The genetic structure and phylogenetics of pikeperch (Sander lucioperca) Anzali and Amirkolaye wetlands and perch (Perca fluviatilis) populations in Aras Dam and south-west of the Caspian Sea

The genetic structure of pikeperch (Sander lucioperca) and perch (Perca fluviatilis) populations was studied using microsatellite technique. A total of 207 specimens of adult pikeperch were collected from Aras dam (57 specimens), Anzali wetland (50 specimens), Talesh (50 specimens) and Chaboksar (50 specimens) coasts. Also a total of 158 specimens of adult perch were collected from Anzali (Abkenar (50 specimens)and Hendekhale(48 specimens)) and Amirkolaye(60 specimens) wetlands. About 2 g of each specimen's dorsal fin was removed, stored in 96% ethyl alcohol and transferred to the genetic laboratory of the International Sturgeon Research Institute. Genomic DNA was extracted using ammonium-acetate method. The quality and quantity of DNA was assessed using 1% agarose gel electrophoresis. Polymerase Chain Reaction (PCR) was conducted on the target DNA using 15 pairs of microsatellite primers. PCR products were electrophoresed on poly acryl amide gels (6%) that were stained that were stained using silver nitrate. DNA bands were analyzed with BioCapt software. Allele count and frequency, genetic diversity, expected and observed heterozygosity , allele number and the effective allele number, genetic similarity and genetic distance, Fst, Rst, Hardy Weinberg Equilibrium based on X2 and Analysis of Molecular Variance (AMOVA) at 10% confidence level was calculated using the Gene Alex software. Dendogram for genetic distances and identities were calculated using TFPGA program for any level of hierarchy. The results for P. fluviatilis showed that from 15 pair of primers that were examined 6 polymorphic and 7 monomorphic loci were produced, while 2 loci didn't produce any DNA bands. Mean allele number was 4.1±1.1 and mean observed and expected heterozygosity was 0.56±0.12 and 0.58±0.14 respectively. It was also seen that specimens from all regions were not in Hardy Weinberg Equilibrium in some of loci (P<0.001). Highest Fst (0.095) with Nm=2.37 was observed between Hendekhale and Amirkolaye and the lowest Fst (0.004) with Nm=59.31 was observed between Abkenar and Hendekhale. According to AMOVA Significant difference (P<0.05) was observed between recorded Rst in the studied regions in Anzali and Amirkolaye lagoons. In another words there are two distinct populations of this species in Anzali and Amirkolaye lagoons. The highest genetic distance (0.181) and lowest genetic resemblance (0.834) were observed between specimens from Hendekhale and Amirkolaye and the lowest genetic distance (0.099) and highest genetic 176 resemblance (0.981) were observed between specimens from Abkenar and Hendekhale. Based on the genetic dendogram tree derived by applying UPGMA algorithm, specimens from Anzali and Amirkolaye wetlands have the same ancestor. On the other hand there is no noticeable genetic distance between the specimens of these two regions. Also the results for S. lucioperca showed that from 15 pair of primers that were examined 6 polymorphic and 7 monomorphic loci were produced, while 2 loci didn't produce any DNA bands. Mean allele number was 3.0±0.6 and mean observed and expected heterozygosity was 0.52±0.21 and 0.50±0.14 respectively. It was also seen that specimens from all regions were not in Hardy Weinberg Equilibrium in some of loci (P<0.001). Highest Fst (0.093) with Nm=2.43 was observed between Aras dam and Anzali wetland and the lowest Fst (0.022) with Nm=11.27 was observed between Talesh and Chaboksar coasts. Significant differences (P<0.05) were observed between recorded Rst in the studied regions exept for Talesh and Chaboksar Coasts. In another words there are three distinct populations of this species in Caspian sea, Anzali wetland and Aras dam. Highest genetic distance (0.110) and lowest genetic resemblance (0.896) were observed between specimens from Aras dam and Anzali wetland and the lowest genetic distance (0.034) and highest genetic resemblance (0.966) were observed between specimens from Talesh and Chaboksar coasts. Based on the genetic dendogram tree derived by applying UPGMA algorithm, specimens from Talesh and Chaboksar coasts have the lowest genetic distance. On the other hand the main population of this species belongs to Anzali wetland. Phylogenetic relationship of these two species was inferred using mitochondrial cytochrome b gene sequencing. For this purpose 2 specimens of P. fluviatilis from Anzali wetland, 2 specimens of S. lucioperca from Aras dam and 2 specimens of S. lucioperca from Anzali wetland were sequenced and submitted in Gene Bank. These sequences were aligned with Clustal W. The phylogenic relationships were assessed with Mega 4. The results of evolutionary history studies of these species using Neighbor-Joining and Maximum Parsimony methods showed that the evolutionary origin of pikeperch in Aras Dam and Anzali wetland is common. On the other hand these two species had common ancestor in about 4 million years ago. Also different sequences of any region specimens are supposed as different haplotypes. 177 As a conclusion the results of this study showed that microsatellite and mtDNA sequencing methods respectively are effective in genetic structure and phylogenic studies of P. fluviatilis and S. lucioperca.

Characterization of genetic biodiversity of Nile perch, Lates niloticus, Tilapiines, Haplochromine flock and Ningu (Labeo victorianus) in the Victoria Lake Basin: an overview

Genetic biodiversity is the vaflatlOn among individuals within and between units of interbreeding individuals (populations) of a species. It includes inheritable and transmittable differences that occur between individuals andlor popuhitions of a given species through reproductive interaction. There exists enormous variability among individuals andlor populations of a species for most living organisms, and most of this variation is inheritable. differences among individuals arise through mutation and via recombination of genes during meiosis. These ifferences are then transmitted to successive generations through sexual reproduction and maintained in the populations through processes such as natural selection and genetic drift. Unfortunately much of this variation is normally threatened and often in danger of extinction because most focus in conservation of natural resources is put at saving species or habitats than varieties or strains of a species

Fishing gear selectivity of Lates niloticus L. (Nile perch), Oreochromis niloticus L. (Nile tilapia) and Rastrineobola argentea Pellegrin (Mukene) in lakes Victoria, Kyoga and Nabugabo

Catch effort data on which fisheries management regulations are sometimes based are not available for most lakes in Uganda. However, failure to regulate fishing gears and methods has been a major cause of collapse of fisheries in the country. Fisheries have been damaged by destructive and non-selective fishing gears and methods such as trawling and beach seining, by use of gill nets of mesh size which crop immature fish and by introduction of mechanised fishing. Selectivity of the gears used to crop Lates niloticus 1. (Nile perch), Oreochromis niloticus 1. (Nile tilapia) and Rastrineobola argentea (Mukene) which are currently the most important commercial species in Uganda were examined in order to recommend the most suitable types, sizes and methods that should be used in exploiting these fisheries . Gill nets of less than 127 mm mainly cropped immature Nile ti1apia and Nile perch. To protect these fisheries, the minimum mesh size of gill nets should be set at 127 mm. Seine nets of 5 mm do catch high proportions of immature Mukene while those of 10 mm catch mainly mature Mukene. When operated inshore, both sizes catch immature Nile perch and Nile ti1apia as by-catch. To protect the Mukene fishery and avoid catching immature byecatch, a minimum mesh size of the Mukene net should have been 10 mm operated as Lampara type net offshore but since most fishennen have been using the 5 mm seine for over five years the minimum size should not be allowed to drop below 5 mm pending further thorough investigations. Beach seining, trawling and are destructive to fisheries and should be prohibited until data that may justify their use is available.

The biology and ecology of the Nile perch, Lates niloticus, and the future of its fishery in Lakes Victoria, Kyoga and Nabugabo

Lakes Victoria, Kyoga and Nabugabo had a similar native fish fauna of high species diversity. stocks of most of the native species declined rapidly and some completely disappeared after Nile perch was introduced and became well established. Although, overexploitation of the fish stocks, competition between introduced and native tilapiines and environmental degradation contributed to the reduction in fish stocks, predation by the Nile perch has contributed much to the recent drastic reductions in fish stock and could even drive the stocks to a total collapse. Nile perch is also currently the most important commercial species in Lakes victoria, Kyoga and Nabugabo and the stability of its stocks is important in the overall sustainability of the fisheries of these lakes. The question that was to be examined in this paper was whether the fisheries of Lakes Victoria, Kyogaand Nabugabo would stabilize and sustain production in the presence of high predation pressure by the Nile perch or whether the Nile perch would drive the fish stocks including itself to a collapse. I t was assumed that Nile perch driven changes in Lakes Victoria, Kyoga and Nabugabo would be driven to a level beyond which they would not change further. This would be followed by recovery and stability or the changes would continue to a point of collapse. It was assumed that Lake Albert represented the ideal stable state. The changes in the new habitats expected to be driven through a major change due to Nile perch predation to a stage where there would be no further changes. After this, a feedback mechanism would move the driven variable towards recovery. The variables would then stabilize and oscillate will an amplitude which approximates to what would be recorded in Lake Albert. Alternatively, the changes would proceed to a stage where the fishery would collapse. The specific hypothesis was that fish species composition and diversity, prey selection by the Nile perch and life history characteristics of the Nile perch in the new habitats would change and stabilize

The Nile perch fishery: traditional and emerging fisheries, overfishing and the use of illegal gears on Lake Albert

The fisheries of Lake Albert have come under increasing focus due to several driving forces that have synergistically evolved resulting into concerns from diverse stakeholders. The driving forces include: the commercialization of the fisheries with entry into the value chain of industrial fish processing, a decline in fish stocks especially of the large-size fishes and the emergency of the light - fishing targeting small pelagic fishes. In addition, the assumption by some opinion leaders that light-fishing (use of light) has destroyed the Nile perch fishery of Lake Albert, other factors such as cross-border fishing conflicts, the emergence of oil, an influx of traders in fish-related activities, and the limited regulatory and enforcement regimes for the diverse commercially exploited fish fauna of Lake Albert all require continuous information and action.

Trolling for Nile perch (Lates niloticus) in Lake Kyoga

Nile perch were introduced into Lake Kyoga in the mid·1950s from Lake Albert. Murchison Falls on the River Nile, between the two lakes, prevented Nile Perch and other elements of the typical nilotic fish population from naturally reaching Lake Kyoga. The introduction has been successful and considerable stocks of Nile Perch now exist in Lake Kyoga. In 1967, 13,000 tons of Nile Perch were estimated to have been landed by the commercial fishermen, fish of 200 lb. being now caught and specimens of 100 lb. being fairly common. Large Nile perch are caught commercially on long lines baited with live Protopterus' spp. or Clarias spp. Large mesh gillnets uccasionally take Nile Perch of up to 30 lb., but the high cost of the nets does not, at the moment, appear to justify this method of fishing; a 10 in. net, stretched 100 yards long (unmounted). 15 meshes deep and 60-ply nylon. costs approximately U. Shs. 300. The long·lines used are extremely simple and cheap to make, but considerable labour is needed to catch bait. Small Protopterus are normally caught by turning over floating rafts of grasses and papyrus, and extracting the fish from the root mass; this is hard and dirty work. Other small fish, more readily available, do not, according to fishermen, work as well, possibly because they are not as durable as the Protopterus or Clarias. Dead bait is never used.

Fishing gear selectivity in relation to their manufacture and to the management of fisheries of the Nile perch, the Nile tilapia, and Rastrineobola argentea (Mukene) in Lakes Victoria and Kyoga

The fisheries of Lakes Victoria and Kyoga have changed from the native tilapiine species and are now dominated by two introduced species; Nile perch and Nile tilapia, and one native species; Rastrineobola argentea (mukene). Because of the differences in the size of the species, it may be necessary to change the type and sizes of nets used.

The Nile perch in Lakes Victoria and Kyoga: an asset or liability?

Combined effects of lack of firm and effective management measures for years, over exploitation with destructive fishing gears and interspecific competition, particularly among tilapiines and profound effects on the fish stocks of Lake Victoria and Kyoga. It has been proposed that these have been more important in the decline of the indigenous fisheries than predation or competition by Nile perch.

Growth rates of juvenile Nile perch, Lates niloticus L. in lakes Victoria, Kyoga and Nabugabo

The growth rates of Nile perch, Lates niloticus L. of 20 cm to 40 cm total length were estimated in lakes Victoria and Kyoga in 1991 and 1992 and Nabugabo in 1992 and 1993 by tagging. Fish grew faster in Lake Kyoga (mean growth rate 28.7 ± 1.3 cm S.E. per year, N = 49) than in Lake Victoria (18.9 ± 1.4 cm per year, N = 20) and Lake Nabugabo (19.0 ± 0.7 cm per year, N = 43). There were significant differences in growth rates between the lakes (F2 109 = 24.037, P < 0.001). Growth rates in Lake Kyoga were significantly higher than those of lak'es Victoria and Nabugabo (p < 0.001) but those of lakes Victoria and Nabugabo were not significantly different from each other (p = > 0.05). The faster growth rates in Lake Kyoga were attributed to improvement in food supply due to increases in stocks of haplochromine prey. Growth rates in Lake Kyoga were significantly higher, but those of lakes Victoria and Nabugabo were within the ranges of those reported in several native habitats of Nile perch.

Aspects of migration, size structure and mortality of juvenile Nile perch in the Mwanza Gulf of Lake Victoria

A detailed study of the early life of fishes forms one of the very important aspects with respect to recruitment mechanism and proper uneterstanding of the dynamics leading to sustainance of fish populations. It should be the central theme of the fisheries biologist and managers to extract the bilogical information relevant to the proper understanding of this part of the population. A number of studies in the Mwanza gulf and Lake Victoria have emphasized the need to monitor the fishery by conducting observations of stock size, migration, catch effort data and growth of big specimen (Acere 1981, Goudsward et al 1984, Asila. Ogari 1988 and Okemwa 1984). The present paper discusses the preliminary information on the size structure, mortality and migration of juvenile Nile perch. The long term objectives of the programme is aimed at describing the size structure, growth, mortality, recruitment pattern and population dynamics of the Nile perch up to 30 cm total length in the, Mwanza Gulf.

Investigations of the present factors affecting the population characteristics and relative abundance of nile perch (Lates niloticus) at selected trawling sites of western part of Lake Victoria, Uganda, Kagegi Gulf

This report is based on the investigation of the factors affecting population characteristics and relative abundance of Nile perch in selected sites of Kagegi Gulf Lake Victoria Uganda in the month of November 2006. Nine (9) stations were sampled at depth strata of 0-10, 10-20, 20-30 and 30-40 m the mean catch rates were as follows; 8.75±5.5, 4.77±2.3, 6.33±0.3 and 1.34±1.1 tonnes per square kilometer respectively. The catch rates differed at various depth levels with p-value of 0.2940 at 5% level of significance. Limnological parameters were temperature 25.15±0.28, 23.68±0.20, 24.74±0.13 and 25.3±0.20°C; pH of 8.0±0.00, 7.7±0.11; 7.66±0.33 and 6.32±0.14, dissolved oxygen 7.37±0.24, 6.44±0.30, 6.32±0.14 and 6.22±0.14 mg/l; Total nitrogen 589.82±97.2, 514.34±68.8, 690.44±257.8 and 809.03±45.02 µgL-respectively with a p-value of 0.4392 at 5% level of significance. Prey type of Nile perch indicated 65.2% of haplochromine in 0-10 m depth and other strata >10 metre were dominated by Caridina nilotica. Generally investigations indicated that the catch rates of Nile perch at Kagegi gulf in various depth strata probably depended on both the physical and chemical parameters mentioned above.

The effect of hook size on the catch rate and size of the Nile perch Lates niloticus (Linne) fishery in the Napoleon Gulf, Lake Victoria, Uganda

This study was undertaken in Napoleon gulf, Lake Victoria Uganda from July – December 2009. It was conducted in four landing sites; Bukaya (0.41103N, 33.19133E), Bugungu (0.40216N, 33.2028E), Busana (0.39062N, 33.25228E) and Kikondo (0.3995N, 33.21848E) all from Buikwe district (Formerly part of Mukono district). The main aim was to determine the effect of both hook size and bait type on the catch rate (mean weight) and size composition of Nile perch (Lates niloticus) (LINNE) fishery in the Napoleon Gulf, Lake Victoria. The main hook sizes investigated during the experiment were 7, 8, 9, 10, 11 and 12 that were dominantly used in harvesting Nile perch in Napoleon Gulf, Lake Victoria. In this study length, weight and bait type data were collected on site from each boat at that particular fishing spot; since most fishermen in the Napoleon Gulf could sell their fish immediately the catch is caught there and then. The results indicated a total of 873 Nile perch fish samples collected during the study. Statistical tests, descriptive statistics, regression and correlation were all carried out using the Statistical Package for the Social Sciences (SPSS) in addition to Microsoft excel. The bait types in the Gulf ranged from 5-10 cm Total length (TL) haplochromine, 24.5-27 cm TL Mormyrus kannume and 9-24 cm TL Clarias species. The bait types had a significant effect on the catch rate and also on the size composition the fish harvested measured as Total length (ANCOVA F=8.231; P<0.05) despite the fact that bait type had no influence on mean weight of fish captured (ANCOVA F=2.898; P>0.05). Hook sizes used by the fishers had a significant effect on the both the size (TL) composition (ANCOVA F=3.847; P<0.05) and the mean weight (ANCOVA F=4.599; P<0.005) of the Nile perch captured. Investigations indicated hook sizes seven (7) and eight (8) were the ones that harvested the Nile perch above the slot size of 50 cm total length. In general hook sizes indicated to be the main drive in the harvesting of the Nile perch though bait type also contributed toward that. Generally there is need for management to put a law in place on the minimum hook size to be used on the harvesting of the Nile perch and also monitored by the Fisheries Management as a regulatory measure. In addition to that aquaculture should be encouraged to farm the fish for bait at a higher scale in the region in order to avoid depleting the wild stocks already in danger of extinction. Through this kind of venture, both biodiversity conservation and environmental sustainability will be observed in the Lake Victoria basin.

An assessment of the impact of the Nile perch on the fisheries of Lakes Victoria and Kyoga

The combined effects of lack of effective management measures, over-exploitation with destructive fishing gears, and interspecific competition, particularly among tilapiines have had profound effects on the fish stocks of Lakes Victoria and Kyoga. It has been proposed that these have been more important in the decline of the indigenous fisheries than predation or competition from Nile perch. The purpose of this paper is to provide an assessment of the dramatic changes in the fisheries of Lakes Victoria and Kyoga . Both lakes have experienced almost similar changes for which Lates could not have been wholly responsible.

Impact of stability in prey supply to the stocks of the Nile perch in Lakes Victoria, Kyoga and Nabugabo

The food of the Nile perch has changed since its introduction into Lakes Victoria, Kyoga and Nabugabo and stabilized on Caridina nilotica, Anisopteran nymphs, Rastrineobola argentea, Nile perch juveniles, and tilapiines. For the Nile perch to sustain production in these lakes, its is important that these prey species are properly managed.

SAMUDRA Report, No. 48, November 2007

Misconceptions, Outright Prejudice - Fishing rights. The Dilemma of the Nile Perch - Africa: Ecolabelling. Fishing Safely - Analysis: Safety at Sea. Shoring Up - Labour: Shore-based Workers. A Sustainable, Equitable, Small-scale Fisheries - Document: Traditional Communities. Getting Their Act Together - India: Co-management. Certifying the Uncertifiable? - Report: Industrial Aquaculture. Shocking Reality - Cambodia: Electro-fishing. Be Consultative, Participatory - Document: Indigenous Peoples. Towing the Line - Peru: Artisanal Shark Fishery. Declaration of Charter. (56 pp.)