Cruise Report: Summer 2008 Ecological Assessment of Stellwagen Bank National Marine Sanctuary NOAA Ship NANCY FOSTER NF-08-09-CCEHBR (June 14-June 21, 2008)

Summary: This cruise report is a summary of a field survey conducted within the Stellwagen Bank National Marine Sanctuary (SBNMS), located between Cape Cod and Cape Ann at the mouth of Massachusetts Bay. The survey was conducted June 14 – June 21, 2008 on NOAA Ship NANCY FOSTER Cruise NF-08-09-CCEHBR. Multiple indicators of ecological condition and human dimensions were sampled synoptically at each of 30 stations throughout SBNMS using a random probabilistic sampling design. Samples were collected for the analysis of benthic community structure and composition; concentrations of chemical contaminants (metals, pesticides, PAHs, PCBs, PBDEs) in sediments and target demersal biota; nutrient and chlorophyll levels in the water column; and other basic habitat characteristics such as depth, salinity, temperature, dissolved oxygen, turbidity, pH, sediment grain size, and organic carbon content. In addition to the fish samples that were collected for analysis of chemical contaminants relative to human-health consumption limits, other human-dimension indicators were sampled as well including presence or absence of fishing gear, vessels, surface trash, marine mammals, and noxious sediment odors. The overall purpose of the survey was to collect data to assess the status of ecosystem condition and potential stressor impacts throughout SBNMS, based on these various indicators and corresponding management thresholds, and to provide this information as a baseline for determining how such conditions may be changing with time. While sample analysis is still ongoing a few preliminary results and observations are reported here. A final report will be completed once all data have been processed. The results are anticipated to be of value in supporting goals of the SBNMS and National Marine Sanctuary Program aimed at the characterization, protection, and management of sanctuary resources (pursuant to the National Marine Sanctuary Reauthorization Act) as well as a new priority of NCCOS and NOAA to apply Ecosystem Based approaches to the Management of coastal resources (EBM) through Integrated Ecosystem Assessments (IEAs) conducted in various coastal regions of the U.S. including the Northeast Atlantic continental shelf. This was a multi-disciplinary partnership effort made possible by scientists from the following organizations:  NOAA, National Ocean Service (NOS), National Centers for Coastal Ocean Science (NCCOS), Center for Coastal Environmental Health and Biomolecular Research (CCEHBR), Charleston, SC.  U.S. Environmental Protection Agency (EPA), National Health and Environmental Effects Research Laboratory (NHEERL), Atlantic Ecology Division (GED), Narragansett, RI.  U.S. Environmental Protection Agency (EPA), National Health and Environmental Effects Research Laboratory (NHEERL), Gulf Ecology Division (GED), Gulf Breeze, FL.  U.S. Geological Survey (USGS), National Wetlands Research Center, Gulf Breeze Project Office, Gulf Breeze, FL.  NOAA, Office of Marine and Aviation Operations (OMAO), NOAA ship Nancy Foster. (31pp) (PDF contains 58 pages)

The distribution of ctenophora in the Patuxent estuary during the summer of 1958

Investigation of Ctenophores in the Chesapeake Bay area, includes some aspects of their life history, growth, reproduction, feeding and food habits, abundance and distribution. the purpose of the entire project is to supplement and add to the biological knowledge and understanding of ctenophores as a group and of the several individual species found int he area to be studied. Includes possible factors involved and implications also being looked at. (PDF contains 33 pages)

The Summer Flounder, Scup, and Black Sea Bass Fishery of the Middle Atlantic Bight and Southern New England Waters

Summer flounder, Paralichthys dentatus, scup, Stenotomus chrysops, and black sea bass, Centropristis striata, cooccur within the Middle Atlantic Bight and off southern New England and are important components of commercial and recreational fisheries. The commercial otter trawl fishery for these species is primarily a winter fishery, whereas the recreational fishery takes place between late spring and autumn. The otter trawl fishery generally targets summer flounder, and less frequently scup, while black sea bass occurs as bycatch. Trips in which all three species were present yielded highest aggregate landings per unit of effort (LPUE) levels and occurred more often than trips landing only one or two species. More than 50% of the trips in the trawl fishery landed at least two of the three species. In contrast, greater than 75% of the recreational landings of each species occurred as a result of trips landing only one species. Differences in the fisheries resulted from the interactions of seasonal changes in species distributions and gear selectivity. (PDF file contains 18 pages.)

Environmental effects of drought and abstractions of River Wharfe fisheries, summer 1997

This investigation was carried out to provide information on fish stocks and angling activity during 1997 in relation to the drought and, in particular, flows as influenced by Time Limited Licences. These abstractions will be for review in 1999. This report extends and updates the data presented for 1996. Fish population surveys (including eels) were undertaken on the main river and selected tributaries. Angler caught brown trout were examined, angler catch data have been reviewed, and observations by Environment Agency fisheries staff collated. It appeared that in River Wharfe both the fish populations and individual fish appeared to be in good condition and limited changes had occurred since the 1996 survey.

Environmental effects of drought and abstractions of River Ouse fisheries, summer 1997

This survey was the second year of a three year study to examine fish populations in relation to low flows, drought and abstraction in the River Ouse. To fully evaluate the possible effects on fisheries the study set out to encompass fish population surveys from fry to adult stock, analysis of angler catch data, reports from anglers and river reports from Environment Agency Fisheries staff.

River Wharfe fisheries monitoring report - summer 2001

This is a report on monitoring carried out in 2001 specifically in relation to effects of flows and abstractions on fisheries in the River Wharfe. The monitoring is a continuation of that started in relation to the Time Limited Abstraction Licences in 1996 and required by the new licences granted in 1999. It gives information regarding fish populations at a range of sites in the River Wharfe and also two tributary sites. It also gives recommendations for future investigations in relation to both Time Limited Licences and general broader issues.

River Ure fisheries monitoring report - summer 2001

Fish population studies in the River Ure have continued for their sixth successive year in order to examine and evaluate the effects of low flows and drought conditions particularly in relation to the Time Limited Licence abstraction at Kilgram Bridge, currently granted to Yorkshire Water Services. This monitoring report looks at the different fish populations and growth rates in the main river and tributaries, comparing the results to previous years. The report also looks at the general findings from angling, the medium term drought impacts, the abstraction impacts, and recommendations for investigations for 2002.

Larval abundance of summer flounder (Paralichthys dentatus) as a measure of recruitment and stock status

Summer flounder (Paralichthys dentatus) is one of the most economically and ecologically important estuarine-dependent species in the northeastern United States. The status of the population is currently a topic of controversy. Our goal was to assess the potential of using larval abundance at ingress as another fishery independent measure of spawning stock biomass or recruitment. Weekly long-term ichthyoplankton time series were analyzed from Little Egg Inlet, New Jersey (1989–2006) and Beaufort Inlet, North Carolina (1986–2004). Mean size-at-ingress and stage were similar between sites, whereas timing of ingress and abundance at ingress were not similar. Ingress primarily occurred during the fall at Little Egg Inlet and the winter at Beaufort Inlet. These findings agree with those from earlier studies in which at least two stocks (one north and one south of Cape Hatteras) were identified with different spawning periods. Larval abundance at Little Egg Inlet has increased since the late 1990s and most individuals now enter the estuary earlier during the season of ingress. Abundance at Little Egg Inlet was correlated with an increase in spawning stock biomass, presumably because spawning by larger, more abundant fish during the late 1990s and early 2000s provided increased larval supply, at least in some years. Larval abundance at ingress at Beaufort Inlet was not correlated with spawning stock biomass or with larval abundance at ingress at Little Egg Inlet, further supporting the hypothesis of at least two stocks. Larval abundance at Little Egg Inlet could be used as a fishery-independent index of spawning stock size north of Cape Hatteras in future stock assessments. Larval occurrence at Beaufort Inlet may provide information on the abundance of the stock south of Cape Hatteras, but additional stock assessment work is required.

Use of non-natal estuaries by migratory striped bass (Morone saxatilis) in summer

For most migratory fish, little is known about the location and size of foraging areas or how long individuals remain in foraging areas, even though these attributes may affect their growth, survival, and impact on local prey. We tested whether striped bass (Morone saxatilis Walbaum), found in Massachusetts in summer, were migratory, how long they stayed in non-natal estuaries, whether observed spatial patterns differed from random model predictions, whether fish returned to the same area across multiple years, and whether fishing effort could explain recapture patterns. Anchor tags were attached to striped bass that were caught and released in Massachusetts in 1999 and 2000, and recaptured between 1999 and 2007. In fall, tagged striped bass were caught south of where they were released in summer, confirming that fish were coastal migrants. In the first summer, 77% and 100% of the recaptured fish in the Great Marsh and along the Massachusetts coast, respectively, were caught in the same place where they were released. About two thirds of all fish recaptured near where they were released were caught 2–7 years after tagging. Our study shows that smaller (400–500 mm total length) striped bass migrate hundreds of kilometers along the Atlantic Ocean coast, cease their mobile lifestyle in summer when they use a relatively localized area for foraging (<20 km2), and return to these same foraging areas in subsequent ye

The trophic dynamics of summer flounder (Paralichthys dentatus) in Chesapeake Bay

Data on the trophic dynamics of fishes are needed for management of ecosystems such as Chesapeake Bay. Summer flounder (Paralichthys dentatus) are an abundant seasonal resident of the bay and have the potential to impact foodweb dynamics. Analyses of diet data for late juvenile and adult summer flounder collected from 2002−2006 in Chesapeake Bay were conducted to characterize the role of this flatfish in this estuary and to contribute to our understanding of summer flounder trophic dynamics throughout its range. Despite the diversity of prey, nearly half of the diet comprised mysid shrimp (Neomysis spp.) and bay anchovy (Anchoa mitchilli). Ontogenetic differences in diet and an increase in diet diversity with increasing fish size were documented. Temporal (inter- and intra-annual) changes were also detected, as well as trends in diet reflecting peaks in abundance and diversity of prey. The preponderance of fishes in the diet of summer flounder indicates that this species is an important piscivorous predator in Chesapeake Bay.

Abundance and distribution of California sea lions (Zalophus californianus) in central and northern California during 1998 and summer 1999

The abundance and distribution of California sea lions (Zalophus californianus) in central and northern California was studied to allow future evaluation of their impact on salmonids, the ecosystem, and f isheries. Abundance at-sea was estimated by using the strip transect method from a fixed-wing aircraft with a belly viewing port. Abundance on land was estimated from 126-mm-format aerial photographs of animals at haulouts between Point Conception and the California−Oregon border. The sum of these two estimates represented total abundance for central and northern California. Both types of survey were conducted in May−June 1998, September 1998, December 1998, and July 1999. A haulout survey was conducted in July 1998. The greatest number of sea lions occurred near Monterey Bay and San Francisco Bay for all surveys. Abundance was high in central and northern California in 1998 when warm water from the 1997−98 El Niño affected the region and was low in July 1999 when cold water La Niña conditions were prevalent. At-sea abundance estimates in central and northern California ranged from 12,232 to 40,161 animals, and haulout abundance was 13,559 to 36,576 animals. Total abundance of California sea lions in central and northern California was estimated as 64,916 in May−June 1998, 75,673 in September 1998, 56,775 in December 1998, and 25,791 in July 1999. The proportion of total abundance to animals hauled-out for the four complete surveys ranged from 1.77 to 2.13, and the mean of 1.89 was used to estimate a total abundance of 49,697 for July 1998. This multiplier may be applicable in the future to estimate total abundance of California sea lions off central and northern California if only the abundance of animals at haulout sites is known.

A Brief Interpretation of Summer Flounder, Paralichthys dentatus, Movements and Stock Structure with New Tagging Data on Juveniles

Summer flounder, Paralichthys dentatus, are managed as a single stock along the Atlantic coast from the U.S.– Canada border to the southern border of North Carolina. Justification of the single-stock approach is based on lack of genetic evidence for multiple stocks and the difficulty presented by managing the species from Cape Hatteras to the U.S.–Canada border. In this review, we present an interpretation of various morphometric, meristic, biochemical, and tagging studies, published and unpublished, that indicate the presence of two, or possibly three, distinct stocks in the management area. In addition, we have included new data from a tagging study that was conducted on juveniles from Virginia that aids in defining the stock(s) north of Cape Hatteras. Summer flounder, overfished for the past two decades, is recovering, and reconsideration of proposed stock structure could have direct implications for management policy decisions.

PICES Press, Vol. 18, No. 2, Summer 2010

•The 2010 Inter-sessional Science Board Meeting: A Note from the Science Board Chairman (pp. 1-3) •2010 Symposium on “Effects of Climate Change on Fish and Fisheries” (pp. 4-11) •2009 Mechanism of North Pacific Low Frequency Variability Workshop (pp. 12-14) •The Fourth China-Japan-Korea GLOBEC/IMBER Symposium (pp. 15-17, 23) •2010 Sendai Ocean Acidification Workshop (pp. 18-19, 31) •2010 Sendai Coupled Climate-to-Fish-to-Fishers Models Workshop (pp. 20-21) •2010 Sendai Salmon Workshop on Climate Change (pp. 22-23) •2010 Sendai Zooplankton Workshop (pp. 24-25, 28) •2010 Sendai Workshop on “Networking across Global Marine Hotspots” (pp. 26-28) •The Ocean, Salmon, Ecology and Forecasting in 2010 (pp. 29, 44) •The State of the Northeast Pacific during the Winter of 2009/2010 (pp. 30-31) •The State of the Western North Pacific in the Second Half of 2009 (pp. 32-33) •The Bering Sea: Current Status and Recent Events (pp. 34-35, 39) •PICES Seafood Safety Project: Guatemala Training Program (pp. 36-39) •The Pacific Ocean Boundary Ecosystem and Climate Study (POBEX) (pp. 40-43) •PICES Calendar (p. 44)

PICES Press, Vol. 19, No. 2, Summer 2011

•The 2011 Inter-sessional Science Board Meeting: A Note from Science Board Chairman (pp. 1-4) •Indicators for Status and Change within North Pacific Marine Ecosystems: A FUTURE Workshop (pp. 5-8) •PICES Calendar (p. 8) •2011 ESSAS Open Science Meeting (pp. 9-13) •The 5th Zooplankton Production Symposium (pp. 14-17) •Workshop on "Individual-Based Models of Zooplankton” (pp. 18-21) •New Book Release on the 100th Anniversary of the T/S Osharu Maru (p. 21) •Workshop on “Advances in Genomic and Molecular Studies of Zooplankton” (pp. 22-24) •Workshop on “Updates and Comparisons of Zooplankton Time Series” (pp. 25-27) •Workshop on “Impacts of Ocean Acidification on Zooplankton” (pp. 28-29) •Workshop on “Automated Visual Plankton Identification” (p. 30) •Professor Plum in the Dining Room with a Knife (p. 31) •PICES and ICES on the River Elbe (p. 32) •The State of the Western North Pacific in the Second Half of 2010 (pp. 33-34) •The Bering Sea: Current Status and Recent Events (pp. 35-37) •Northeast Pacific News (pp. 38-39) •PICES Advice on Marine Ecology at a Canadian Judicial Inquiry (p. 40)