6 resultados para cross-species amplification

em Aquatic Commons


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The identification of sea bass (Centropristis) larvae to species is difficult because of similar morphological characters, spawning times, and overlapping species ranges. Black sea bass (Centropristis striata) is an important fishery species and is currently considered to be overfished south of Cape Hatteras, North Carolina. We describe methods for identifying three species of sea bass larvae using polymerase chain reaction (PCR) and restriction fragment length polymorphism (RFLP) assays based on species-specific amplification of rDNA internal transcribed spacer regions. The assays were tested against DNA of ten other co-occurring reef fish species to ensure the assay's specificity. Centropristis larvae were collected on three cruises during cross-shelf transects and were used to validate the assays. Seventy-six Centropristis larva were assayed and 69 (91%) were identified successfully. DNA was not amplified from 5% of the larvae and identification was inconclusive for 3% of the larvae. Those assays can be used to identify sea bass eggs and larvae and will help to assess spawning locations, spawning times, and larval dispersal.

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The fishery for crayfish is of considerable importance in the maritime region of the Cross River State, Nigeria, where it forms an important occupation of a host of fishermen. Crayfish landings from this State contributed 11% to the national marine fish landings within the period 1980 to 1984 and also in the same period the volume of crayfish alone formed 26% of the marine fish landings within the State. The species exploited as crayfish include Palaemon hastatus; Hippolysmata hastatoides, and Macrobrachium sp; mixed with the larval, and juveniles of pink shrimp Panaeus dourarum. They are generally small in size ranging from 7 cm (maximum) to 2.5 cm. Crayfish are caught all year round along the Niger Delta, but particularly along the river estuaries and littoral waters of the Cross River State with the highest production occurring in March to May. Crayfish are usually smoked, and occasionally sun-dried, and they form an indispensable food item in the diet of the people of the entire southern States in particular and Nigeria in general. It appears that crayfish landings could be substantially increased without depleting the stock, if a proper exploratory survey is undertaken of the Niger delta, and the Cross River estuaries to chart potentially rich grounds of this resource

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Samples of Pseudotolithus elongatus, Chrysichthys nigrodigitatus and Cynoglosus goreensis obtained from the Cross River Estuary (which is most probably the largest estuary water system along the coast of West Africa) between January 1980 and May 1981 were evaluated on basis of population dynamic analytical method postulated by Pauly (1980) for tropical fish stocks. Growth parameters were obtained for the fish species. Wherever possible, these results were compared to those obtained by Longhurst (1964d) and LeGuen (1971) in other West African waters. On the whole, results obtained in this study tend to indicate that the growth of the croaker, bagrid catfish and the sole in the Cross River Estuary is allometric, the third and fourth year-classes of P. elongatus the second and third class-year of C. nigrodigitatus and the fourth, fifth and sixth year classes of C. goreensis dominated in the age distribution of these fish species

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The Nigerian pelagic fishery contributes about two-thirds of the total marine fishery resources of the country. The main components of this fishery are the clupeid (Ethmalosa, and Sardinella spp) and the scombroid (jacks, barracuda and tuna) fisheries. In 1979 to 1983, fish production from the national inshore and brackishwater zones was 1,702,685 tonnes. Bonga (Ethmalosa fimbriata) which dominates the pelagic fishery in the Cross River State of Nigeria, contributed about 158,612 tonnes (i.e. 9.3%) of this national marine fish catch. Although bonga is caught along the entire Nigerian coast, a significant fishery exists mostly in the wider estuary of the Cross River State, which borders on the Cameroon Republic. In the Cross River State, and within the period, bonga contributed 24% to the marine fish landings. Bonga is supported by a single species (E. fimbriata). The species forms an important fishery all the year-round in the open sea off these estuaries, whenever the canoes venture to sea, but these open sea fisheries are affected by whether conditions. The best, and most suitable gear for bonga are the gill nets, cast nets, boat seines, and shore seines. Dried and smoked bonga are a common market commodity in the southern parts of the country generally, but particularly in the Cross State where it is a readily available and acceptable food item

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A literature review of 50 titles including nearly all relevant publications ensures adequate basis on the present level of knowledge. The proposal includes (a) the determination of the biozoenosis and selected environmental factors, and (b) of fishery and stock data of the main fish and shellfish species. The ecological research studies physical and chemical variables of the estuarine waters (flow velocity and direction, water temperature, conductivity, pH, dissolved oxygen, salinity, nutrients such as ammonium, nitrite, phosphate, silicate, pollutants such as hybrocarbons, pesticides and heavy metals, biochemical oxygen demand, chemical oxygen demand), plankton (bacterio-phyto-and zooplankton), benthos, sediment. The fishery biological and fishery investigations include: number of villages and fishermen, number of boats and gears by type, length and weight data of the main fishery objects with concentration on the shrimps, species and numbers of fish parasites. The ecological variables were monitored at fixed stations on sections in the Cross-River Estuary, Calabar and Great Kwara Rivers two times per month during spring and neap tides. The fishery biological and fishery variables were obtained during spring and neap tide too. For the determination of the detailed methodology the ecological and fishery part of the progeamme should be started with frame surveys based on a larger number of stations. These frame surveys should be repeated from time to time. Both parts of the programme are based on three years duration. It seems already appropriate to continue the work with selected representative stations, villages and variables in form of a long-term data chain

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The variability in the supply of pink shrimp (Farfantepenaeus duorarum) postlarvae and the transport mechanisms of planktonic stages were investigated with field data and simulations of transport. Postlarvae entering the nursery grounds of Florida Bay were collected for three consecutive years at channels that connect the Bay with the Gulf of Mexico, and in channels of the Middle Florida Keys that connect the southeastern margin of the Bay with the Atlantic Ocean. The influx of postlarvae in the Middle Florida Keys was low in magnitude and varied seasonally and among years. In contrast, the greater postlarval influx occurred at the northwestern border of the Bay, where there was a strong seasonal pattern with peaks in influx from July through September each year. Planktonic stages need to travel up to 150 km eastward between spawning grounds (northeast of Dry Tortugas) and nursery grounds (western Florida Bay) in about 30 days, the estimated time of planktonic development for this species. A Lagrangian trajectory model was developed to estimate the drift of planktonic stages across the SW Florida shelf. The model simulated the maximal distance traveled by planktonic stages under various assumptions of behavior. Simulation results indicated that larvae traveling with the instantaneous current and exhibiting a diel behavior travel up to 65 km and 75% of the larvae travel only 30 km. However, the eastward distance traveled increased substantially when a larval response to tides was added to the behavioral variable (distance increased to 200 km and 85% of larvae traveled 150 km). The question is, when during larval development, and where on the shallow SW Florida shelf, does the tidal response become incorporated into the behavior of pink shrimp.