The coastal environment and human health: microbial indicators, pathogens, sentinels and reservoirs

Innovative research relating oceans and human health is advancing our understanding of disease-causing organisms in coastal ecosystems. Novel techniques are elucidating the loading, transport and fate of pathogens in coastal ecosystems, and identifying sources of contamination. This research is facilitating improved risk assessments for seafood consumers and those who use the oceans for recreation. A number of challenges still remain and define future directions of research and public policy. Sample processing and molecular detection techniques need to be advanced to allow rapid and specific identification of microbes of public health concern from complex environmental samples. Water quality standards need to be updated to more accurately reflect health risks and to provide managers with improved tools for decision-making. Greater discrimination of virulent versus harmless microbes is needed to identify environmental reservoirs of pathogens and factors leading to human infections. Investigations must include examination of microbial community dynamics that may be important from a human health perspective. Further research is needed to evaluate the ecology of non-enteric water-transmitted diseases. Sentinels should also be established and monitored, providing early warning of dangers to ecosystem health. Taken together, this effort will provide more reliable information about public health risks associated with beaches and seafood consumption, and how human activities can affect their exposure to disease-causing organisms from the oceans.

Atlas of the shallow-water benthic habitats of Majuro Atoll, Republic of the Marshall Islands

Digital maps of the shallow (<~30m deep) coral reef ecosystems of Majuro Atoll, Republic of the Marshall Islands, were created through visual interpretation of remote sensing imagery acquired between 2004 and 2006. Reef ecosystem features were digitized directly into a Geographic Information System. Benthic features were categorized according to a classification scheme with attributes including zone (location such as lagoon or forereef, etc.), structure (bottom type such as sand or patch reef, etc.) and percent hard bottom. This atlas consists of 27 detailed maps displaying reef zone and structure of coral ecosystems around Majuro. Adjacent maps in the atlas overlap slightly to ensure complete coverage. Maps and associated products can be used to support science and management activities on Majuro reef ecosystems including inventory, monitoring, conservation, and sustainable development applications. Maps are not to be used for navigation.

Atlas of the shallow-water benthic habitats of American Samoa, Guam, and the Commonwealth of the Northern Mariana Islands

The National Oceanic and Atmospheric Administration (NOAA) National Ocean Service (NOS) initiated a coral reef research program in 1999 to map, assess, inventory, and monitor U.S. coral reef ecosystems (Monaco et al. 2001). These activities were implemented in response to requirements outlined in the Mapping Implementation Plan developed by the Mapping and Information Synthesis Working Group (MISWG) of the Coral Reef Task Force (CRTF) (MISWG 1999). As part of the MISWG of the CRTF, NOS' Biogeography Branch has been charged with the development and implementation of a plan to produce comprehensive digital coral-reef ecosystem maps for all U.S. States, Territories, and Commonwealths within five to seven years. Joint activities between Federal agencies are particularly important to map, research, monitor, manage, and restore coral reef ecosystems. In response to the Executive Order 13089 and the Coral Reef Conservation Act of 2000, NOS is conducting research to digitally map biotic resources and coordinate a long-term monitoring program that can detect and predict change in U.S. coral reefs, and their associated habitats and biological communities. Most U.S. coral reef resources have not been digitally mapped at a scale or resolution sufficient for assessment, monitoring, and/or research to support resource management. Thus, a large portion of NOS' coral reef research activities has focused on mapping of U.S. coral reef ecosystems. The map products will provide the fundamental spatial organizing framework to implement and integrate research programs and provide the capability to effectively communicate information and results to coral reef ecosystem managers. Although the NOS coral program is relatively young, it has had tremendous success in advancing towards the goal to protect, conserve, and enhance the health of U.S. coral reef ecosystems. One objective of the program was to create benthic habitat maps to support coral reef research to enable development of products that support management needs and questions. Therefore this product was developed in collaboration with many U.S. Pacific Territory partners. An initial step in producing benthic habitat maps was the development of a habitat classification scheme. The purpose of this document is to outline the benthic habitat classification scheme and protocols used to map American Samoa, Guam and the Commonwealth of the Northern Mariana Islands. Thirty-two distinct benthic habitat types (i.e., four major and 14 detailed geomorphological structure classes; eight major and 18 detailed biological cover types) within eleven zones were mapped directly into a geographic information system (GIS) using visual interpretation of orthorectified IKONOS satellite imagery. Benthic features were mapped that covered an area of 263 square kilometers. In all, 281 square kilometers of unconsolidated sediment, 122 square kilometers of submerged vegetation, and 82.3 square kilometers of coral reef and colonized hardbottom were mapped.

On the operation of small shrimp trawls in shallow waters-scope-ratio and size-depth relation

Studies on small trawls seem to be comparatively less. These trawls are generally operated in shallower waters, where due to the limitations in the length of warp that could be released, size restrictions have to be considered for their efficient functioning. An attempt has been made to assess the effective scope-ratio of length of warp required for the operation of trawls at shallower depth and to a judge the size of trawl suitable for use at lower depths.

A Preliminary survey of 21 Ceylon lakes. 3. Parasites and predators, food of fish, and marginal fauna

Three nematodes, two acanthocephalans and three cestodes were collected by dissecting 15 species of fish. Of these parasites only Hedruris sp. a larval nematode is responsible directly for the death of fish, since it is found in predatory species a reduction of these might prove of considerable consequence to fish, production. Bothriocephalus gowleonensis, a cestode probably introduced from China with Chinese carp, was recorded in an indigenous carp Puntius sarana. This parasite causes heavy mortality in grass carp in China and is a potential danger to local species. A single crustacean parasite was recorded. It is likely that they are widespread. No protozoa were recorded but there can be little doubt that they occur in local freshwater species and may be of considerable importance in fisheries. Several predators (insects, fish and other vertebrates) were recorded and are doubtless of considerable importance. However, the role of parasites and of predators (especially fishes) in relation to the productivity of fisheries can hardly be assessed at present and needs further study. A study of the fauna found at the shallow edges of 21 irrigation reservoirs showed an abundance of fauna in the low-country reservoirs whilst the up-country reservoirs had a poor fauna. The fauna showed insects, crustacea and mollusca in this order of abundance. The presence of insect and molluscs feeding fish in our fauna shows that these rich sources of food are being utilised.

Fresh water fishery resources

The inland fresh waters of the island can be roughly divided into the following as far as fish production is concerned: (a) Perennial shallow irrigation reservoirs of the low-country, comprising about 120,000 acres. (b) " Villus" or flood lakes of the low country many of which are perennial, comprising about 30,000 acres. (c) Seasonal village tanks, mainly in the low-country, comprising about 30,000 acres. (d) Deep reservoirs (irrigation as well as hydro-electric) occurring in up-country and low-country comprising about 50,000 acres. (e) Rivers and streams comprising about 20,000 acres. The total area of all these waters is about 250,000 acres.

A preliminary study of two village tanks (reservoirs) in the Polonnaruwa area with biological notes on these reservoirs in Ceylon

The present study was initiated in conjunction with a project to utilize some of these small tanks as fishponds by introducing desirable species like Tilapia mossambica Peters and harvesting them at the end of a single season which may vary from 4-8 months depending on the reservoir. Two reservoirs Timbirigaswewa and Dalukanawewa were chosen for this study. Both of these are in the Polonnaruwa area (Fig. 1). Timbirigaswewa (Fig 4) is as all rain fed tank of about 30 acres while Dalukanawewa (Fig. 2) is stream fed with an acreage of just over 100.

A short note on the available information about demersal fish on the shallow part of Sofala Bank

The present information on the biomass and catch of demersal species which constitute a large part of the by-catch of the shrimp trawlers on the Sofala Bank (Mozambique), and thus seem to be more vulnerable than the pelagic stocks to an increase in effort is described. In addition, preliminary data on growth and mortality of two demersal species, Johnius belengerii and Otolithes ruber , which are frequently found in the by-catch, is presented.

State of the stocks of shallow water prawns at Sofala Bank

In 1977 a preliminary assessment of the shallow water prawn (Penaeus indicus ) stocks at Sofala Bank (Mozambique) was made (Ulltang et al., 1980). Using additional data from 1977-1982, the first assessment was updated in 1980 (Ulltang, 1980) and in 1983 (Ulltang et al., 1983). The present report includes a detailed description of data and explanations of the methods used in the last assessment. Data from 1983, which were not available during the last assessment, are also included.

A preliminary assessment of the shallow water prawn stocks off Mocambique, North of Beira

At present, the trawl fishery for shallow water prawns is the only industrialized national fishery in Mozambique. Most of the catch is exported. Plans are laid for expansion of the fishery, and this report is an attempt to make a preliminary assessment of the potential yields from the stocks occupying the shallow water areas between Beira and Angoche.

A report on a survey with the r/v "Ernst Haeckel" in July-August 1980: shallow-water shrimp and by-catch, oceanography

A survey of the Sofala Bank (Mozambique) was conducted to: estimate the abundance of shallow-water shrimp in the area between 16 degree 20'S and 20 degree 20'S, from 5 to 100 meters; estimate the shallow-water shrimp species composition and distribution pattern of main species. Collect biological data of the main species, Penaeus indicus and Metapenaeus monoceros; study the shrimp by-catch, species composition and biological data collection of the most abundant species of commercial value; and collect environmental data to clarify the shelf circulation on the Sofala Bank and the main oceanic features in the regions 15 degree S to 18 degree S and south of 22 degree S.

Estimations of maximum sustainable fish yields and stocking densities of inland reservoirs of Sri Lanka

The Maximum Sustainable Yields of all fish species for 9 man-made reservoirs in Sri Lanka were calculated by the simplified version of Schaefer Model. The relationship between the Maximum Sustainable Yield (MSY) and Morpho-edaphic Index, (MEI) for Sri Lankan reservoirs was found to be: Log sub(e) MSY = 0.9005 log sub(e) MEI + 1.9220. MSY for these reservoirs were estimated using this relationship. The number of Tilapia) juveniles needed to be recruited to the fisheries of some reservoirs in addition to the present recruitment to increase the fish production to the level estimated by MEI relationship were calculated mathematically.

Fishing gear in freshwater reservoirs of India

Consequent on the great emphasis given to irrigation, power generation and flood control, several river valley reservoirs have been formed. The fact that these reservoirs support a fairly rich fishery potential needs no special mention. The total reservoir water area in the country is 6.4 lakh h.a. (16 lakh acres) and the yield is 5 to 8 kgm/h. a. in certain reservoirs, rising up to 40 kgm/h.a. in some of the highly productive ones.

Stick held drag net for shore line fishes of reservoirs

Observations on the use of stick held drag nets for the removal of shore line fish, which adversely affect the growth of commercially important species in reservoirs, are presented.