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Source of the Nile Fish farm (SON) is located at Bugungu area in Napoleon Gulf, northern Lake Victoria. The proprietors of the farm requested for technical assistance of NaFIRRI to undertake regular environment monitoring of the cage site as is mandatory under the NEMA conditions. As the SON is a key collaborator/client of the institute, NAFIRRI agreed to undertake the assignment subject to facilitation by the client. The institute agreed to conduct quarterly surveys of key environmental parameters at the site including selected physical-chemical and biological factors, nutrient status, column depth, water transparency and sedimentation. Samples and field measurements were to be taken at 3 sites: within and/or close to the fish cages (WIC), upstream (USC) and downstream (DSC) of the cages. The first environmental monitoring survey was undertaken in February 2011; the second in May 2011 and the third in September 2011. The surveys cover physical-chemical parameters, nutrient status, invertebrate and fish communities. The present report presents field observations made for the fourth quarter survey undertaken in November 2011 and provides a scientific interpretation and discussion of the results with reference to possible impacts of the cage facilities to the water environment and the different aquatic biota at and around the cage site including natural fish communities.

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Class Condrichthyes consist of two sub-classes: Holocehali and. Elasmobranchii, the second one are more divers and has more importance. Selachimorpha (sharkes) and Batidoidimorpha (rays and skates) are two super-order of Elasmobranchii, which they have crucial role in ecological balance in marine ecosystmes. Except few cases, most of sharks and rays (rays and skates) are not well identified, so a lot of works need to be done in this regards. The area of study is located between 49°, 35' and 52°, 33' E and between 27°, 21' and 30°, 02' N in depth of 7 to 78 in. Study were conducted diuring August 1998, September 1999. Samples were taken during 3 sea cruises from 70 bottom trawl net. All sharks and batoid fishes were identified based on biometric specifications (weight, total, length and sexuality for both group and extra biometric specifications, disc width, disc length, and tail length only for, batoid fishes). The 1140 specimens of batoid fishes identified belonged to 6 families, and 18 species. 3 new species were identified, they are Himantura sp.1 and Himantura sp.2 belonged to Dasyatidae family and Rhinobatos sp. belonged to Rhinobatidae Familiy. It needs more works and more adaquate ducuments for cl.earfing scientific names of these species. The 275 specimens of sharks identified belonged to 6 families and 10 species. Chiloscyllium sp. belonged to Hemiscylliidae, family as a new species was identified.

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Rastrineobola argentea, local name.s Mukene (Uganda) Omena (Kenya) and Dagaa (Tanzania) occurs in lakes Victoria, Kyoga and Nabugabo (Greenwood 1966). Until the decline of the native fishes especially the haplochromines, R. argentea was of little economic importance to the fisheries of these lakes. The stocks of this species have now increased and commercial catches on Lake Victoria account for over 30%. Fishing for R. argentea is currently still restricted to inshore areas and within the fringing islands of Lake Victoria. This fishery is not yet established on Lakes Kyoga and Nabugabo although the species is quite abundant in these lakes (Proude 1963). On moonless nights, kerosene pressure lamps are exposed on the lake to attract the fishes. These fishes are then fished out using fine meshed seine, lampara or lift nets

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Prior to introduction of non-native fish species into Lakes Victor i a, Kyoga and Nabugabo, the three lakes suppor ted diverse fish fauna representing 13 families consisting of six cichlid genera and fifteen non-cichlid genera. There were about 50 non-cichlid species and over 300 cichlids consisting of mainly haplochromines (Graham 1929, worthington 1929, Greenwood 1960). Many of the species were commercially and scientifically important and provided a rich variety of protein source to choose from. Following introduction of the Nile perch and several tilapiines species, most of the native species were drastically reduced and some have apparently disappeared. The few remaining species appear to be restricted in distribution due to the presence of the Nile perch. They are mainly confined to refugia such as marginal macrophytes, rocky outcrops and small satellite lakes which are separated from the areas of introduction by swamps

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Oreochromis niloticus (the Nile tilapia) and three other ti1apine species: Oreochromis leucostictus, Tilapia zi11ii and T. rendallii were introduced into Lakes Victoria, Kyoga and Nabugabo in 1950s and 1960s. The source and foci of the stockings are given by Welcomme (1966) but the origin of the stocked species was Lake Albert. The Nile tilapia was introduced as a management measure to relieve fishing pressure on the endemic tiapiines and, since it grows to a bigger size, to encourage a return to the use of larger mesh gill nets. Ti1apia zillii was introduced to fill a vacant ,niche of macrophytes which could not be utilised' by the other tilapiines. Tilapia rendallii, and possibly T. leucosticutus could been introduced into these lakes accidently as a consquence of one of the species being tried out for aquaculture. The Nile perch and Nile tilapia have since fully established themselves and presently dominate the commercial fisheries of Lakes Victoria and Kyoga. The original fisheries based on the endemic tilapiines O. escu1entus and o. variabilis have collapsed. It is hypothesized that the ecological and limnological changes that are observed in Lakes Victoria and Kyoga are due to a truncation of the original food webs of the two lakes. Under the changed conditions, O. niloticus to be either playing a stabilizing role or fuelling nutrient turnover in the lakes. Other testable hypotheses point to the possible role of predation by the Nile perch, change in regional climate and hydrology in the lake basins.

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Haplochrmine cichlids were the most abundant taxa in Lakes Victoria, Kyoga and Nabugabo prior to introduction of the Nile perch. As stocks of the introduced predator increased, these taxa were depleted to such an extent that they are now virtually absent from the lake. The haplochromine cichlids played an important role in the ecology of Lakes Victoria, Kyoga and Nabugabo. They occupied virtually all trophic levels in the lake and facilitated an efficient flow of energy through the ecosystem. Their depletion seem to have left much organic matter whose decomposition has contributed to accumulation of dead organic matter which may be contributing to prolonged anoxia in Lake Victoria. The haplochromines formed an important small-scale fishery. Fishermen formerly subsisting on this fishery have been driven out of business because they cannot afford the expensive nets required for Nile perch fishery. In addition to providing a cheap source of fish protein to humans, the species were an important source of Scientific material for students of genetics antd adaptive radiation.