A quantitative analysis of the phytoplankton of the Gulf of Panama III. General ecological conditions and the phytoplankton dynamics at 8°45'N, 79°23'W from November 1954 to May 1957

Bi-weekly phytoplankton samples were collected at 0, 10, and 20 m and enumerated by the Utermöhl sedimentation technique; 14C productivity measurements at 10 m, oblique zooplankton tows, and routine hydrographic observations were also made. Northerly winds induce upwelling during December-April, followed by a rainy season; a slight resurgence in upwelling may occur during July and/or August. Annual variations in upwelling intensity and rainfall occur. During upwelling, the upper 50 m, about 30 per cent of the total volume of the Gulf of Panama, is replaced with water 5 to 10 C colder than the more stratified, turbid and nutrient impoverished watermass present during the rainy season. The mean annual runoff accompanying an average annual precipitation of 2731 mm is estimated to equal a layer of fresh water 3.2 m thick. About 10 per cent of the phytoplankton phosphate and inorganic nitrogen requirements during the rainy season are accreted. (PDF contains 260 pages.)

The distribution, abundance, and ecology of larval tunas from the entrance to the Gulf of California

ENGLISH: This study is based on collections of larvae of Thunnus albacares, Euthynnus llneatus, and Auxis sp. obtained from surface and oblique net tows made during seven cruises, each along a comparable track in the entrance of the Gulf of California and each during a different month. Concomitant measurements of surface temperature, salinity, and zooplankton were made at each of the plankton stations. The catches of larval Auxis sp. were examined by analysis of variance techniques to determine which environmental features were associated with the spawning of this tuna as indicated by the distribution of larvae and to gain some insight into the behavior of the larvae themselves. The testing indicated that the spawning of Auxis sp. varied significantly among the different months of the cruises. The testing also indicated that if the larvae were capable of avoiding the sampling apparatus, this ability was not related to features associated with time of day such as light conditions. The analysis did not detect any change in the vertical distribution of the larvae among the months of the experiment. It was concluded that the larvae did not exhibit a diel vertical movement. The measurements of temperature, salinity, and zooplankton volumes were treated as covariates in the analysis. The surface temperature proved to be a highly important factor in explaining the distribution of larvae, but salinity and zooplankton volumes were not. Catches of Thunnus albaeares and Euthynnus lineatus were rare during the course of the study; these are discussed in qualitative terms with respect to the time of the year and the surface temperature. The distribution of larval tunas in the area of study was compared with the distribution of surface water masses. It appeared that these masses had no influence per se on the distribution of larvae. SPANISH: Este estudio está basado en las recolecciones de larvas de Thunnus albacares, Eutbynnus lineatus, y Auxis sp. obtenidas según los arrastres superficiales y oblicuos de la red, realizados durante siete cruceros, cada uno a la entrada del Golfo de California a lo largo de un derrotero comparable, y cada uno durante distintos meses. Las mediciones correspondientes de la temperatura superficial, salinidad y de zooplancton se realizaron en cada una de las estaciones de plancton. Las capturas de larvas Auxís sp. fueron examinadas mediante el análisis de la varianza para determinar cuales características ambientales se encontraban asociadas con el desove de este atún según lo indicaba la distribución de las larvas, y para obtener alguna idea del comportamiento de las larvas en sí mismas. Las pruebas indicaron que el desove de Auxis sp. varió significativamente entre los diferentes meses de los cruceros; indicaron también que si las larvas eran capaces de evitar el aparato de muestreo, esta habilidad no se relacionaba a las características asociadas con la hora del día de acuerdo a las condiciones de luz. El análisis no demostró ningún cambio en la distribución vertical de las larvas durante los meses del experimento. Se determinó que las larvas no exhiben un movimiento vertical diario. Las mediciones de temperatura, salinidad, y de los volúmenes de zooplancton fueron tratadas como covariables en el análisis. La temperatura superficial demostró ser un factor altamente importante en la explicación de la distribución de las larvas, pero la salinidad y los volúmenes de zooplancton no lo fueron. Las capturas de Thunnus albacares y Eutbynnus lineatus fueron pocas durante el curso de este estudio; éstas se discuten en términos cualitativos respecto a la época del año y a la temperatura superficial. La distribución de los atunes larvales en el área de estudio fue comparada con la distribución de las masas superficiales de agua. Parece que estas masas no tienen influencia per se en la distribución de las larvas. (PDF contains 40 pages.)

Recherches des larves de thonides dans l'Atlantique tropical-oriental: campagnes effectuées en 1976-1977 par le N/O Capricorne

This study gives the results of oblique plankton hauls (from the sea-surface to the top of the thermocline), made during the dry season (January to March) by oceanographic vessel R.V. Capricorne during three cruises, of tuna larvae research in 1976 and 1977, between the African Coast and the Equator, from 17 degrees W to 9 degrees E.

Onshore-offshore distribution and abundance of tuna larvae (Pisces: Scombridae: Thunnini) in near-reef waters of the Coral Sea

The on-offshore distributions of tuna larvae in near-reef waters of the Coral Sea, near Lizard Island (14°30ʹS, 145°27ʹE), Australia, were investigated during four cruises from November 1984 to February 1985 to test the hypothesis that larvae of these oceanic fishes are found in highest abundance near coral reefs. Oblique bongo net tows were made in five on-offshore blocks in the Coral Sea, ranging from 0–18.5 km offshore of the outer reefs of the Great Barrier Reef, as well as inside the Great Barrier Reef Lagoon. The smallest individuals (<3.2 mm SL) of the genus Thunnus could not be identified to species, and are referred to as Thunnus spp. We found species-specific distributional patterns. Thunnus spp. and T. alalunga (albacore) larvae were most abundant (up to 68 larvae/100 m2) in near-reef (0–5.5 km offshore) waters, whereas Katsuwonus pelamis (skipjack tuna) larvae increased in abundance in the offshore direction (up to 228 larvae/100 m2, 11.1–18.5 km offshore). Larvae of T. albacares (yellowfin tuna) and Euthynnus affinis (kawakawa) were relatively rare throughout the study region, and the patterns of their distributions were inconclusive. Few larvae of any tuna species were found in the lagoon. Size-frequency distributions revealed a greater proportion of small larvae inshore compared to offshore for K. pelamis and T. albacares. The absence of significant differences in size-frequency distributions for other species and during the other cruises was most likely due to the low numbers of larvae. Larval distributions probably resulted from a combination of patterns of spawning and vertical distribution, combined with wind-driven onshore advection and downwelling on the seaward side of the outer reefs.

Triglops dorothy, a new species of sculpin (Teleostei: Scorpaeniformes: Cottidae) from the southern Sea of Okhotsk

A new species of the cottid genus Triglops Reinhardt is described on the basis of 21 specimens collected in Aniva Bay, southern Sakhalin Island, Russia, and off Kitami, on the northern coast of Hokkaido, Japan, at depths of 73–117 m. Of the ten species of Triglops now recognized, the new species, Triglops dorothy, is most similar to T. pingeli Reinhardt, well known from the North Atlantic and North Pacific oceans and throughout coastal waters of the Arctic. The new species differs from T. pingeli in a combination of morphometric and meristic characters that includes most importantly the number of dorsolateral scales; the number of oblique, scaled dermal folds below the lateral line; and the number of gill rakers.

Evaluation of the In Situ Ichthyoplankton Imaging System (ISIIS): comparison with the traditional (bongo net) sampler

Plankton and larval fish sampling programs often are limited by a balance between sampling frequency (for precision) and costs. Advancements in sampling techniques hold the potential to add considerable efficiency and, therefore, add sampling frequency to improve precision. We compare a newly developed plankton imaging system, In Situ Ichthyoplankton Imaging System (ISIIS), with a bongo sampler, which is a traditional plankton sampling gear developed in the 1960s. Comparative sampling was conducted along 2 transects ~30–40 km long. Over 2 days, we completed 36 ISIIS tow-yo undulations and 11 bongo oblique tows, each from the surface to within 10 m of the seafloor. Overall, the 2 gears detected comparable numbers of larval fishes, representing similar taxonomic compositions, although larvae captured with the bongo were capable of being identified to lower taxonomic levels, especially larvae in the small (<5 mm), preflexion stages. Size distributions of the sampled larval fishes differed considerably between these 2 sampling methods, with the size range and mean size of larval fishes larger with ISIIS than with the bongo sampler. The high frequency and fine spatial scale of ISIIS allow it to add considerable sampling precision (i.e., more vertical sections) to plankton surveys. Improvements in the ISIIS technology (including greater depth of field and image resolution) should also increase taxonomic resolution and decrease processing time. When coupled with appropriate net sampling (for the purpose of collecting and verifying the identification of biological samples), the use of ISIIS could improve overall survey design and simultaneously provide detailed, process-oriented information for fisheries scientists and oceanographers.

Seabed classification for trawlability determined with a multibeam echo sounder on Snakehead Bank in the Gulf of Alaska

Rockfishes (Sebastes spp.) tend to aggregate near rocky, cobble, or generally rugged areas that are difficult to survey with bottom trawls, and evidence indicates that assemblages of rockfish species may differ between areas accessible to trawling and those areas that are not. Consequently, it is important to determine grounds that are trawlable or untrawlable so that the areas where trawl survey results should be applied are accurately identified. To this end, we used multibeam echosounder data to generate metrics that describe the seafloor: backscatter strength at normal and oblique incidence angles, the variation of the angle-dependent backscatter strength within 10° of normal incidence, the scintillation of the acoustic intensity scattered from the seafloor, and the seafloor rugosity. We used these metrics to develop a binary classification scheme to estimate where the seafloor is expected to be trawlable. The multibeam echosounder data were verified through analyses of video and still images collected with a stereo drop camera and a remotely operated vehicle in a study at Snakehead Bank, ~100 km south of Kodiak Island in the Gulf of Alaska. Comparisons of different combinations of metrics derived from the multibeam data indicated that the oblique-incidence backscatter strength was the most accurate estimator of trawlability at Snakehead Bank and that the addition of other metrics provided only marginal improvements. If successful on a wider scale in the Gulf of Alaska, this acoustic remote-sensing technique, or a similar one, could help improve the accuracy of rockfish stock assessments.

Distribution of ommastrephid paralarvae in the eastern tropical Pacific

Jumbo squid (Dosidicus gigas) and purpleback squid (Sthenoteuthis oualaniensis) (Teuthida: Ommastrephidae) are thought to spawn in the eastern tropical Pacific. We used 10 years of plankton tow and oceanographic data collected in this region to examine the reproductive habits of these 2 ecologically important squid. Paralarvae of jumbo squid and purpleback squid were found in 781 of 1438 plankton samples from surface and oblique tows conducted by the Southwest Fisheries Science Center (NOAA) in the eastern tropical Pacific over the 8-year period of 1998–2006. Paralarvae were far more abundant in surface tows (maximum: 1588 individuals) than in oblique tows (maximum: 64 individuals). A generalized linear model analysis revealed sea-surface temperature as the strongest environmental predictor of paralarval presence in both surface and oblique tows; the likelihood of paralarval presence increases with increasing temperature. We used molecular techniques to identify paralarvae from 37 oblique tows to species level and found that the purpleback squid was more abundant than the jumbo squid (81 versus 16 individuals).

Tracing sediment transport and bed regime in Nha Trang Bay

Three spatial structure groups of radionuclides in U and Th series, 210Pb-excess and 137Cs, and 40K were found based on analyzing temporal and spatial datum of their content by factor analysis with oblique rotation in Nhatrang bay. U and Th spatial structure with their contours decreased toward the offshore, ran longshore and divided seawater of bay into two parts with strong gradient on both sides. Inside part located from center of Nhatrang bay toward the seashore with three main deposit centers of their contents higher than 23 Bq/kg.dry for 238U and 40 Bq/kg.dry for 232Th, indicated unstability of shoreline. Almost sediments coming from river extended toward the offshore, were stopped and transported toward southeastern. The outside part was less than above mentioned content. The boundary line between two parts superposed with the constantly limit line of turbid plume in the rainy season. Direct influence of the continental runoff was limited by the 9 Bq/kg.dry contour of 238U, 19 Bq/kg.dry contour of 232Th. Longshore current was a predominant process whereas lateral transport as sifting and winnowing process of finer grains in sediments of Nhatrang bay. Areas that had very low content of 137Cs and 210 Pb-excess adjoining shoreline showed areas being eroded. Accumulation of 137Cs and 210 Pbexcess nearby river mouth characterized for fine compositions of sediments controlled by seasonal plumes and sites further toward the south indicated finer materials transported from river and accumulated in lack of hydrodynamic process. Near shore accumulation of 40K revealed the sediments there originated from bed erosion.

The study of the sedimentation mechanism in channels under the impact of tidal currents

The purpose of this research is to study sedimentation mechanism by mathematical modeling in access channels which are affected by tidal currents. The most important factor for recognizing sedimentation process in every water environment is the flow pattern of that environment. It is noteworthy that the flow pattern is affected by the geometry and the shape of the environment as well as the type of existing affects in area. The area under the study in this thesis is located in Bushehr Gulf and the access channels (inner and outer). The study utilizes the hydrodynamic modeling with unstructured triangular and non-overlapping grids, using the finite volume, From method analysis in two scale sizes: large scale (200 m to 7.5km) and small scale (50m to 7.5km) in two different time durations of 15 days and 3.5 days to obtain the flow patterns. The 2D governing equations used in the model are the Depth-Averaged Shallow Water Equations. Turbulence Modeling is required to calculate the Eddy Viscosity Coefficient using the Smagorinsky Model with coefficient of 0.3. In addition to the flow modeling in two different scales and the use of the data of 3.5 day tidal current modeling have been considered to study the effects of the sediments equilibrium in the area and the channels. This model is capable of covering the area which is being settled and eroded and to identify the effects of tidal current of these processes. The required data of the above mentioned models such as current and sediments data have been obtained by the measurements in Bushehr Gulf and the access channels which was one of the PSO's (Port and Shipping Organization) project-titled, "The Sedimentation Modeling in Bushehr Port" in 1379. Hydrographic data have been obtained from Admiralty maps (2003) and Cartography Organization (1378, 1379). The results of the modeling includes: cross shore currents in northern and north western coasts of Bushehr Gulf during the neap tide and also the same current in northern and north eastern coasts of the Gulf during the spring tide. These currents wash and carry fine particles (silt, clay, and mud) from the coastal bed of which are generally made of mud and clay with some silts. In this regard, the role of sediments in the islands of this area and the islands made of depot of dredged sediments should not be ignored. The result of using 3.5 day modeling is that the cross channels currents leads to settlement places in inner and outer channels in tidal period. In neap tide the current enters the channel from upside bend of the two channels and outer channel. Then it crosses the channel oblique in some places of the outer channel. Also the oblique currents or even almost perpendicular current from up slope of inner channel between No. 15 and No. 18 buoys interact between the parallel currents in the channel and made secondary oblique currents which exit as a down-slope current in the channel and causes deposit of sediments as well as settling the suspended sediments carried by these currents. In addition in outer channel the speed of parallel currents in the bend of the channel which is naturally deeper increases. Therefore, it leads to erosion and suspension of sediments in this area. The speed of suspended sediments carried by this current which is parallel to the channel axis decreases when they pass through the shallower part of the channel where it is in the buoys No.7 and 8 to 5 and 6 are located. Therefore, the suspended sediment settles and because of this process these places will be even shallower. Furthermore, the passing of oblique upstream leads to settlement of the sediments in the up-slope and has an additional effect on the process of decreasing the depth of these locations. On the contrary, in the down-slope channel, as the results of sediments and current modeling indicates the speed of current increases and the currents make the particles of down-slope channel suspended and be carried away. Thus, in a vast area of downstream of both channels, the sediments have settled. At the end of the neap tide, the process along with circulations in this area produces eddies which causes sedimentation in the area. During spring some parts of this active location for sedimentation will enter both channels in a reverse process. The above mentioned processes and the places of sedimentation and erosion in inner and outer channels are validated by the sediments equilibrium modeling. This model will be able to estimate the suspended, bed load and the boundary layer thickness in each point of both channels and in the modeled area.