Flow and chemical characteristics of the St. Johns River at Jacksonville, Florida

This report will be of substantial value to water managers in developing the St. Johns River as a multiple resource. Evaluation of the capacity of the river to accept pollutants without adversely affecting other uses requires detailed data of flow and chemical characteristics and an understanding of how they interact. (66 page document)

USGS/NOAA Workshop on Mycobacteriosis in Striped Bass, May 7-10, 2006, Annapolis, Maryland

As a Federal trust species, the well-being of the striped bass (Morone saxatilis) population along the Eastern Seaboard is of major concern to resource users. Striped bass are an extremely valuable commercial and recreational resource. As a principal piscivore in Chesapeake Bay, striped bass directly or indirectly interact with multiple trophic levels within the ecosystem and are therefore very sensitive to biotic and abiotic ecosystem changes. For reasons that have yet to be defined, the species has a high intrinsic susceptibility to mycobacteriosis. This disease has been impacting Chesapeake Bay striped bass since at least the 1980s as indicated by archived tissue samples. However, it was not until heightened incidences of fish with skin lesions in the Pocomoke River and other tributaries of the Chesapeake Bay were reported in the summer and fall of 1996 and 1997 that a great deal of public and scientific interest was stimulated about concerns for fish disease in the Bay. (PDF contains 50 pages)

Marine Mammal Strandings in the United States: Proceedings of the Second Marine Mammal Stranding Workshop, Miami, Florida, December 3-5, 1987

Over a decade ago, in August 1977, the First Marine Mammal Stranding Workshop was convened in Athens, Georgia. That workshop, organized by j.R. Geraci and D.J. St. Aubin, not only considered biology and pathology of stranded marine mammals, but it also served as a springboard for the formation of regional marine mammal stranding networks in the United States. The ramifications have been extremely important to the field of marine mammalogy since, for some species, examination or rehabilitation of stranded specimens serves as virtually the only source of information on distribution, anatomy, physiology, reproduction, and pathology. The First Marine Mammal Stranding Workshop led to increased awareness of the marine mammals themselves, as well as the logistic and legal factors associated with effective handling of the animals. A number of individuals indicated that they felt that a Second Marine Mammal Stranding Workshop held prior to the Seventh Biennial Conference on the Biology of Marine Mammals (Miami, Florida; December 1987) would be both timely and productive. Accordingly, we organized the workshop and scheduled it to occur on 3-5 December. Our goals for the workshop were several, including 1) providing descriptions of some research, especially new techniques, regarding stranded marine mammals; 2) providing a forum where scientists could interact and possibly initiate cooperative research activities; 3) presenting information regarding procedures used effectively to handle stranded animals; 4) assessing ways to standardize data and specimen collection, archiving, and retrieval; and 5) providing a forum for assessing accomplishments and status of regional stranding networks to date, as well as for making recommendations regarding future activities of the networks. Nearly 100 individuals representing Federal and State governments, academic institutions, the oceanarium industry, consulting groups, conservation organizations, and the private sector attended the workshop (see Workshop Participants, this volume). (PDF file contains 166 pages.)

Socio-economic implications of the fish export trade on the fishers and fisheries of Lake Victoria in Uganda

The purpose of this study was to investigate the implications of the fish export trade on the fishers and the fisheries resources of Lake Victoria, Uganda with respect to sustainability. Eight fish processing factories and ninety fishers were qualitatively investigated. Socio-economic characteristics of fishers and the economic characteristics of fish factories formed a basis for the analysis. Results of the research indicate that there is a relationship between the growth in fish export trade, particularly the growth in industrial fish processing (for export) and declining fisheries resources of the lake. However, whether or not that impact is positive or negative, and to what extent there is an impact, is highly dependent upon the underlying socio-economic considerations of the fishers to the process. The fish-ban imposed by the European Union countries was particularly decried by fishers and factory owners as the main cause for the present poverty among the fishers. Fundamentally, several conflicting issues: ecological, physical and economic activities are a threat to the sustainability of the Lake Victoria fisheries, and for all that depend on and interact with the lake. There is urgent need to address the immediate issue of the growing riparian population and the global fish trade, to educate and train all the relevant actors in appropriate fisheries management techniques. Attitudes of fishers towards the fish factory developments are positive and this is a way forward for co-management for the sustainability of the fisheries resource.

Calibration of Grassholme Channels, 1982

Adjustment of experimental channels to give any specified pattern of water depth or velocity is complex and tedious because it involves a number of variables. Since some variables are not controllable and variables may interact, valve settings of the Grassholme channels were initially determined on an ad hoc basis to suit individual experiments. This method was used during 1982 but additional observations were made in order to gain more detailed understanding of the channel system and, as far as possible, to develop a guide to future short-cuts in attaining suitable channel settings for any given purpose. This report describes calibration of the Grassholme channels (using water of the Grassholme Reservoir) for the biological experiments of spring - summer 1982. The main variables that are discussed are valve turns and discharge and velocity and depth. It also seeks to establish relationships which will be of value in future managment of the channels for experimental purposes.

Decomposition in lake sediments: bacterial action and interaction

This review discusses the processes involved in the decomposition of organic carbon derived initially from structural components of algae and other primary producers. It describes how groups of bacteria interact in time and space in a eutrophic lake. The relative importance of anaerobic and aerobic processes are discussed. The bulk of decomposition occurs within the sediment. The role of bacteria in the nitrogen cycle and the iron cycle, and in sulphate reduction and methanogenesis as the terminal metabolism of organic carbon are described.

Fish bioecology in relation to sediments in the Mekong and in tropical rivers

Sediments are an essential component of rivers and of their biological functioning. In addition to their influence on river geomorphology (maintenance of river forms and habitats such as pools and sand bars), sediments also include nutrients, detritus and organic debris of various sizes which interact with the river’s different life forms, including fish. The interaction between sediments and aquatic organisms, directly or indirectly through the effects of sediments on physical habitats, unquestionably influences the biodiversity and productivity of a river. The current report reviews the interactions between sediments and fish in tropical rivers and in the Mekong, and focuses more specifically on a reduction of sediment loads following dam const

Interactions between marine mammals and pelagic longline fishing gear in the U.S. Atlantic Ocean between 1992 and 2004

The U.S. East Coast pelagic longline fishery has a history of interactions with marine mammals, where animals are hooked and entangled in longline gear. Pilot whales (Globicephala spp.) and Risso’s dolphin (Grampus griseus) are the primary species that interact with longline gear. Logistic regression was used to assess the environmental and gear characteristics that influence interaction rates. Pilot whale inter-actions were correlated with warm water temperatures, proximity to the shelf break, mainline lengths greater than 20 nautical miles, and damage to swordfish catch. Similarly, Risso’s dolphin interactions were correlated with geographic location, proximity the shelf break, the length of the mainline, and bait type. The incidental bycatch of marine mammals is likely associated with depredation of the commercial catch and is increased by the overlap between marine mammal and target species habitats. Altering gear characteristics and fishery practices may mitigate incidental bycatch and reduce economic losses due to depredation.

Management of wetland resources in the lower Mekong Basin: issues and future directions

The Lower Mekong Basin has extensive wetlands and these are being threatened by numerous problems. Most of these problems are interdependent and interact with one another. The lack of an appropriate definition of wetlands applicable to the region, pervasive inefficiencies and chronic lack of funds among riparian governments, and the poor appreciation of the true economic importance of wetlands and its resources are among the most prominent. The current definition, based on the Convention on Wetlands (Ramsar, Iran, 1971), is too broad when compared to the understanding of wetlands as being swamps, marshes and the like, and was developed specifically for wetlands with international importance as waterfowl habitats. Furthermore, wetlands are composed of different types of resources, which require different modes of management. Often, institutional competition, overlapping mandates and sometimes jealousies occur between government departments when they try to assert their authority on a particular wetland resource and use, and put forward their development plans without considering how these may conflict with other wetlands uses. Finally, effective wetland management requires reliable statistics or information on rate of harvest of natural resources such as fish and others, fishing/harvesting methods over time in order to determine the level of exploitation, and the status of the natural resources. This information is needed to identify opportunities for expansion, to establish historical trends, and to determine when management interventions are necessary to protect the resources from being overused by other developments. In order to address these issues, ICLARM - The World Fish Center has launched a project, the aim of objectives of which are described in this paper.

The GCRMN - coordinating coral reef monitoring efforts for effective management

The Global Coral Reef Monitoring Network (GCRMN) is an operational unit of the International Coral Reef Initiative (ICRI), established in 1995 and maintained by the Australian Institute of Marine Science (AIMS). The main responsibilities are to provide data and information on the global status of coral reefs, assess how people use and interact with reefs, assist coral reef management, and raise awareness among all stakeholders of the status of reefs and the need for urgent action. It is represented by 17 regional nodes, with overall coordination by a global coordinator based at AIMS.

Comparison of average larval fish vertical distributions among species exhibiting different transport pathways on the southeast United States continental shelf

Water currents are vertically structured in many marine systems and as a result, vertical movements by fish larvae and zooplankton affect horizontal transport (Power, 1984). In estuaries, the vertical movements of larvae with tidal periods can result in their retention or ingress (Fortier and Leggett, 1983; Rijnsdorp et al., 1985; Cronin and Forward, 1986; Forward et al., 1999). On the continental shelf, the vertical movements of organisms interact daily and ontogenetically with depth-varying currents to affect horizontal transport (Pillar et al., 1989; Barange and Pillar, 1992; Cowen et al., 1993, 2000; Batchelder et al., 2002).

Trawling Operations and South African (Cape) Fur Seals, Arctocephalus pusillus pusillus

South African (Cape) fur seals, Arctocephalus pusillus pusillus, interact with the South African trawl fisheries-offshore demersal, inshore demersal, and midwater fisheries. These interactions take thef ollowing forms: Seals take or damage netted fish, on particular vessels they become caught in the propeller, seals drown in the nets, live seals come aboard and may be killed. Except in specific cases of seals damaging particular trawler propellers, interactions result in little cost to the offshore and midwater trawl fisheries. For the inshore fishery, seals damage fish in the net at an estimated cost in excess of R69, 728 (US$18,827) per year, but this is negligible (0.3%) in terms ofthe value of the fishery. Seal mortality is mainly caused by drowning in trawl nets and ranges from 2,524 to 3,636 seals of both sexes per year. Between 312 and 567 seals are deliberately killed annually, but this most likely takes place only when caught and they enter the area below deck, where they are difficult to remove, and pose a potential threat to crew safety. Overall, seal mortality during trawling operations is negligible (0.4-0.6%) in terms of the feeding population of seals in South Africa.

Feasibility of using sea surface temperature imagery to mitigate cheloniid sea turtle–fishery interactions off the coast of northeastern USA

As sea turtles migrate along the Atlantic coast of the USA, their incidental capture in fisheries is a significant source of mortality. Because distribution of marine cheloniid turtles appears to be related, in part, to sea surface temperature (SST), the ability to predict water temperature over the continental shelf could be useful in minimizing turtle–fishery interactions. We analyzed 10 yr of advanced very high resolution radiometer (AVHRR) SST imagery to estimate the proportion of 18 spatial zones, nearshore and offshore of Hatteras, North Carolina, USA (35° N), to north of Cape Sable, Nova Scotia (44° N), at temperatures >10 to 15°C, by week. Detailed examples for 11°C, the temperature employed by some management actions in the study area, and for 14°C, the lowest temperature at which turtles were sighted by some studies in the area, demonstrate a predictable pattern of rapid warming in March and April, followed by rapid cooling in October and November, with nearshore waters warming more rapidly than those offshore. Of those loggerhead turtles Caretta caretta that stranded, were sighted, or were incidentally captured between Cape Hatteras, North Carolina, and Cape Cod, Massachusetts, those at lower latitudes occurred when 25% or more of the area reached a water temperature of 11°C, while those in the northern zones did not occur until 50% or more of the area had reached a water temperature of 14°C. This analysis provides a means of predicting marine cheloniid turtle presence, which can be helpful in regulating fisheries that seasonally interact with turtles.

Methodology for valuing wetlands in Uganda

The wetlands in Uganda are undergoing rapid degradation. Swamps provide a habitat for birds, fishes and other animals. They have many ecological functions and, furthermore, supply people with multiple resources, such as reeds, herbs, fish and agricultural products. Although some'uses of wetland are sustainable, others lead to rapid deterioration. The main threat to swamps are human activities. One reason for the progressive destruction of wetlands is that the people may not appreciate the existence of and the treasures represented by wetlands even if they live in arm long distance from them. Another reason is that the two most important user groups of wetlands, farmers and fishermen, although having conflicting interests concerning the wetlands, hardly interact. A study, done as part of the Ecotone Project at the Fisheries Research Institute (FIRI), tries to evaluate in monetary terms how much Uganda loses with progressive destruction of wetlands. The study looks first at which uses of the wetlands are of importance and thereafter it examines, what data is needed and available to calculate the values of those uses.