Recovery of the Gulf of Maine--Georges Bank Atlantic herring (Clupea harengus) complex: perspectives based on bottom trawl survey data

NMFS bottom trawl survey data were used to describe changes in distribution, abundance, and rates of population change occurring in the Gulf of Maine–Georges Bank herring (Clupea harengus) complex during 1963–98. Herring in the region have fully recovered following severe overfishing during the 1960s and 1970s. Three distinct, but seasonally intermingling components from the Gulf of Maine, Nantucket Shoals (Great South Channel area), and Georges Bank appear to compose the herring resource in the region. Distribution ranges contracted as herring biomass declined in the late 1970s and then the range expanded in the 1990s as herring increased. Analysis of research survey data suggest that herring are currently at high levels of abundance and biomass. All three components of the stock complex, including the Georges Bank component, have recovered to pre-1960s abundance. Survey data support the theory that herring recolonized the Georges Bank region in stages from adjacent components during the late 1980s, most likely from herring spawning in the Gulf of Maine.

An examination of spatial and temporal genetic variation in walleye pollock (Theragra chalcogramma) using allozyme, mitochondrial DNA, and microsatellite data

We used allozyme, microsatellite, and mitochondrial DNA (mtDNA) data to test for spatial and interannual genetic diversity in wall-eye pollock (Theragra chalcogramma) from six spawning aggregations representing three geographic regions: Gulf of Alaska, eastern Bering Sea, and eastern Kamchatka. Interpopulation genetic diversity was evident primarily from the mtDNA and two allozyme loci (SOD-2*, MPI*). Permutation tests ˆindicated that FST values for most allozyme and microsatellite loci were not significantly greater than zero. The microsatellite results suggested that high locus polymorphism may not be a reliable indicator of power for detecting population differentiation in walleye pollock. The fact that mtDNA revealed population structure and most nuclear loci did not suggests that the effective size of most walleye pollock populations is large (genetic drift is weak) and migration is a relatively strong homogenizing force. The allozymes and mtDNA provided mostly concordant estimates of patterns of spatial genetic variation. These data showed significant genetic variation between North American and Asian populations. In addition, two spawning aggregations in the Gulf of Alaska, in Prince William Sound, and off Middleton Island, appeared genetically distinct from walleye pollock spawning in the Shelikof Strait and may merit management as a distinct stock. Finally, we found evidence of interannual genetic variation in two of three North American spawning aggregations, similar in magnitude to the spatial variation among North American walleye pol-lock. We suggest that interannual genetic variation in walleye pollock may be indicative of one or more of the following factors: highly variable reproductive success, adult philopatry, source-sink metapopulation structure, and intraannual variation (days) in spawning timing among genetically distinct but spatially identical spawning aggregates.

Population dynamics and stock assessment of Koth (Otolithoides biauritus Cantor, 1850) along the north-west coast of India

MSY, growth, selection and mortality parameters of Otolithoides biauritus have been worked out from data collected by MFV Saraswati of CIFE, and length frequency data from Ferry Wharf, Sasson dock, and Versova fish landing centres of Bombay. Values of L infinity, K, and t omicron obtained from length frequency study are 1572 mm, 0.2633/yr and 0.0289 yr respectively, and of weight growth parameters are W infinity = 10067 g, K = 0.03904/yr and t omicron = 0.0137 yr. Selection parameters are L + 150 mm, t sub(r) + 0.4167 yr lc + 240 mm and t omicron = 0.6367 yr. Selection factor (K) for codent worked out to be 12. Based on Z = 0.6486, the MSY of O. biauritus off northwest coast of India is assessed as 1,802 tons which is slightly higher than the current catch level of 1,634 tons.

Population dynamics of Harpodon nehereus (Ham.-Buch.) from the Kutubdia channel of Bangladesh

ELEFAN-Φ, ELEFAN-I, ELEFAN-II were used to estimate the parameters of population of Harpodon nehereus from length-frequency data collected from Kutubdia channel of Bangladesh coastal water. The Lα and K were found to be 24.48 cm and 1.50/year. The annual rate of natural mortality (M) and fishing mortality (F) were found to be 2.46 and 3.27 respectively. The rate of exploitation (E) was estimated as 0.57. The mean length at first capture (Lc) was estimated as 6.747 cm. This species was recruited in the fishery during March to May, August and October. The Peak recruitment appeared between March to April. Emax. was found to be 0.501. The present investigation clearly showed the over fishing (E>0.50) of H. nehereus in the investigated area of Bangladesh coastal water.

Development of a new model of feeding strategy analysis of fish incorporating resource availability and use data

A feeding strategy model is proposed using stomach content and resource availability data as a modification to Costello (1990) and Amundsen et al. (1996). Incorporation of feeding electivity index (E) instead of the prey-specific abundance signifies the importance of resource availability in prey selection as well as the predator's ability to specialize, generalize or avoid particular prey items at the individual and population level.

Population dynamics of the ribbon fish, Lepturacanthus savala (Cuvier 1829) from the north-eastern part of the Bay of Bengal

Population parameters of Lepturacanthus savala from the trawl catches in the north-eastern part of the Bay of Bengal, Bangladesh were investigated based on length frequency data, using complete ELEFAN computer program. The asymptotic length (Lα) and growth constant (K) were estimated to be 106.50 cm (total length) and 0.80/year respectively. Based on these growth parameters, the total mortality (Z) was estimated to be 1.89. The estimated values for natural mortality (M) and fishing mortality (F) were 1.08 and 0.81 respectively. The estimated value for the exploitation rate (E) using the length converted catch curve was 0.43. The recruitment pattern showed two peaks per year. The estimated sizes of L. savala at 25, 50 and 75% probabilities of capture were 57.49, 60.39 and 63.28 cm respectively. The estimated length weight relationship for combined sex was W=0.00093 TL(super)2.97

Population dynamics of penaeid prawn Penaeus merguiensis off Mumbai coast

Stock dynamics of Penaeus merguiensis was studied using length composition data collected separately for males and females during the period 1995-1998, at New Ferry Warf landing, centre in Greater Mumbai. Food and feeding, sex ratio, fecundity and length-weight relationships were worked out on a representative sub-sample. Asymptotic length (Loo) and growth coefficient (K) were estimated to be 220 mm and 1.80 per annum respectively for males. These parameters were respectively 281 mm and 1. 72 per annum in the case of females. The instantaneous rate of total mortality coefficient (Z) was found to be 9.79 and 7.44 per annum for males and females respectively. The annual natural mortality coefficient (M) was estimated to be 2.80 for males and 2.60 for females. As the exploitation ratio exceeded 0.5 in the case of both the males and females, the study suggests the necessity for reduction in fishing pressure in order to achieve Maximum Sustainable Yield (MSY).

Preliminary investigations on the population dynamics of Otolithes ruber (Sciaenidae) on Sofala Bank, Mozambique

Catch length-frequency data of Otolithes ruber (Schneider, 1801) obtained from the "Projecto de Pesca Experimental da RDA" on Sofala Bank, Mozambique, in 1987 were used to estimate growth parameters, mortalities and exploitation rates. The yield-and biomass-per-recruit analyses based thereon suggest that the stock is overfished.

Population dynamics and the management of the goat fish Upenaeus sulphureus from the Bay of Bengal

FiSAT program was used to estimate population parameters of Upenaeus sulphureus from length frequency data. Loc and K were found to be 22.7 em and 0.98 year1 respectively. The Wetherall plot provided an estimate of L= and Z/K were 21.585 em and 4.759 respectively. The annual rate of natural and fishing mortality were estimated as 1.91 and 3.86 respectively. The exploitation rate was 0.668. The selection pattern Lc was 10.824 em. Recruitment pattern suggest of two uneven seasonal pulses in March-April and August-October. Peaks appeared in August-October. Maximum yield could be achieved simultaneously increasing length at first capture to 10.0 em. The length weight relationship was found to be W =0.03065 Lz.8328. Highest yield and price could be achieved by decreasing the fishing mortality to 0.9 coefficient rate.

Population dynamics and the management of the Indian mackerel Rastrelliger kanagurta from the Bay of Bengal

FiSAT program was used to estimate population parameters of Rastrelliger kanagurta from length frequency data. Loc and K were found to be 27.4 em and 0.90 year1 respectively. The Wetherall plot provided an estimate of Loc and Z/K were 26.7 cm and 4.683 respectively. The annual rate of natural and fishing mortality were estimated as 1.71 and 3.21 respectively. The exploitation rate was 0.652. The selection pattern L50 was 18.09 cm. Recruitment pattern suggests two seasonal pulses one in March-May and another in September-October. Peak recruitment appeared in March-May. Maximum yield could be achieved by decreasing length at first capture to 13.0 em. The relationship between total length and body weight was found to be W = 0.01583 L8952. Yield and stock prediction analysis suggested that highest yield and price could be achieved by decreasing the fishing mortality to 2.0 coefficient rate.

Population dynamics of killifish Aphanius dispar (Ruppel) in Sandspit area off Karachi

Growth and mortality parameters of Aphanius dispar a cyprinoides generally observed in the catches of near shore area were estimated from the length frequency data collected from Sandspit area of Karachi, using LFSA. The von Bertalanffy growth parameters were estimated as Loo=71.73 mm & K=L35/yr for Male Aphanius dispar and Loo=70.66 & K=l.41 for female. Total Mortality coefficient (Z) was estimated using Length converted catch curve which is equal to 2.12/yr, for male and for female 2.19/yr. Natural mortality (M) was estimated by Pauly's empirical formula: M=l.64/yr (male) and 1.70/yr (female). The species also displayed two cohorts a year.

Dynamics of parasite population and its histopathological and histophysiological effects in the stomach of a freshwater fish

The caryophyllaeid cestode Lytocestoides fossilis infects the freshwater catfish Heteropneustes fossilis. The study was conducted for two consecutive years (2004-06) to record the bio-statistical data of the parasite. The incidence, intensity, density and index of infection of the parasite have been recorded. The infection was more during June to September, moderate during February to May and low during October to January. The parasite brought about severe histopathological changes in the stomach of infected fish. The changes observed in the stomach of fish included structural damage of the villi, inflammation, and fibrosis associated with hyperplasia and metaplasia. The hypertrophy of mucous layer led to vacuolation and necrosis. Histochemical changes were noticed with enhanced carbohydrate, protein and lipid contents. The enhanced substrate content in the infected organ might be due to the disfunctioning of the digestive tract, which results in the accumulation of various metabolites. Mucus secretion was triggered as a protective interaction against parasitic invasion. The parasitic infection affects the general metabolic state of the host and as the result, the fish becomes sluggish and moribund.

Population genetic structure of Rutilus frisii kutum in Caspian Sea using biometry and microsatellite molecular technique

In order to carry out Biometric studies, 75 samples were caught from 3 locations ( Tajan river, Sefidrud and Shirud) using Salic and the length (±1 mm) and weights (± 5 gr) of samples were determined. Using One-way ANOVA by SPPSS software, there wasn’t significant difference between locations in length and fecondity (P ≥0.01(, but there was significant difference between Shirud and tajan samples with sefidrud in weight ) P≤0.01(. In order to carry out genetic variation studies, 210 fish were caught from 3 different regions of the Iranian coastline (Khoshkrud, Tonekabon, Gorganrud) and 1 region in Azerbaijan (Waters of the Caspian Sea close to Kura River mouth) during 2008-2009 . Genomic DNA was extracted of fin using the phenol-chloroform. The quantity and quality of DNA from samples were assessed by spectrophptometer and 1% agarose gel electro-phoresis. PCR was carried out using 15 paired microsatellite primers. PCR products were separated on 8% polyacrylamide gels that were stained using silver nitrate. Molecular weight calculate using UVTech software. The recorded microsatellite genotypes were used as input data for the GENALEX software version 6 package in order to calculate allele and genotype frequencies, observed (Ho) and (He) expected heterozygosities and to test for deviations from Hardy-Weinberg equilibrium. Genetic distance between two populations was estimated from Nei standard genetic distance and genetic similarity index (Nei, 1972). Genetic differentiation between populations was also evaluated by the calculation of pairwise estimates of Fst and Rst values. From 15 SSR markers were used in this investigation, 9 of them were polymorph. Average of expected and observed heterozygosity was 0.54 and 0.49 respectively. Significant deviations from Hardy-Weinberg expectations were observed in all of location except Anzali lagoon- autumn in AF277576 and EF144125, Khoshkrud in EF144125 and Gorganrud and Kura in AF277576. Using Fst and Rst there was significant difference between locations ) P≤0.01(. According to Fst , the highest population differentiation (Fst= 0.217) was between Gorganrud and Khoshkrud that have the lowest Nm and the lowest (Fst= 0.086) was between Gorganrud and Tonekabon that have the highest Nm. Using Rst the highest population differentiation (Rst= 0.271) was between Tonekabon and spring Anzali lagoon and the lowest (Rst= 0.026) was between Tonekabon and Autumn Anzali 159 lagoon. Also the difference between Spring Anzali lagoon and Autumn Anzali lagoon was noticeable (Fst=0.15). AMOVA analysis with consideration of 2 sampling regions (Iran and Azerbaijan) and 7 sampling locations (Iran: Khoshkrud, Tonekabon, Gorganrud, Spring Anzali lagoon and Autumn Anzali lagoon ; Azerbaijan: the Kura mouth) revealed that almost all of the variance in data namely 83% )P≤0.01( was within locations, Genetic variances among locations was 14% )P≤0.01( and among regions was 3% )P≤0.01(. The genetic distance was the highest (0.646) between Gorganrud and Autumn Anzali lagoon populations, whereas the lowest distance (0.237) was between Gorganrud and Tonekabon River. Result obtained from the present study show that at least 2 different population of Rutilus frissi kutum are found in the Caspian sea,which are including the kura river population and the southern Caspian sea samples and it appears that there is more than one population in southern Caspian sea that should be attantioned in artifical reproduction Center and stoke rebilding.

Kilka population dynamics in the south of the Caspian Sea

Populations of kilka in the Caspian Sea have important role in the food chain. This study was conducted to determine population parameters of three species of kilka in the south of the Caspian Sea, during 2006-2007. Mean length was 102.4±9.7 mm for common kilka, 117.8±6.9 mm for anchovy and 119.5±10.9 mm for bigeye. The relationship between length and weight indicated the negative allometric growth in the all three species. Mean age for common kilka, anchovy and bigeye were 3.6, 4.6 and 4.6 years, respectively. Sex ratio (M:F) were 0.52:1 for anchovy, 0.60:1 for common kilka and 1.60:1 for bigeye. The value of growth coefficient (K) was the highest (0.321) for the common kilka, (0.267) for the bigeye, and the lowest for the anchovy kilka (0.245). Total mortality estimated from the descending of the catch curve using the age structure, Z=1.280 yr-1 for common kilka, Z=1.067 yr-1 for anchovy, and Z=1.015 yr-1 for bigeye. Natural mortality (M) were estimated using Pauly formula as M=0.622, M=0.537 and M=0.503 per year for common kilka, bigeye and anchovy, respectively. Value of fishing mortality (F) were estimated from Z and M, as F=0.658 for common kilka, F=0.564 for anchovy and F=0.478 for bigeye. The exploitation rate (E) were estimated E=0.514 for common kilka, E=0.528 for anchovy and E= 0.471 for bigeye. The estimate of MCY (Maximum Constant Yield) was calculated using the more reliable time series of commercial catch data from 2001-2007, which resulted in an estimate of MCY for the kilka fishery of 14100 tonnes.

Study of inter species diversity and population structure by molecular genetic method in Iranian Artemia

Artemia is a small crustacean that adapted to live in brine water and has been seen in different brine water sources in Iran. Considering the importance of genetic studies manifest inter population differences in species, to estimate genetic structure, detect difference at molecular level and separate different Artemia populations of Iran, also study of phylogenic relationships among them, samples of Artemia were collected from nine region: Urmia lake in West Azerbaijan, Shoor and Inche-Borun lakes in Golestan, Hoze-Soltan and Namak lakes in Qom, Maharloo and Bakhteghan lakes in Fars, Nough pool in Kerman and Mighan pool in Markazi and DNA extracted by phenol-chloroform method. Primers designed on a ribosomal fragment (16s rRNA) of mt DNA sequence and PCR was done. Digestion of the 1566 bp segment PCR product by 10 restriction endonuclease (Alu I, EcoR I, Eco47 I, Hae III, Hind III, Hinf I, Mbo I, Msp I, Rsa I, TaqI) showed 25 different haplotypes: 9 in Urmia, 4 in Shoor and Inche- Borun, 1 in Namak and Hoze-Soltan, 3 in Mighan, 1 in Bakhtegan Maharlo, 3 in Maharloo and 4 in Nough. Measurement of haplotype and nucleotide diversity intra population and nucleotide diversity and divergence inter populations and evolutionary distance between haplotypes showed a high diversity in mitochondrial genome of Artemia in studied regions whose results are similar to those explained for highly geographic expansion organism. In addition, results showed considerable heterogeneity between different populations and there are enough evidences in haplotypic level for separation of studied samples and division of Iranian Artemia to seven populations including Urmia, Shoor and Inche-Borun, Hoze-Soltan and Namak, Maharloo, Bakhteghan, Nough and Mighan. Phylogenetic analysis of the 16S rRNA data set resulted strict consensus and neighbor joining distance trees, demonstrated that all samples were monophyletic and parthenogenetic form derivation from bisexual populations and genetically high resemblance to those of A. urmiana. Study of 270 specimens from different region showed the genus Artemia in Iran clustered into three clades including: 1- Shoor, Inche-Burun, Hoze-Soltan, Namak, Bakhtegan and Maharloo 2- Nough and Mighan 3- Urmia. Totally, obtained results indicated to ability of used techniques for study of inter species diversity, population structure, reveal of phylogenic relationship and dividing of different populations of Artemia in Iran.