. Therefore for assessment purposes it is necessary to distinguish between as small as possible units in order to not endanger smaller populations to become extinct by overexploitation. On the other hand migrations and mixing of herring of different origin especially during the summer feeding period result in extreme difficulties of the discrimination of small units. For this reason only three herring assess ment units have been identified for the central and the northern Baltic Sea: herring in Sub-divisions 25–32+32, herring in Sub-division 30 and herring in Sub-division31. The spring spawning herring of the western Baltic Sea has been combined with spring spawning herring in Division IIIa. Only the herring stock in Sub-division 30 shows a positive development in the past. The largest assessment unit in Sub-divisions 25–29+32 decreased continuously during the whole period 1974–1998. The western Baltic Spring spawning herring stock decreased from 1990 to 1996. There is an ongoing debate on scientific level whether the combination of small populations into large assessment units like the one in S-D’s 25–29&32 might include the danger of the extinction of small compartments of the unit. On the other hand the practice by the International Baltic Sea Fishery Commission of managing the Baltic Sea herring fisheries by dividing a yearly Total Allowable Catch for the whole area among fishery zones without taking care of any biological structure and any individual stock development is totally against the idea of sustainability of fisheries.

Annual report 1988

The document gives an account of the activities carried out during the year 1988 by the Lake Kariba Fisheries Research Institute and includes individual reports of the various projects conducted during the year. They include: the Zambia/Zimbabwe Lake Kariba Fisheries Research and Development Project; a comparative study of genetic growth determinance of Limnothrissa miodon; a comparative study of consumption rates and preference for some species of aquatic macrophytes by Tilapia rendalli; an evaluation of inshore stocks, and external variables causing variation in composition abundance and distribution; Willards cage-culture pilot project; and, aspects of the ecology of the phytobenthic communities in Lake Kariba - PhD thesis.

Parameterizing probabilities for estimating age-composition distributions for mixture models

When estimating parameters that constitute a discrete probability distribution {pj}, it is difficult to determine how constraints should be made to guarantee that the estimated parameters { pˆj} constitute a probability distribution (i.e., pˆj>0, Σ pˆj =1). For age distributions estimated from mixtures of length-at-age distributions, the EM (expectationmaximization) algorithm (Hasselblad, 1966; Hoenig and Heisey, 1987; Kimura and Chikuni, 1987), restricted least squares (Clark, 1981), and weak quasisolutions (Troynikov, 2004) have all been used. Each of these methods appears to guarantee that the estimated distribution will be a true probability distribution with all categories greater than or equal to zero and with individual probabilities that sum to one. In addition, all these methods appear to provide a theoretical basis for solutions that will be either maximum-likelihood estimates or at least convergent to a probability distribut

New insights into the diets of harbor seals (Phoca vitulina) in the Salish Sea revealed by analysis of fatty acid signatures

Harbor seals (Phoca fvitulina) are an abundant predator along the west coast of North America, and there is considerable interest in their diet composition, especially in regard to predation on valued fish stocks. Available informationon harbor seal diets, primarily derived from scat analysis, suggests that adult salmon (Oncorhynchus spp.), Pacific Herring (Clupea pallasii), and gadids predominate. Because diet assessments based on scat analysis may be biased, we investigated diet composition through quantitative analysis of fatty acid signatures. Blubber samples from 49 harbor seals captured in western North America from haul-outs within the area of the San Juan Islands and southern Strait of Georgia in the Salish Sea were analyzed for fatty acid composition, along with 269 fish and squid specimens representing 27 potential prey classes. Diet estimates varied spatially, demographically, and among individual harbor seals. Findings confirmed the prevalence of previously identified prey species in harbor seal diets, but other species also contributed significantly. In particular, Black (Sebastes melanops) and Yellowtail (S. flavidus) Rockfish were estimated to compose up to 50% of some individual seal diets. Specialization and high predation rates on Black and Yellowtail Rockfish by a subset of harbor seals may play a role in the population dynamics of these regional rockfish stocks that is greater than previously realized.

Análise dos efeitos da introduçāo de medidas de gestāo na pescaria de camarāo do Banco de Sofala

Biological effects of management measures introduced in the shrimp fishery from 1985 to 1990 are analysed as well as the results from simulation of different closed seasons. Observed changes in recruitment, total catch, biomass and average individual weight during 1985 to 1990 for Penaeus indicus and Hetapenaeus Monoceros are also analysed. Further studies on a stock-recruitment relationship are important due to decline of recruitment levels in this period. A three-month closed season starting in January is recommended, without increases in the monthly fishing effort. The TAC shall be fixed according to the recruitment level each year.